Pregenerated sensors for LINC02663 (Homo sapiens)
Ensembl gene IDs: ENSG00000228636Ensembl transcript IDs: ENST00000419836.1, ENST00000647601.1, ENST00000659451.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GATCGCGAGCAGCCCGAGCCGGTCCTGGCAGCTCAAGGTGCCAGGTaGCACCCAGTCCTGAACAGGACACCGTTCCATCACAGGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DREQPEPVLAAQGAR*HPVLNRTPFHHREH Trigger: GTGCTCCCTGTGATGGAACGGTGTCCTGTTCAGGACTGGGTGCCACCTGGCACCTTGAGCTGCCAGGACCGGCTCGGGCTGCTCGCGATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647601.1 |
||
| CDS GCA 90 bp | AGTTTGGGATCGCGAGCAGCCCGAGCCGGTCCTGGCAGCTCAAGGTaGCAGGTGGCACCCAGTCCTGAACAGGACACCGTTCCATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SLGSRAARAGPGSSR*QVAPSPEQDTVPSQ Trigger: CTGTGATGGAACGGTGTCCTGTTCAGGACTGGGTGCCACCTGGCACCTTGAGCTGCCAGGACCGGCTCGGGCTGCTCGCGATCCCAAACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647601.1 |
||
| CDS CCA 90 bp | TTGGCCGGTTTGTTCCTCCTGATACTTCTCTCCTTGGTGGGCGGATaGCCGTCCTCGTTCTTAGCATCCTTGCAGGGCCTTTCCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGLFLLILLSLVGG*PSSFLASLQGLSSL Trigger: CAAAGAGGAAAGGCCCTGCAAGGATGCTAAGAACGAGGACGGCCATCCGCCCACCAAGGAGAGAAGTATCAGGAGGAACAAACCGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419836.1 ENST00000659451.1 |
||
| CDS GCA 72 bp | TCGCGAGCAGCCCGAGCCGGTCCTGGCAGCTCAAGGTaGCAGGTGGCACCCAGTCCTGAACAGGACACCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRAARAGPGSSR*QVAPSPEQDTV Trigger: AACGGTGTCCTGTTCAGGACTGGGTGCCACCTGGCACCTTGAGCTGCCAGGACCGGCTCGGGCTGCTCGCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647601.1 |
||
| CDS CCA 72 bp | CAGCCCGAGCCGGTCCTGGCAGCTCAAGGTGCCAGGTaGCACCCAGTCCTGAACAGGACACCGTTCCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: QPEPVLAAQGAR*HPVLNRTPFHH Trigger: GTGATGGAACGGTGTCCTGTTCAGGACTGGGTGCCACCTGGCACCTTGAGCTGCCAGGACCGGCTCGGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647601.1 |
||
| CDS TCA 72 bp | CACTCACCCACACACCTGTTACAGGTAGTTAGGCAATaGGCGGGGCAGGAGAGGGCTCTCTCCCACCCGCTA | + |
|
Preference number: 6 (lower is better) Translates to: HSPTHLLQVVRQ*AGQERALSHPL Trigger: TAGCGGGTGGGAGAGAGCCCTCTCCTGCCCCGCTCATTGCCTAACTACCTGTAACAGGTGTGTGGGTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647601.1 |
||
| CDS CAA 72 bp | TTGGTGGGCGGATGGCCGTCCTCGTTCTTAGCATCCTaGCAGGGCCTTTCCTCTTTGCATGTGCATTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVGGWPSSFLAS*QGLSSLHVHCW Trigger: CCAGCAATGCACATGCAAAGAGGAAAGGCCCTGCAAGGATGCTAAGAACGAGGACGGCCATCCGCCCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419836.1 ENST00000659451.1 |
||
| CDS CAA 72 bp | GTGTTGGCCGGTTTGTTCCTCCTGATACTTCTCTCCTaGGTGGGCGGATGGCCGTCCTCGTTCTTAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: VLAGLFLLILLS*VGGWPSSFLAS Trigger: GGATGCTAAGAACGAGGACGGCCATCCGCCCACCAAGGAGAGAAGTATCAGGAGGAACAAACCGGCCAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419836.1 ENST00000659451.1 |
||
| CDS CAA 90 bp | AAGATCAAGGTGTTGGCCGGTTTGTTCCTCCTGATACTTCTCTCCTaGGTGGGCGGATGGCCGTCCTCGTTCTTAGCATCCTTGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KIKVLAGLFLLILLS*VGGWPSSFLASLQG Trigger: GCCCTGCAAGGATGCTAAGAACGAGGACGGCCATCCGCCCACCAAGGAGAGAAGTATCAGGAGGAACAAACCGGCCAACACCTTGATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419836.1 ENST00000659451.1 |
||
| CDS CCA 72 bp | TTGTTCCTCCTGATACTTCTCTCCTTGGTGGGCGGATaGCCGTCCTCGTTCTTAGCATCCTTGCAGGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFLLILLSLVGG*PSSFLASLQGL Trigger: AAGGCCCTGCAAGGATGCTAAGAACGAGGACGGCCATCCGCCCACCAAGGAGAGAAGTATCAGGAGGAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419836.1 ENST00000659451.1 |
||
| CDS CAA 72 bp | GGAGGCTGGAAGTCCAAGATCAAGGTGTTGGCCGGTTaGTTCCTCCTGATACTTCTCTCCTTGGTGGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGWKSKIKVLAG*FLLILLSLVGG Trigger: TCCGCCCACCAAGGAGAGAAGTATCAGGAGGAACAAACCGGCCAACACCTTGATCTTGGACTTCCAGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419836.1 ENST00000659451.1 |
||
| CDS CAA 72 bp | GCAGGGCCTTTCCTCTTTGCATGTGCATTGCTGGTGTaGCTCTCTCTTCTCACAAGGCCACTAGTCCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AGPFLFACALLV*LSLLTRPLVLL Trigger: CAACAGGACTAGTGGCCTTGTGAGAAGAGAGAGCAACACCAGCAATGCACATGCAAAGAGGAAAGGCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659451.1 |
||
| CDS CAA 90 bp | CTCGTTCTTAGCATCCTTGCAGGGCCTTTCCTCTTTGCATGTGCATaGCTGGTGTTGCTCTCTCTTCTCACAAGGCCACTAGTCCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVLSILAGPFLFACA*LVLLSLLTRPLVLL Trigger: CAACAGGACTAGTGGCCTTGTGAGAAGAGAGAGCAACACCAGCAATGCACATGCAAAGAGGAAAGGCCCTGCAAGGATGCTAAGAACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659451.1 |
||
| CDS CAA 72 bp | AGCATCCTTGCAGGGCCTTTCCTCTTTGCATGTGCATaGCTGGTGTTGCTCTCTCTTCTCACAAGGCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: SILAGPFLFACA*LVLLSLLTRPL Trigger: TAGTGGCCTTGTGAGAAGAGAGAGCAACACCAGCAATGCACATGCAAAGAGGAAAGGCCCTGCAAGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659451.1 |
||
| CDS CAA 72 bp | TCCTCGTTCTTAGCATCCTTGCAGGGCCTTTCCTCTTaGCATGTGCATTGCTGGTGTTGCTCTCTCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSFLASLQGLSS*HVHCWCCSLFS Trigger: TGAGAAGAGAGAGCAACACCAGCAATGCACATGCAAAGAGGAAAGGCCCTGCAAGGATGCTAAGAACGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419836.1 ENST00000659451.1 |
||
| CDS CCA 72 bp | CAGCAATTATCGCATTGCCTCTCTAAAAATGATAATTaGGCAGCCAGGGAGAGAAAATCTCCTCAAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QQLSHCLSKNDN*AARERKSPQGP Trigger: TGGACCTTGAGGAGATTTTCTCTCCCTGGCTGCCCAATTATCATTTTTAGAGAGGCAATGCGATAATTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000647601.1 |
||