Pregenerated sensors for LINC02662 (Homo sapiens)
Ensembl gene IDs: ENSG00000231326Ensembl transcript IDs: ENST00000418524.6, ENST00000436003.3
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AACCGACCAGGGCACCAGACTGGGTGTGGGCTCTGCCAGCCTCCCTaGCAAGTGGGCTGGGTTTTGCGCTCCCTCGTGTCGTTGGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: NRPGHQTGCGLCQPP*QVGWVLRSLVSLVA Trigger: GGCCACCAACGACACGAGGGAGCGCAAAACCCAGCCCACTTGCCAGGGAGGCTGGCAGAGCCCACACCCAGTCTGGTGCCCTGGTCGGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS CCA 90 bp | CAGGGCACCAGACTGGGTGTGGGCTCTGCCAGCCTCCCTGGCAAGTaGGCTGGGTTTTGCGCTCCCTCGTGTCGTTGGTGGCCACAGTTT | + |
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Preference number: 5 (lower is better) Translates to: QGTRLGVGSASLPGK*AGFCAPSCRWWPQF Trigger: AAACTGTGGCCACCAACGACACGAGGGAGCGCAAAACCCAGCCCACTTGCCAGGGAGGCTGGCAGAGCCCACACCCAGTCTGGTGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS CCA 90 bp | CACCAGACTGGGTGTGGGCTCTGCCAGCCTCCCTGGCAAGTGGGCTaGGTTTTGCGCTCCCTCGTGTCGTTGGTGGCCACAGTTTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: HQTGCGLCQPPWQVG*VLRSLVSLVATVSN Trigger: ATTTGAAACTGTGGCCACCAACGACACGAGGGAGCGCAAAACCCAGCCCACTTGCCAGGGAGGCTGGCAGAGCCCACACCCAGTCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS CCA 90 bp | GCGGAGGCTCTGAATGGAGAAAGTCGTCGATGCCTGCACTGGTCTTaGCCTGTTCTTTATGTTCCGCGCGGTGACAGCTTCCACGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: AEALNGESRRCLHWS*PVLYVPRGDSFHVS Trigger: GGAGACGTGGAAGCTGTCACCGCGCGGAACATAAAGAACAGGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418524.6 |
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| CDS CCA 90 bp | GGATGCGCGGAGGCTCTGAATGGAGAAAGTCGTCGATGCCTGCACTaGTCTTGGCCTGTTCTTTATGTTCCGCGCGGTGACAGCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: GCAEALNGESRRCLH*SWPVLYVPRGDSFH Trigger: GTGGAAGCTGTCACCGCGCGGAACATAAAGAACAGGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTCCGCGCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418524.6 |
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| CDS CCA 90 bp | GCGGAGGCTCTGAATGGAGAAAGTCGTCGATGCCTGCACTGGTCTTaGCCTGTTCTTTATGTTCCGCGCGGTGACAGCTTCAAACCAGTG | + |
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Preference number: 5 (lower is better) Translates to: AEALNGESRRCLHWS*PVLYVPRGDSFKPV Trigger: CACTGGTTTGAAGCTGTCACCGCGCGGAACATAAAGAACAGGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436003.3 |
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| CDS CCA 90 bp | GGATGCGCGGAGGCTCTGAATGGAGAAAGTCGTCGATGCCTGCACTaGTCTTGGCCTGTTCTTTATGTTCCGCGCGGTGACAGCTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: GCAEALNGESRRCLH*SWPVLYVPRGDSFK Trigger: TTTGAAGCTGTCACCGCGCGGAACATAAAGAACAGGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTCCGCGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436003.3 |
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| CDS GCA 90 bp | ATTTATTTGGGATGCGCGGAGGCTCTGAATGGAGAAAGTCGTCGATaGCTGCACTGGTCTTGGCCTGTTCTTTATGTTCCGCGCGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: IYLGCAEALNGESRR*LHWSWPVLYVPRGD Trigger: GTCACCGCGCGGAACATAAAGAACAGGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTCCGCGCATCCCAAATAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS TCA 90 bp | TCTCCCGGGAACAGAGCCTGTAACGTTATTCAGCACACCTTCTGTTaGGCAGAGCACCTGACTTCAAGGAATGTACAACGGCTTGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: SPGNRACNVIQHTFC*AEHLTSRNVQRLAL Trigger: AAGGGCAAGCCGTTGTACATTCCTTGAAGTCAGGTGCTCTGCTCAACAGAAGGTGTGCTGAATAACGTTACAGGCTCTGTTCCCGGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418524.6 |
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| CDS TCA 90 bp | GAGCCTGTAACGTTATTCAGCACACCTTCTGTTGAGCAGAGCACCTaGCTTCAAGGAATGTACAACGGCTTGCCCTTCAAACCAGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: EPVTLFSTPSVEQST*LQGMYNGLPFKPVC Trigger: ACACACTGGTTTGAAGGGCAAGCCGTTGTACATTCCTTGAAGTCAGGTGCTCTGCTCAACAGAAGGTGTGCTGAATAACGTTACAGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418524.6 |
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| CDS TCA 90 bp | TTGCACGTTTTGATGTGTTTATTTATTTGGGATGCGCGGAGGCTCTaGATGGAGAAAGTCGTCGATGCCTGCACTGGTCTTGGCCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LHVLMCLFIWDARRL*MEKVVDACTGLGLF Trigger: GAACAGGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTCCGCGCATCCCAAATAAATAAACACATCAAAACGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS GCA 90 bp | CATTTACAAGTAGGAGTACTGATCTTACTCTCCTCTTACAGAGCTTaGATGATGATGCCGCACACTGAAATGCTTTCTCAGCATTCCACC | + |
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Preference number: 5 (lower is better) Translates to: HLQVGVLILLSSYRA*MMMPHTEMLSQHST Trigger: GGTGGAATGCTGAGAAAGCATTTCAGTGTGCGGCATCATCATGCAAGCTCTGTAAGAGGAGAGTAAGATCAGTACTCCTACTTGTAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000436003.3 |
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| CDS CCA 72 bp | GGGTGTGGGCTCTGCCAGCCTCCCTGGCAAGTGGGCTaGGTTTTGCGCTCCCTCGTGTCGTTGGTGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: GCGLCQPPWQVG*VLRSLVSLVAT Trigger: TGTGGCCACCAACGACACGAGGGAGCGCAAAACCCAGCCCACTTGCCAGGGAGGCTGGCAGAGCCCACACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS CAA 90 bp | ACTGGGTGTGGGCTCTGCCAGCCTCCCTGGCAAGTGGGCTGGGTTTaGCGCTCCCTCGTGTCGTTGGTGGCCACAGTTTCAAATCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: TGCGLCQPPWQVGWV*RSLVSLVATVSNLL Trigger: AAGCAGATTTGAAACTGTGGCCACCAACGACACGAGGGAGCGCAAAACCCAGCCCACTTGCCAGGGAGGCTGGCAGAGCCCACACCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS GCA 72 bp | GGATGCGCGGAGGCTCTGAATGGAGAAAGTCGTCGATaGCTGCACTGGTCTTGGCCTGTTCTTTATGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: GCAEALNGESRR*LHWSWPVLYVP Trigger: CGGAACATAAAGAACAGGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTCCGCGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS CCA 72 bp | GAGGCTCTGAATGGAGAAAGTCGTCGATGCCTGCACTaGTCTTGGCCTGTTCTTTATGTTCCGCGCGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: EALNGESRRCLH*SWPVLYVPRGD Trigger: GTCACCGCGCGGAACATAAAGAACAGGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS CCA 72 bp | GGCAAGTGGGCTGGGTTTTGCGCTCCCTCGTGTCGTTaGTGGCCACAGTTTCAAATCTGCTTCCTGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GKWAGFCAPSCR*WPQFQICFLFS Trigger: AGAAAACAGGAAGCAGATTTGAAACTGTGGCCACCAACGACACGAGGGAGCGCAAAACCCAGCCCACTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS CCA 72 bp | CTGAATGGAGAAAGTCGTCGATGCCTGCACTGGTCTTaGCCTGTTCTTTATGTTCCGCGCGGTGACAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LNGESRRCLHWS*PVLYVPRGDSF Trigger: GAAGCTGTCACCGCGCGGAACATAAAGAACAGGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS CAA 72 bp | TGGCAAGTGGGCTGGGTTTTGCGCTCCCTCGTGTCGTaGGTGGCCACAGTTTCAAATCTGCTTCCTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: WQVGWVLRSLVS*VATVSNLLPVF Trigger: GAAAACAGGAAGCAGATTTGAAACTGTGGCCACCAACGACACGAGGGAGCGCAAAACCCAGCCCACTTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS CCA 72 bp | TGTGTTTATTTATTTGGGATGCGCGGAGGCTCTGAATaGAGAAAGTCGTCGATGCCTGCACTGGTCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: CVYLFGMRGGSE*RKSSMPALVLA Trigger: GGCCAAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTCCGCGCATCCCAAATAAATAAACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS TCA 72 bp | ACGTTATTCAGCACACCTTCTGTTGAGCAGAGCACCTaGCTTCAAGGAATGTACAACGGCTTGCCCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TLFSTPSVEQST*LQGMYNGLPFK Trigger: TTTGAAGGGCAAGCCGTTGTACATTCCTTGAAGTCAGGTGCTCTGCTCAACAGAAGGTGTGCTGAATAACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418524.6 |
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| CDS TCA 72 bp | AACAGAGCCTGTAACGTTATTCAGCACACCTTCTGTTaGGCAGAGCACCTGACTTCAAGGAATGTACAACGG | + |
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Preference number: 6 (lower is better) Translates to: NRACNVIQHTFC*AEHLTSRNVQR Trigger: CCGTTGTACATTCCTTGAAGTCAGGTGCTCTGCTCAACAGAAGGTGTGCTGAATAACGTTACAGGCTCTGTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418524.6 |
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| CDS TCA 72 bp | TTGATGTGTTTATTTATTTGGGATGCGCGGAGGCTCTaGATGGAGAAAGTCGTCGATGCCTGCACTGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LMCLFIWDARRL*MEKVVDACTGL Trigger: AAGACCAGTGCAGGCATCGACGACTTTCTCCATTCAGAGCCTCCGCGCATCCCAAATAAATAAACACATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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| CDS GCA 72 bp | GTAGGAGTACTGATCTTACTCTCCTCTTACAGAGCTTaGATGATGATGCCGCACACTGAAATGCTTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VGVLILLSSYRA*MMMPHTEMLSQ Trigger: CTGAGAAAGCATTTCAGTGTGCGGCATCATCATGCAAGCTCTGTAAGAGGAGAGTAAGATCAGTACTCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418524.6 ENST00000436003.3 |
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