Pregenerated sensors for LINC02660 (Homo sapiens)
Ensembl gene IDs: ENSG00000226005Ensembl transcript IDs: ENST00000432452.2, ENST00000648503.1, ENST00000655417.1, ENST00000656136.1, ENST00000657212.1, ENST00000664393.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACCATCTCCATTCTGGACGGCATCCATGTGCTCCGAAAGCTCTCCTaGTTCCTCTCAGACTTCCCAACCATCTCTTCCCCAGGGCACCCG | + |
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Preference number: 5 (lower is better) Translates to: TISILDGIHVLRKLS*FLSDFPTISSPGHP Trigger: CGGGTGCCCTGGGGAAGAGATGGTTGGGAAGTCTGAGAGGAAGCAGGAGAGCTTTCGGAGCACATGGATGCCGTCCAGAATGGAGATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000656136.1 ENST00000664393.1 |
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| CDS GCA 90 bp | CCCAGGGCACCCGTGGGATCCAACGGCATGAACCTCATCACCTTATaGCTACTGAAGGCCCTGCTTGTCTTCCTAATGCTCCAGGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: PRAPVGSNGMNLITL*LLKALLVFLMLQVC Trigger: ACAAACCTGGAGCATTAGGAAGACAAGCAGGGCCTTCAGTAGGCATAAGGTGATGAGGTTCATGCCGTTGGATCCCACGGGTGCCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656136.1 |
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| CDS GCA 90 bp | CCCAGGGCACCCGTGGGATCCAACGGCATGAACCTCATCACCTTATaGCTACTGAAGGCCCTGCTTGTCTTCCTAATGCTAATCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: PRAPVGSNGMNLITL*LLKALLVFLMLISA Trigger: AGCAGAGATTAGCATTAGGAAGACAAGCAGGGCCTTCAGTAGGCATAAGGTGATGAGGTTCATGCCGTTGGATCCCACGGGTGCCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000664393.1 |
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| CDS CCA 90 bp | GCCTGGATGACAGAGCAAGACCAATCTCTGCTGCACATCTGCCCATaGAACAATGGCACTCCGAGCTCCTGCTCCAGATCCTCATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: AWMTEQDQSLLHICP*NNGTPSSCSRSSSS Trigger: TGAAGATGAGGATCTGGAGCAGGAGCTCGGAGTGCCATTGTTCCATGGGCAGATGTGCAGCAGAGATTGGTCTTGCTCTGTCATCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657212.1 |
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| CDS CCA 90 bp | GCAAACTCGGCGGCCTGGACCTCCAAATGTATCCTGACTCCGAGCTaGGTGATTTCTTTTTCTTCCGAGCCACAACCATCTCCATTCTGG | + |
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Preference number: 5 (lower is better) Translates to: ANSAAWTSKCILTPS*VISFSSEPQPSPFW Trigger: CCAGAATGGAGATGGTTGTGGCTCGGAAGAAAAAGAAATCACCCAGCTCGGAGTCAGGATACATTTGGAGGTCCAGGCCGCCGAGTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000656136.1 ENST00000664393.1 |
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| CDS GCA 90 bp | TTTTCTTCCGAGCCACAACCATCTCCATTCTGGACGGCATCCATGTaGTCCGAAAGCTCTCCTGCTTCCTCTCAGACTTCCCAACCATCT | + |
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Preference number: 5 (lower is better) Translates to: FSSEPQPSPFWTASM*SESSPASSQTSQPS Trigger: AGATGGTTGGGAAGTCTGAGAGGAAGCAGGAGAGCTTTCGGAGCACATGGATGCCGTCCAGAATGGAGATGGTTGTGGCTCGGAAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000656136.1 ENST00000664393.1 |
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| CDS CCA 90 bp | AGCTGGGTGATTTCTTTTTCTTCCGAGCCACAACCATCTCCATTCTaGACGGCATCCATGTGCTCCGAAAGCTCTCCTGCTTCCTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SWVISFSSEPQPSPF*TASMCSESSPASSQ Trigger: CTGAGAGGAAGCAGGAGAGCTTTCGGAGCACATGGATGCCGTCCAGAATGGAGATGGTTGTGGCTCGGAAGAAAAAGAAATCACCCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000656136.1 ENST00000664393.1 |
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| CDS CCA 90 bp | TTTCCTTTCTGGTGCCTATCTTCCCCACCAGCAAACTCGGCGGCCTaGACCTCCAAATGTATCCTGACTCCGAGCTGGGTGATTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: FPFWCLSSPPANSAA*TSKCILTPSWVISF Trigger: AAAAGAAATCACCCAGCTCGGAGTCAGGATACATTTGGAGGTCCAGGCCGCCGAGTTTGCTGGTGGGGAAGATAGGCACCAGAAAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000656136.1 ENST00000664393.1 |
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| CDS TCA 90 bp | GGACACATCTCAAAACTATTAACTCCCCAGAATGATCCACAGTGTTaGTTCTCGGGTGGATGCTCCCAGTGTTTCCTCCTTCAGAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: GHISKLLTPQNDPQC*FSGGCSQCFLLQRK Trigger: CTTTCTCTGAAGGAGGAAACACTGGGAGCATCCACCCGAGAATCAACACTGTGGATCATTCTGGGGAGTTAATAGTTTTGAGATGTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000432452.2 ENST00000655417.1 ENST00000657212.1 |
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| CDS TCA 90 bp | TTCTATCATTGGAAGTGGAAGAATTTTCCACCTGGGGATTTCACCTaGATGGCACCTTTGGCCATTACCTGGCTCTTAGGATCAGCATGG | + |
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Preference number: 5 (lower is better) Translates to: FYHWKWKNFPPGDFT*MAPLAITWLLGSAW Trigger: CCATGCTGATCCTAAGAGCCAGGTAATGGCCAAAGGTGCCATTCAGGTGAAATCCCCAGGTGGAAAATTCTTCCACTTCCAATGATAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS TCA 90 bp | AAGAATGCCTTTTTGGCAAATTTAAAAGTCAGCCTTGACGTCAAGTaGCTCCTGAGAAGGCTCCGCATTGAGTTCTGTGAAGCGTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: KNAFLANLKVSLDVK*LLRRLRIEFCEAWA Trigger: TGCCCACGCTTCACAGAACTCAATGCGGAGCCTTCTCAGGAGTCACTTGACGTCAAGGCTGACTTTTAAATTTGCCAAAAAGGCATTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS TCA 90 bp | GCTGTAGCTTATCTCCTTCAATCCCAAATAGTTCTCATAGTTGGCTaGGAGAGGAGAGACCAGCCGCCTGTAATACCATCTATGATGCCT | + |
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Preference number: 5 (lower is better) Translates to: AVAYLLQSQIVLIVG*ERRDQPPVIPSMMP Trigger: AGGCATCATAGATGGTATTACAGGCGGCTGGTCTCTCCTCTCTCAGCCAACTATGAGAACTATTTGGGATTGAAGGAGATAAGCTACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664393.1 |
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| CDS CCA 90 bp | ACTTGCTGTAGCTTATCTCCTTCAATCCCAAATAGTTCTCATAGTTaGCTGAGAGAGGAGAGACCAGCCGCCTGTAATACCATCTATGAT | + |
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Preference number: 5 (lower is better) Translates to: TCCSLSPSIPNSSHS*LREERPAACNTIYD Trigger: ATCATAGATGGTATTACAGGCGGCTGGTCTCTCCTCTCTCAGCCAACTATGAGAACTATTTGGGATTGAAGGAGATAAGCTACAGCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664393.1 |
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| CDS TCA 90 bp | AACAATTATCTTGGGACACATCTCAAAACTATTAACTCCCCAGAATaGTCCACAGTGTTGATTCTCGGGTGGATGCTCCCAGTGTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: NNYLGTHLKTINSPE*STVLILGWMLPVFP Trigger: AGGAAACACTGGGAGCATCCACCCGAGAATCAACACTGTGGATCATTCTGGGGAGTTAATAGTTTTGAGATGTGTCCCAAGATAATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000432452.2 ENST00000655417.1 ENST00000657212.1 |
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| CDS CCA 90 bp | CAGAGTAATAGAATTCTATCATTGGAAGTGGAAGAATTTTCCACCTaGGGATTTCACCTGAATGGCACCTTTGGCCATTACCTGGCTCTT | + |
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Preference number: 5 (lower is better) Translates to: QSNRILSLEVEEFST*GFHLNGTFGHYLAL Trigger: AAGAGCCAGGTAATGGCCAAAGGTGCCATTCAGGTGAAATCCCCAGGTGGAAAATTCTTCCACTTCCAATGATAGAATTCTATTACTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS GCA 90 bp | CTTGCTCAAAGAAAGAAGGTCGTGCATTCAGGACAAGTAACGACTTaGTGTAGCTTATCTCCTTCAATCCCAAATAGTTCTCATAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LAQRKKVVHSGQVTT*CSLSPSIPNSSHSW Trigger: CCAACTATGAGAACTATTTGGGATTGAAGGAGATAAGCTACAGCAAGTCGTTACTTGTCCTGAATGCACGACCTTCTTTCTTTGAGCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664393.1 |
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| CDS TCA 90 bp | TCATCTATGTATCGAATTAAGTTTAGAAATGCAATTTGTGGGTTTTaGATTCCAGCAGCCAGTAGCAGCTCTCTAAAGAGGGAAAGTGAT | + |
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Preference number: 5 (lower is better) Translates to: SSMYRIKFRNAICGF*IPAASSSSLKRESD Trigger: ATCACTTTCCCTCTTTAGAGAGCTGCTACTGGCTGCTGGAATTCAAAACCCACAAATTGCATTTCTAAACTTAATTCGATACATAGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS CCA 90 bp | CGGTTGTTAGCAGCAGTTAAATCCATATGGTTGTTCTTGGCAAAATaGATCTTGTCCTCTATTTGTAAAGTCTTGTTTCACCAAACTATA | + |
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Preference number: 5 (lower is better) Translates to: RLLAAVKSIWLFLAK*ILSSICKVLFHQTI Trigger: TATAGTTTGGTGAAACAAGACTTTACAAATAGAGGACAAGATCCATTTTGCCAAGAACAACCATATGGATTTAACTGCTGCTAACAACCG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS GCA 72 bp | GTCAGAGAGGAAAGAATGTGGAGGATGGACCAGGCCTaGTGGGGCCCGCGCTCTGTAACAAGCGCCCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VREERMWRMDQA*WGPRSVTSAPW Trigger: CCAAGGGGCGCTTGTTACAGAGCGCGGGCCCCAGCAGGCCTGGTCCATCCTCCACATTCTTTCCTCTCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS CCA 72 bp | AGAGAGGAAAGAATGTGGAGGATGGACCAGGCCTGCTaGGGCCCGCGCTCTGTAACAAGCGCCCCTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: REERMWRMDQAC*GPRSVTSAPWG Trigger: TCCCCAAGGGGCGCTTGTTACAGAGCGCGGGCCCCAGCAGGCCTGGTCCATCCTCCACATTCTTTCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS CCA 72 bp | TGGTGCCTATCTTCCCCACCAGCAAACTCGGCGGCCTaGACCTCCAAATGTATCCTGACTCCGAGCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: WCLSSPPANSAA*TSKCILTPSWV Trigger: CACCCAGCTCGGAGTCAGGATACATTTGGAGGTCCAGGCCGCCGAGTTTGCTGGTGGGGAAGATAGGCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000656136.1 ENST00000664393.1 |
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| CDS TCA 72 bp | AGAGGTCAAAGTGAGCCGAGATCGCGCCAGCCTGGATaGCAGAGCAAGACCAATCTCTGCTGCACATCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RGQSEPRSRQPG*QSKTNLCCTSA Trigger: GGCAGATGTGCAGCAGAGATTGGTCTTGCTCTGTCATCCAGGCTGGCGCGATCTCGGCTCACTTTGACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657212.1 |
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| CDS TCA 72 bp | AGAGGTCAAAGTGAGCCGAGATCGCGCCAGCCTGGATaGCAGAGCAAGACCCTCTGGACAATGTACGGATTG | + |
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Preference number: 6 (lower is better) Translates to: RGQSEPRSRQPG*QSKTLWTMYGL Trigger: CAATCCGTACATTGTCCAGAGGGTCTTGCTCTGTCATCCAGGCTGGCGCGATCTCGGCTCACTTTGACCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648503.1 ENST00000655417.1 |
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| CDS GCA 72 bp | GAGCCACAACCATCTCCATTCTGGACGGCATCCATGTaGTCCGAAAGCTCTCCTGCTTCCTCTCAGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: EPQPSPFWTASM*SESSPASSQTS Trigger: GGAAGTCTGAGAGGAAGCAGGAGAGCTTTCGGAGCACATGGATGCCGTCCAGAATGGAGATGGTTGTGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000656136.1 ENST00000664393.1 |
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| CDS GCA 72 bp | TGGATGACAGAGCAAGACCAATCTCTGCTGCACATCTaGCCATGGAACAATGGCACTCCGAGCTCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: WMTEQDQSLLHI*PWNNGTPSSCS Trigger: GGAGCAGGAGCTCGGAGTGCCATTGTTCCATGGGCAGATGTGCAGCAGAGATTGGTCTTGCTCTGTCATCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657212.1 |
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| CDS CCA 72 bp | ACAGAGCAAGACCAATCTCTGCTGCACATCTGCCCATaGAACAATGGCACTCCGAGCTCCTGCTCCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: TEQDQSLLHICP*NNGTPSSCSRS Trigger: GGATCTGGAGCAGGAGCTCGGAGTGCCATTGTTCCATGGGCAGATGTGCAGCAGAGATTGGTCTTGCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657212.1 |
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| CDS GCA 72 bp | ATTCTGGACGGCATCCATGTGCTCCGAAAGCTCTCCTaGTTCCTCTCAGACTTCCCAACCATCTCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: ILDGIHVLRKLS*FLSDFPTISSP Trigger: TGGGGAAGAGATGGTTGGGAAGTCTGAGAGGAAGCAGGAGAGCTTTCGGAGCACATGGATGCCGTCCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000656136.1 ENST00000664393.1 |
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| CDS GCA 72 bp | CCCGTGGGATCCAACGGCATGAACCTCATCACCTTATaGCTACTGAAGGCCCTGCTTGTCTTCCTAATGCTC | + |
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Preference number: 6 (lower is better) Translates to: PVGSNGMNLITL*LLKALLVFLML Trigger: GAGCATTAGGAAGACAAGCAGGGCCTTCAGTAGGCATAAGGTGATGAGGTTCATGCCGTTGGATCCCACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656136.1 |
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| CDS CCA 72 bp | AGACCAATCTCTGCTGCACATCTGCCCATGGAACAATaGCACTCCGAGCTCCTGCTCCAGATCCTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RPISAAHLPMEQ*HSELLLQILIF Trigger: GAAGATGAGGATCTGGAGCAGGAGCTCGGAGTGCCATTGTTCCATGGGCAGATGTGCAGCAGAGATTGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657212.1 |
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| CDS GCA 72 bp | CCCGTGGGATCCAACGGCATGAACCTCATCACCTTATaGCTACTGAAGGCCCTGCTTGTCTTCCTAATGCTA | + |
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Preference number: 6 (lower is better) Translates to: PVGSNGMNLITL*LLKALLVFLML Trigger: TAGCATTAGGAAGACAAGCAGGGCCTTCAGTAGGCATAAGGTGATGAGGTTCATGCCGTTGGATCCCACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000664393.1 |
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| CDS CCA 72 bp | ATGCTAATCTCTGCTGCACATCTGCCCATGGAACAATaGCACTCCGAGCTCCTGCTCCAGATCCTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: MLISAAHLPMEQ*HSELLLQILIF Trigger: GAAGATGAGGATCTGGAGCAGGAGCTCGGAGTGCCATTGTTCCATGGGCAGATGTGCAGCAGAGATTAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000664393.1 |
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| CDS CCA 72 bp | ACAGAGCAAGACCCTCTGGACAATGTACGGATTGGCTaGGGGGCAGAAGAAATTGCCCTGGATGTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TEQDPLDNVRIG*GAEEIALDVLF Trigger: AAAGAGGACATCCAGGGCAATTTCTTCTGCCCCCCAGCCAATCCGTACATTGTCCAGAGGGTCTTGCTCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000648503.1 ENST00000655417.1 |
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| CDS CCA 72 bp | CTCCTGAGAAGGCTCCGCATTGAGTTCTGTGAAGCGTaGGCAGATCGGACTTTCACTCTCAAAACTCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: LLRRLRIEFCEA*ADRTFTLKTLS Trigger: CGACAGAGTTTTGAGAGTGAAAGTCCGATCTGCCCACGCTTCACAGAACTCAATGCGGAGCCTTCTCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS CCA 72 bp | ATTTCTTTTTCTTCCGAGCCACAACCATCTCCATTCTaGACGGCATCCATGTGCTCCGAAAGCTCTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ISFSSEPQPSPF*TASMCSESSPA Trigger: AGCAGGAGAGCTTTCGGAGCACATGGATGCCGTCCAGAATGGAGATGGTTGTGGCTCGGAAGAAAAAGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000648503.1 ENST00000655417.1 ENST00000656136.1 ENST00000664393.1 |
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| CDS GCA 72 bp | CCTGCTTGTCTTCCTAATGCTCCAGGTTTGTCCTCTTaGTCAAAGAAAGAAGGTCGTGCATTCAGGACAAGT | + |
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Preference number: 6 (lower is better) Translates to: PACLPNAPGLSS*SKKEGRAFRTS Trigger: ACTTGTCCTGAATGCACGACCTTCTTTCTTTGAGCAAGAGGACAAACCTGGAGCATTAGGAAGACAAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656136.1 |
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| CDS CCA 72 bp | AGCTTATCTCCTTCAATCCCAAATAGTTCTCATAGTTaGCTGAGAGAGGAGAGACCAGCCGCCTGTAATACC | + |
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Preference number: 6 (lower is better) Translates to: SLSPSIPNSSHS*LREERPAACNT Trigger: GGTATTACAGGCGGCTGGTCTCTCCTCTCTCAGCCAACTATGAGAACTATTTGGGATTGAAGGAGATAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664393.1 |
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| CDS TCA 72 bp | TCAAAACTATTAACTCCCCAGAATGATCCACAGTGTTaGTTCTCGGGTGGATGCTCCCAGTGTTTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SKLLTPQNDPQC*FSGGCSQCFLL Trigger: AAGGAGGAAACACTGGGAGCATCCACCCGAGAATCAACACTGTGGATCATTCTGGGGAGTTAATAGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000432452.2 ENST00000655417.1 ENST00000657212.1 |
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| CDS TCA 72 bp | TATCTCCTTCAATCCCAAATAGTTCTCATAGTTGGCTaGGAGAGGAGAGACCAGCCGCCTGTAATACCATCT | + |
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Preference number: 6 (lower is better) Translates to: YLLQSQIVLIVG*ERRDQPPVIPS Trigger: AGATGGTATTACAGGCGGCTGGTCTCTCCTCTCTCAGCCAACTATGAGAACTATTTGGGATTGAAGGAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664393.1 |
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| CDS GCA 72 bp | AGAAAGAAGGTCGTGCATTCAGGACAAGTAACGACTTaGTGTAGCTTATCTCCTTCAATCCCAAATAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RKKVVHSGQVTT*CSLSPSIPNSS Trigger: AGAACTATTTGGGATTGAAGGAGATAAGCTACAGCAAGTCGTTACTTGTCCTGAATGCACGACCTTCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664393.1 |
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| CDS TCA 72 bp | TATCGAATTAAGTTTAGAAATGCAATTTGTGGGTTTTaGATTCCAGCAGCCAGTAGCAGCTCTCTAAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: YRIKFRNAICGF*IPAASSSSLKR Trigger: CCTCTTTAGAGAGCTGCTACTGGCTGCTGGAATTCAAAACCCACAAATTGCATTTCTAAACTTAATTCGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS CAA 90 bp | TTAGCAGCAGTTAAATCCATATGGTTGTTCTTGGCAAAATGGATCTaGTCCTCTATTTGTAAAGTCTTGTTTCACCAAACTATAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LAAVKSIWLFLAKWI*SSICKVLFHQTIGR Trigger: TCTGCCTATAGTTTGGTGAAACAAGACTTTACAAATAGAGGACAAGATCCATTTTGCCAAGAACAACCATATGGATTTAACTGCTGCTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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| CDS CAA 72 bp | GTTAAATCCATATGGTTGTTCTTGGCAAAATGGATCTaGTCCTCTATTTGTAAAGTCTTGTTTCACCAAACT | + |
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Preference number: 6 (lower is better) Translates to: VKSIWLFLAKWI*SSICKVLFHQT Trigger: AGTTTGGTGAAACAAGACTTTACAAATAGAGGACAAGATCCATTTTGCCAAGAACAACCATATGGATTTAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655417.1 ENST00000657212.1 |
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