RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02651 (Homo sapiens)

Ensembl gene IDs: ENSG00000235645

Ensembl transcript IDs: ENST00000434931.2

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CAACCAAGGAAACACCGGCGACGGGGCCTCCGTCTGATGTCTGTCTaGCTCCATGGGAACTTCTCCCGGAAGCCTGGTGGGGGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: QPRKHRRRGLRLMSV*LHGNFSRKPGGGWN
Trigger: ATTCCAGCCCCCACCAGGCTTCCGGGAGAAGTTCCCATGGAGGCAGACAGACATCAGACGGAGGCCCCGTCGCCGGTGTTTCCTTGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 90 bp GAAACACCGGCGACGGGGCCTCCGTCTGATGTCTGTCTGCCTCCATaGGAACTTCTCCCGGAAGCCTGGTGGGGGCTGGAATCAAATCTG +
Preference number: 5 (lower is better)
Translates to: ETPATGPPSDVCLPP*ELLPEAWWGLESNL
Trigger: CAGATTTGATTCCAGCCCCCACCAGGCTTCCGGGAGAAGTTCCCATGGAGGCAGACAGACATCAGACGGAGGCCCCGTCGCCGGTGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 90 bp GGAAGCCTGGTGGGGGCTGGAATCAAATCTGCTCACATCCCAGCCTaGTCATGCCTGCAGAGGTGGCTGGTCACCAGTTCTGCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: GSLVGAGIKSAHIPA*SCLQRWLVTSSAGC
Trigger: ACAGCCTGCAGAACTGGTGACCAGCCACCTCTGCAGGCATGAGCAGGCTGGGATGTGAGCAGATTTGATTCCAGCCCCCACCAGGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 90 bp CTGGTGGGGGCTGGAATCAAATCTGCTCACATCCCAGCCTGCTCATaGCTGCAGAGGTGGCTGGTCACCAGTTCTGCAGGCTGTACAGGA +
Preference number: 5 (lower is better)
Translates to: LVGAGIKSAHIPACS*LQRWLVTSSAGCTG
Trigger: TCCTGTACAGCCTGCAGAACTGGTGACCAGCCACCTCTGCAGGCATGAGCAGGCTGGGATGTGAGCAGATTTGATTCCAGCCCCCACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 90 bp TCTGATGTCTGTCTGCCTCCATGGGAACTTCTCCCGGAAGCCTGGTaGGGGCTGGAATCAAATCTGCTCACATCCCAGCCTGCTCATGCC +
Preference number: 5 (lower is better)
Translates to: SDVCLPPWELLPEAW*GLESNLLTSQPAHA
Trigger: GGCATGAGCAGGCTGGGATGTGAGCAGATTTGATTCCAGCCCCCACCAGGCTTCCGGGAGAAGTTCCCATGGAGGCAGACAGACATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 90 bp CCGTCTGATGTCTGTCTGCCTCCATGGGAACTTCTCCCGGAAGCCTaGTGGGGGCTGGAATCAAATCTGCTCACATCCCAGCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: PSDVCLPPWELLPEA*WGLESNLLTSQPAH
Trigger: ATGAGCAGGCTGGGATGTGAGCAGATTTGATTCCAGCCCCCACCAGGCTTCCGGGAGAAGTTCCCATGGAGGCAGACAGACATCAGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 90 bp TGGGGGCTGGAATCAAATCTGCTCACATCCCAGCCTGCTCATGCCTaGAGAGGTGGCTGGTCACCAGTTCTGCAGGCTGTACAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: WGLESNLLTSQPAHA*RGGWSPVLQAVQEV
Trigger: TACTTCCTGTACAGCCTGCAGAACTGGTGACCAGCCACCTCTGCAGGCATGAGCAGGCTGGGATGTGAGCAGATTTGATTCCAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 90 bp CATCCCAGCCTGCTCATGCCTGCAGAGGTGGCTGGTCACCAGTTCTaGAGGCTGTACAGGAAGTATCGTATCAGCATTTTCTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: HPSLLMPAEVAGHQF*RLYRKYRISIFSAS
Trigger: AGAAGCTGAGAAAATGCTGATACGATACTTCCTGTACAGCCTGCAGAACTGGTGACCAGCCACCTCTGCAGGCATGAGCAGGCTGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 90 bp ATTCTCTGCCTTCCTTCTCCTTGTTTCCAGCATTCCCCCAGCTCTTaGACTCAGGAGTTCCAGGAAACAATGCTCTTGAGTCAGTCCGCC +
Preference number: 5 (lower is better)
Translates to: ILCLPSPCFQHSPSS*TQEFQETMLLSQSA
Trigger: GGCGGACTGACTCAAGAGCATTGTTTCCTGGAACTCCTGAGTCCAAGAGCTGGGGGAATGCTGGAAACAAGGAGAAGGAAGGCAGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 90 bp CTGGGAGGCCTCAGGGAGCTTTTACTCACTCCTAGAGCTACACTGTaGTGCAATGAAATCAACACTGTGCTGTGGAATTGCGGGGACTGT +
Preference number: 5 (lower is better)
Translates to: LGGLRELLLTPRATL*CNEINTVLWNCGDC
Trigger: ACAGTCCCCGCAATTCCACAGCACAGTGTTGATTTCATTGCACCACAGTGTAGCTCTAGGAGTGAGTAAAAGCTCCCTGAGGCCTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 90 bp GGAGGCCTCAGGGAGCTTTTACTCACTCCTAGAGCTACACTGTGGTaGAATGAAATCAACACTGTGCTGTGGAATTGCGGGGACTGTTGT +
Preference number: 5 (lower is better)
Translates to: GGLRELLLTPRATLW*NEINTVLWNCGDCC
Trigger: ACAACAGTCCCCGCAATTCCACAGCACAGTGTTGATTTCATTGCACCACAGTGTAGCTCTAGGAGTGAGTAAAAGCTCCCTGAGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 90 bp ACTCCTAGAGCTACACTGTGGTGCAATGAAATCAACACTGTGCTGTaGAATTGCGGGGACTGTTGTGACATCAGTGATGGCTGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: TPRATLWCNEINTVL*NCGDCCDISDGCAP
Trigger: AGGAGCACAGCCATCACTGATGTCACAACAGTCCCCGCAATTCCACAGCACAGTGTTGATTTCATTGCACCACAGTGTAGCTCTAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 90 bp TACTCACTCCTAGAGCTACACTGTGGTGCAATGAAATCAACACTGTaGTGTGGAATTGCGGGGACTGTTGTGACATCAGTGATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: YSLLELHCGAMKSTL*CGIAGTVVTSVMAV
Trigger: CACAGCCATCACTGATGTCACAACAGTCCCCGCAATTCCACAGCACAGTGTTGATTTCATTGCACCACAGTGTAGCTCTAGGAGTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS TCA 90 bp GGGATGGGGCGAGACAGAGGTGCGATTGGTTCCTTATCCCTCTTATaGCACCTTCCAATATTCTTGCATCTATTTATTCCTTGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: GMGRDRGAIGSLSLL*HLPIFLHLFIPCCL
Trigger: GAGGCAGCAAGGAATAAATAGATGCAAGAATATTGGAAGGTGTCATAAGAGGGATAAGGAACCAATCGCACCTCTGTCTCGCCCCATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 90 bp TATTCTTGCATCTATTTATTCCTTGCTGCCTCCACAAGCATTCTCTaGCTTCCTTCTCCTTGTTTCCAGCATTCCCCCAGCTCTTGGACT +
Preference number: 5 (lower is better)
Translates to: YSCIYLFLAASTSIL*LPSPCFQHSPSSWT
Trigger: AGTCCAAGAGCTGGGGGAATGCTGGAAACAAGGAGAAGGAAGGCAGAGAATGCTTGTGGAGGCAGCAAGGAATAAATAGATGCAAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 72 bp GCGACGGGGCCTCCGTCTGATGTCTGTCTGCCTCCATaGGAACTTCTCCCGGAAGCCTGGTGGGGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: ATGPPSDVCLPP*ELLPEAWWGLE
Trigger: TTCCAGCCCCCACCAGGCTTCCGGGAGAAGTTCCCATGGAGGCAGACAGACATCAGACGGAGGCCCCGTCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS TCA 72 bp AGCAACCAAGGAAACACCGGCGACGGGGCCTCCGTCTaGTGTCTGTCTGCCTCCATGGGAACTTCTCCCGGA +
Preference number: 6 (lower is better)
Translates to: SNQGNTGDGASV*CLSASMGTSPG
Trigger: TCCGGGAGAAGTTCCCATGGAGGCAGACAGACATCAGACGGAGGCCCCGTCGCCGGTGTTTCCTTGGTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 72 bp GTGGGGGCTGGAATCAAATCTGCTCACATCCCAGCCTaGTCATGCCTGCAGAGGTGGCTGGTCACCAGTTCT +
Preference number: 6 (lower is better)
Translates to: VGAGIKSAHIPA*SCLQRWLVTSS
Trigger: AGAACTGGTGACCAGCCACCTCTGCAGGCATGAGCAGGCTGGGATGTGAGCAGATTTGATTCCAGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 72 bp CTCCATGGGAACTTCTCCCGGAAGCCTGGTGGGGGCTaGAATCAAATCTGCTCACATCCCAGCCTGCTCATG +
Preference number: 6 (lower is better)
Translates to: LHGNFSRKPGGG*NQICSHPSLLM
Trigger: CATGAGCAGGCTGGGATGTGAGCAGATTTGATTCCAGCCCCCACCAGGCTTCCGGGAGAAGTTCCCATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 72 bp TGTCTGCCTCCATGGGAACTTCTCCCGGAAGCCTGGTaGGGGCTGGAATCAAATCTGCTCACATCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: CLPPWELLPEAW*GLESNLLTSQP
Trigger: AGGCTGGGATGTGAGCAGATTTGATTCCAGCCCCCACCAGGCTTCCGGGAGAAGTTCCCATGGAGGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 72 bp CTGCTCATGCCTGCAGAGGTGGCTGGTCACCAGTTCTaGAGGCTGTACAGGAAGTATCGTATCAGCATTTTC +
Preference number: 6 (lower is better)
Translates to: LLMPAEVAGHQF*RLYRKYRISIF
Trigger: GAAAATGCTGATACGATACTTCCTGTACAGCCTGCAGAACTGGTGACCAGCCACCTCTGCAGGCATGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CAA 72 bp AGCTCTTGGACTCAGGAGTTCCAGGAAACAATGCTCTaGAGTCAGTCCGCCCTGAGTAGCTTCCTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: SSWTQEFQETML*SQSALSSFLLR
Trigger: CCTTAGCAGGAAGCTACTCAGGGCGGACTGACTCAAGAGCATTGTTTCCTGGAACTCCTGAGTCCAAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CAA 90 bp CATTCTCTGCCTTCCTTCTCCTTGTTTCCAGCATTCCCCCAGCTCTaGGACTCAGGAGTTCCAGGAAACAATGCTCTTGAGTCAGTCCGC +
Preference number: 6 (lower is better)
Translates to: HSLPSFSLFPAFPQL*DSGVPGNNALESVR
Trigger: GCGGACTGACTCAAGAGCATTGTTTCCTGGAACTCCTGAGTCCAAGAGCTGGGGGAATGCTGGAAACAAGGAGAAGGAAGGCAGAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 72 bp CTTCCTTCTCCTTGTTTCCAGCATTCCCCCAGCTCTTaGACTCAGGAGTTCCAGGAAACAATGCTCTTGAGT +
Preference number: 6 (lower is better)
Translates to: LPSPCFQHSPSS*TQEFQETMLLS
Trigger: ACTCAAGAGCATTGTTTCCTGGAACTCCTGAGTCCAAGAGCTGGGGGAATGCTGGAAACAAGGAGAAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 72 bp CTAGAGCTACACTGTGGTGCAATGAAATCAACACTGTaGTGTGGAATTGCGGGGACTGTTGTGACATCAGTG +
Preference number: 6 (lower is better)
Translates to: LELHCGAMKSTL*CGIAGTVVTSV
Trigger: CACTGATGTCACAACAGTCCCCGCAATTCCACAGCACAGTGTTGATTTCATTGCACCACAGTGTAGCTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS GCA 72 bp AGGGAGCTTTTACTCACTCCTAGAGCTACACTGTGGTaGAATGAAATCAACACTGTGCTGTGGAATTGCGGG +
Preference number: 6 (lower is better)
Translates to: RELLLTPRATLW*NEINTVLWNCG
Trigger: CCCGCAATTCCACAGCACAGTGTTGATTTCATTGCACCACAGTGTAGCTCTAGGAGTGAGTAAAAGCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 72 bp GTACAGGAAGTATCGTATCAGCATTTTCTCAGCTTCTaGGAGGCCTCAGGGAGCTTTTACTCACTCCTAGAG +
Preference number: 6 (lower is better)
Translates to: VQEVSYQHFLSF*EASGSFYSLLE
Trigger: CTCTAGGAGTGAGTAAAAGCTCCCTGAGGCCTCCCAGAAGCTGAGAAAATGCTGATACGATACTTCCTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434931.2
CDS CCA 72 bp CTCAGGGAGCTTTTACTCACTCCTAGAGCTACACTGTaGTGCAATGAAATCAACACTGTGCTGTGGAATTGC +
Preference number: 6 (lower is better)
Translates to: LRELLLTPRATL*CNEINTVLWNC
Trigger: GCAATTCCACAGCACAGTGTTGATTTCATTGCACCACAGTGTAGCTCTAGGAGTGAGTAAAAGCTCCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434931.2