Pregenerated sensors for LINC02649 (Homo sapiens)
Ensembl gene IDs: ENSG00000215244Ensembl transcript IDs: ENST00000399868.2, ENST00000659311.1, ENST00000660179.1, ENST00000664595.1, ENST00000670319.1, ENST00000670683.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGAGCCGTACACTTCTCTCTCCCGGGAGGAGACCCAGGGCCAAGTaGCACTGCGGTAACTGGAAATCCCTTCTCCAAGGCCAGAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GSRTLLSPGRRPRAK*HCGNWKSLLQGQSP Trigger: AGGGCTCTGGCCTTGGAGAAGGGATTTCCAGTTACCGCAGTGTCACTTGGCCCTGGGTCTCCTCCCGGGAGAGAGAAGTGTACGGCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000399868.2 ENST00000659311.1 ENST00000670683.1 |
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| CDS GCA 90 bp | CTAATCTTAGACCTGGCTCAGTCCTACCCCGTGGGCAGCAGCTGTTaGAGGAACATGGACACAGGCTGGCACCAGCGTGTTTGGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LILDLAQSYPVGSSC*RNMDTGWHQRVWVL Trigger: CAGCACCCAAACACGCTGGTGCCAGCCTGTGTCCATGTTCCTGCAACAGCTGCTGCCCACGGGGTAGGACTGAGCCAGGTCTAAGATTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS GCA 90 bp | TTTAGCCAAGTGCGACGGAGAAGGACAGGCATGTGTGAAGAGGCCTaGCCAAATGTTACCCGGTGCGGAGGCCTTTGTTTAGCCCATTGG | + |
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Preference number: 5 (lower is better) Translates to: FSQVRRRRTGMCEEA*PNVTRCGGLCLAHW Trigger: CCAATGGGCTAAACAAAGGCCTCCGCACCGGGTAACATTTGGGCAGGCCTCTTCACACATGCCTGTCCTTCTCCGTCGCACTTGGCTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CCA 90 bp | TCACACTTCCTCGTCGGGGCAACGGAGCAGGGAGGAGAGTCACGGTaGAGCTCCTTACTGGTAACTCCATATCTTAGCAGAGGTGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: SHFLVGATEQGGESR*SSLLVTPYLSRGVG Trigger: TCCAACACCTCTGCTAAGATATGGAGTTACCAGTAAGGAGCTCCACCGTGACTCTCCTCCCTGCTCCGTTGCCCCGACGAGGAAGTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659311.1 |
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| CDS GCA 90 bp | AGAAGGACAGGCATGTGTGAAGAGGCCTGCCCAAATGTTACCCGGTaGGGAGGCCTTTGTTTAGCCCATTGGCAAGAGAAACACCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: RRTGMCEEACPNVTR*GGLCLAHWQEKHQH Trigger: GTGCTGGTGTTTCTCTTGCCAATGGGCTAAACAAAGGCCTCCGCACCGGGTAACATTTGGGCAGGCCTCTTCACACATGCCTGTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS GCA 90 bp | CCATTTGCAGAAGGCCACCTTCTTGCCGTCCAGCATCTGACGCCGTaGCTGACACATGAGAGGGGCTTCATATGTGAAGTTCGCGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: PFAEGHLLAVQHLTP*LTHERGFICEVRVE Trigger: TTCAACGCGAACTTCACATATGAAGCCCCTCTCATGTGTCAGGCACGGCGTCAGATGCTGGACGGCAAGAAGGTGGCCTTCTGCAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000664595.1 |
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| CDS GCA 90 bp | CATGACAGCAACAAGCCAGGCCACATCTGGACCGTGTGCAAAGTTTaGAAGTGCCGTGGAAGTGGCAGTTGCCAATTTCTGACAGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: HDSNKPGHIWTVCKV*KCRGSGSCQFLTGA Trigger: TGCCCCTGTCAGAAATTGGCAACTGCCACTTCCACGGCACTTGCAAACTTTGCACACGGTCCAGATGTGGCCTGGCTTGTTGCTGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS GCA 90 bp | CACTTACTTCTTACAGTACTGAGGCTGGGAAGCCCAAGATCGAGGTaGTGGCAGATCCCACACCTGGTGAGGACTCATCCCCATTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: HLLLTVLRLGSPRSR*WQIPHLVRTHPHLQ Trigger: CTGCAAATGGGGATGAGTCCTCACCAGGTGTGGGATCTGCCAGCACCTCGATCTTGGGCTTCCCAGCCTCAGTACTGTAAGAAGTAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670319.1 |
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| CDS CCA 90 bp | TCACACTTCCTCGTCGGGGCAACGGAGCAGGGAGGAGAGTCACGGTaGAGCTCCTTACTGGTAACTCCATATCTCTGTGTTCTTTACCGA | + |
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Preference number: 5 (lower is better) Translates to: SHFLVGATEQGGESR*SSLLVTPYLCVLYR Trigger: TCGGTAAAGAACACAGAGATATGGAGTTACCAGTAAGGAGCTCCACCGTGACTCTCCTCCCTGCTCCGTTGCCCCGACGAGGAAGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670683.1 |
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| CDS TCA 90 bp | CTGGGCACGTGTTCACCTTCTTGCCAAAGTAAAGCTGGCTGTGGCTaGGAGCTCTTTCAAAACTGCCAGGAACCTTGGGAGCCGTACACT | + |
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Preference number: 5 (lower is better) Translates to: LGTCSPSCQSKAGCG*ELFQNCQEPWEPYT Trigger: AGTGTACGGCTCCCAAGGTTCCTGGCAGTTTTGAAAGAGCTCTCAGCCACAGCCAGCTTTACTTTGGCAAGAAGGTGAACACGTGCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659311.1 |
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| CDS CCA 90 bp | TCACACTTCCTCGTCGGGGCAACGGAGCAGGGAGGAGAGTCACGGTaGAGCTCCTTACTGGTAACTCCATATCTGAGACTGGGTAATTTA | + |
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Preference number: 5 (lower is better) Translates to: SHFLVGATEQGGESR*SSLLVTPYLRLGNL Trigger: TAAATTACCCAGTCTCAGATATGGAGTTACCAGTAAGGAGCTCCACCGTGACTCTCCTCCCTGCTCCGTTGCCCCGACGAGGAAGTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399868.2 |
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| CDS CCA 90 bp | ATGGGGGTGATTGCGATATCCCTTCCATCCAGTGCTCAGGTGGAATaGGCTTCCTCGGGACATAGGATACCTGCTCACCATGTTTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: MGVIAISLPSSAQVE*ASSGHRIPAHHVWS Trigger: TGACCAAACATGGTGAGCAGGTATCCTATGTCCCGAGGAAGCCCATTCCACCTGAGCACTGGATGGAAGGGATATCGCAATCACCCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CCA 90 bp | CAAGCCAGGCCACATCTGGACCGTGTGCAAAGTTTGCAAGTGCCGTaGAAGTGGCAGTTGCCAATTTCTGACAGGGGCATGAGTTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: QARPHLDRVQSLQVP*KWQLPISDRGMSFH Trigger: ATGGAAACTCATGCCCCTGTCAGAAATTGGCAACTGCCACTTCCACGGCACTTGCAAACTTTGCACACGGTCCAGATGTGGCCTGGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CCA 90 bp | GACTCATCCCCATTTGCAGAAGGCCACCTTCTTGCCGTCCTCACATaGCGGAGAGGAGACAGAAAGAGATCATCTCTCCTGTGTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: DSSPFAEGHLLAVLT*RRGDRKRSSLLCLF Trigger: GAAGAGACACAGGAGAGATGATCTCTTTCTGTCTCCTCTCCGCCATGTGAGGACGGCAAGAAGGTGGCCTTCTGCAAATGGGGATGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670319.1 |
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| CDS CCA 90 bp | TTACTTCTTACAGTACTGAGGCTGGGAAGCCCAAGATCGAGGTGCTaGCAGATCCCACACCTGGTGAGGACTCATCCCCATTTGCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLLTVLRLGSPRSRC*QIPHLVRTHPHLQK Trigger: CTTCTGCAAATGGGGATGAGTCCTCACCAGGTGTGGGATCTGCCAGCACCTCGATCTTGGGCTTCCCAGCCTCAGTACTGTAAGAAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670319.1 |
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| CDS TCA 90 bp | AAGAAAGGGGATGGCCTCACTTGCCAAAGTAAAGCTGGCTGTGGCTaGGAGCTCTTTCAAAACTGCCAGGAACCTTGGGAGCCGTACACT | + |
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Preference number: 5 (lower is better) Translates to: KKGDGLTCQSKAGCG*ELFQNCQEPWEPYT Trigger: AGTGTACGGCTCCCAAGGTTCCTGGCAGTTTTGAAAGAGCTCTCAGCCACAGCCAGCTTTACTTTGGCAAGTGAGGCCATCCCCTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS TCA 90 bp | GAGCTCCCGAGTTTTGATTCCGTTGTGAGTCAATGTGCAGGAACCTaGGGAGCTGGGACACTGCTAATCTTAGACCTGGCTCAGTCCTAC | + |
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Preference number: 5 (lower is better) Translates to: ELPSFDSVVSQCAGT*GAGTLLILDLAQSY Trigger: GTAGGACTGAGCCAGGTCTAAGATTAGCAGTGTCCCAGCTCCTCAGGTTCCTGCACATTGACTCACAACGGAATCAAAACTCGGGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CCA 90 bp | GCCTGCCCAAATGTTACCCGGTGCGGAGGCCTTTGTTTAGCCCATTaGCAAGAGAAACACCAGCACCACATTCTTGGTGAAAAGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: ACPNVTRCGGLCLAH*QEKHQHHILGEKPL Trigger: AAGAGGCTTTTCACCAAGAATGTGGTGCTGGTGTTTCTCTTGCCAATGGGCTAAACAAAGGCCTCCGCACCGGGTAACATTTGGGCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS TCA 90 bp | TGCAAGTGCCGTGGAAGTGGCAGTTGCCAATTTCTGACAGGGGCATaGGTTTCCATTGAGTGTCCAATGCTCCTAGACCTGTCCATCATG | + |
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Preference number: 5 (lower is better) Translates to: CKCRGSGSCQFLTGA*VSIECPMLLDLSIM Trigger: CATGATGGACAGGTCTAGGAGCATTGGACACTCAATGGAAACTCATGCCCCTGTCAGAAATTGGCAACTGCCACTTCCACGGCACTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CCA 90 bp | ATATCACTGAAAGGGAATGTTGGGCTTCAAGAGCTTCTCGCATTCTaGAAGCACACCAGTGGTCAGCTTTCTTCTCCACCGGGTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: ISLKGNVGLQELLAF*KHTSGQLSSPPGGR Trigger: TCTACCACCCGGTGGAGAAGAAAGCTGACCACTGGTGTGCTTCCAGAATGCGAGAAGCTCTTGAAGCCCAACATTCCCTTTCAGTGATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CCA 90 bp | GTGGAATGGGCTTCCTCGGGACATAGGATACCTGCTCACCATGTTTaGTCATCAGTAGCTGGATATGAATCCCATCTTTGCCAGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: VEWASSGHRIPAHHV*SSVAGYESHLCQRL Trigger: CAGTCTCTGGCAAAGATGGGATTCATATCCAGCTACTGATGACCAAACATGGTGAGCAGGTATCCTATGTCCCGAGGAAGCCCATTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS GCA 90 bp | GGGGCTTCATATGTGAAGTTCGCGTTGAACAATAGTTCTCAACCGTaGTGGCGTACTGAAGTTACCCATTTGATGCCCACTGTGGTCGTT | + |
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Preference number: 5 (lower is better) Translates to: GASYVKFALNNSSQP*WRTEVTHLMPTVVV Trigger: AACGACCACAGTGGGCATCAAATGGGTAACTTCAGTACGCCAGCACGGTTGAGAACTATTGTTCAACGCGAACTTCACATATGAAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CCA 90 bp | GCTTCATATGTGAAGTTCGCGTTGAACAATAGTTCTCAACCGTGCTaGCGTACTGAAGTTACCCATTTGATGCCCACTGTGGTCGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: ASYVKFALNNSSQPC*RTEVTHLMPTVVVP Trigger: GGGAACGACCACAGTGGGCATCAAATGGGTAACTTCAGTACGCCAGCACGGTTGAGAACTATTGTTCAACGCGAACTTCACATATGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CCA 90 bp | TCCCAATACCATCACACTGAGGGTGTGACTTCAACATACAAATTTTaGGGGACACAAACATTCAGTCCCTACCAGCATCTGACGCCGTGC | + |
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Preference number: 5 (lower is better) Translates to: SQYHHTEGVTSTYKF*GTQTFSPYQHLTPC Trigger: GCACGGCGTCAGATGCTGGTAGGGACTGAATGTTTGTGTCCCCCAAAATTTGTATGTTGAAGTCACACCCTCAGTGTGATGGTATTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670319.1 |
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| CDS GCA 90 bp | CATCTCTTTATACTTTTCACACATAGGTTGTTGGCTTTAGCCAAGTaGGACGGAGAAGGACAGGCATGTGTGAAGAGGCCTGCCCAAATG | + |
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Preference number: 5 (lower is better) Translates to: HLFILFTHRLLALAK*DGEGQACVKRPAQM Trigger: CATTTGGGCAGGCCTCTTCACACATGCCTGTCCTTCTCCGTCGCACTTGGCTAAAGCCAACAACCTATGTGTGAAAAGTATAAAGAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS GCA 90 bp | CACAATATGAGCAAGATCTGCAGAAATCCCCTAAGTAATTACTATTaGTACCATGACAGCAACAAGCCAGGCCACATCTGGACCGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: HNMSKICRNPLSNYY*YHDSNKPGHIWTVC Trigger: GCACACGGTCCAGATGTGGCCTGGCTTGTTGCTGTCATGGTAGCAATAGTAATTACTTAGGGGATTTCTGCAGATCTTGCTCATATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS TCA 90 bp | CTCTCTTTCATCTTTGATTCTGTAAGCCACTGGGATGTGTTCCCATaGAGTACTGGGACATTTCTTCACCTTCATATTCTTAGCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: LSFIFDSVSHWDVFP*STGTFLHLHILSIC Trigger: ACAGATGCTAAGAATATGAAGGTGAAGAAATGTCCCAGTACTTCATGGGAACACATCCCAGTGGCTTACAGAATCAAAGATGAAAGAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670319.1 |
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| CDS CCA 90 bp | TCATCAGTAGCTGGATATGAATCCCATCTTTGCCAGAGACTGGCTTaGGCAAATTATTTAACCACACCCTTTTTCAGTTTCAGCATCTAT | + |
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Preference number: 5 (lower is better) Translates to: SSVAGYESHLCQRLA*ANYLTTPFFSFSIY Trigger: ATAGATGCTGAAACTGAAAAAGGGTGTGGTTAAATAATTTGCCCAAGCCAGTCTCTGGCAAAGATGGGATTCATATCCAGCTACTGATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS GCA 90 bp | GCAGATGCATTCACTTATAATTTTTACATATGTACATGCAAGGCTTaGAACTATGAGTGCCCTCCAACAATGGAACAGATGCAAAATAGA | + |
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Preference number: 5 (lower is better) Translates to: ADAFTYNFYICTCKA*NYECPPTMEQMQNR Trigger: TCTATTTTGCATCTGTTCCATTGTTGGAGGGCACTCATAGTTGCAAGCCTTGCATGTACATATGTAAAAATTATAAGTGAATGCATCTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS GCA 90 bp | GAAATCATGTTATCAGATGACGCCATAGTTGTCTCGCAATTGCTTTaGGGAAGGATTTTTCATGGGAATTTTTCCATCTCTTTATACTTT | + |
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Preference number: 5 (lower is better) Translates to: EIMLSDDAIVVSQLL*GRIFHGNFSISLYF Trigger: AAAGTATAAAGAGATGGAAAAATTCCCATGAAAAATCCTTCCGCAAAGCAATTGCGAGACAACTATGGCGTCATCTGATAACATGATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CAA 90 bp | GCTAATCTTAGACCTGGCTCAGTCCTACCCCGTGGGCAGCAGCTGTaGCAGGAACATGGACACAGGCTGGCACCAGCGTGTTTGGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ANLRPGSVLPRGQQL*QEHGHRLAPACLGA Trigger: AGCACCCAAACACGCTGGTGCCAGCCTGTGTCCATGTTCCTGCAACAGCTGCTGCCCACGGGGTAGGACTGAGCCAGGTCTAAGATTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS TCA 72 bp | GCCCAAGATCGAGGTGCTGGCAGATCCCACACCTGGTaGGGACTCATCCCCATTTGCAGAAGGCCACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AQDRGAGRSHTW*GLIPICRRPPS Trigger: AGAAGGTGGCCTTCTGCAAATGGGGATGAGTCCTCACCAGGTGTGGGATCTGCCAGCACCTCGATCTTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000399868.2 ENST00000664595.1 ENST00000670319.1 |
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| CDS GCA 72 bp | CTTACAGTACTGAGGCTGGGAAGCCCAAGATCGAGGTaGTGGCAGATCCCACACCTGGTGAGGACTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: LTVLRLGSPRSR*WQIPHLVRTHP Trigger: GGGATGAGTCCTCACCAGGTGTGGGATCTGCCAGCACCTCGATCTTGGGCTTCCCAGCCTCAGTACTGTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000399868.2 ENST00000664595.1 ENST00000670319.1 |
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| CDS CCA 72 bp | CTCGTCGGGGCAACGGAGCAGGGAGGAGAGTCACGGTaGAGCTCCTTACTGGTAACTCCATATCTGAGACTG | + |
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Preference number: 6 (lower is better) Translates to: LVGATEQGGESR*SSLLVTPYLRL Trigger: CAGTCTCAGATATGGAGTTACCAGTAAGGAGCTCCACCGTGACTCTCCTCCCTGCTCCGTTGCCCCGACGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399868.2 |
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| CDS CCA 72 bp | GTGGGCAGCAGCTGTTGCAGGAACATGGACACAGGCTaGCACCAGCGTGTTTGGGTGCTGATTTGGGGCATA | + |
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Preference number: 6 (lower is better) Translates to: VGSSCCRNMDTG*HQRVWVLIWGI Trigger: TATGCCCCAAATCAGCACCCAAACACGCTGGTGCCAGCCTGTGTCCATGTTCCTGCAACAGCTGCTGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS GCA 72 bp | GTGCGACGGAGAAGGACAGGCATGTGTGAAGAGGCCTaGCCAAATGTTACCCGGTGCGGAGGCCTTTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: VRRRRTGMCEEA*PNVTRCGGLCL Trigger: TAAACAAAGGCCTCCGCACCGGGTAACATTTGGGCAGGCCTCTTCACACATGCCTGTCCTTCTCCGTCGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CCA 72 bp | CTCGTCGGGGCAACGGAGCAGGGAGGAGAGTCACGGTaGAGCTCCTTACTGGTAACTCCATATCTTAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LVGATEQGGESR*SSLLVTPYLSR Trigger: TCTGCTAAGATATGGAGTTACCAGTAAGGAGCTCCACCGTGACTCTCCTCCCTGCTCCGTTGCCCCGACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659311.1 |
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| CDS CCA 72 bp | CTCGTCGGGGCAACGGAGCAGGGAGGAGAGTCACGGTaGAGCTCCTTACTGGTAACTCCATATCTCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LVGATEQGGESR*SSLLVTPYLCV Trigger: AACACAGAGATATGGAGTTACCAGTAAGGAGCTCCACCGTGACTCTCCTCCCTGCTCCGTTGCCCCGACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670683.1 |
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| CDS CAA 72 bp | CTGTGGCTGAGAGCTCTTTCAAAACTGCCAGGAACCTaGGGAGCCGTACACTTCTCTCTCCCGGGAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LWLRALSKLPGT*GAVHFSLPGGD Trigger: GTCTCCTCCCGGGAGAGAGAAGTGTACGGCTCCCAAGGTTCCTGGCAGTTTTGAAAGAGCTCTCAGCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000399868.2 ENST00000659311.1 ENST00000670683.1 |
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| CDS GCA 72 bp | GAAGGCCACCTTCTTGCCGTCCAGCATCTGACGCCGTaGCTGACACATGAGAGGGGCTTCATATGTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: EGHLLAVQHLTP*LTHERGFICEV Trigger: AACTTCACATATGAAGCCCCTCTCATGTGTCAGGCACGGCGTCAGATGCTGGACGGCAAGAAGGTGGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000664595.1 |
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| CDS GCA 72 bp | CCAGGCCACATCTGGACCGTGTGCAAAGTTTGCAAGTaGCGTGGAAGTGGCAGTTGCCAATTTCTGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: PGHIWTVCKVCK*RGSGSCQFLTG Trigger: CCCTGTCAGAAATTGGCAACTGCCACTTCCACGGCACTTGCAAACTTTGCACACGGTCCAGATGTGGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CAA 72 bp | AGAGGCCTGCCCAAATGTTACCCGGTGCGGAGGCCTTaGTTTAGCCCATTGGCAAGAGAAACACCAGCACCA | + |
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Preference number: 6 (lower is better) Translates to: RGLPKCYPVRRP*FSPLARETPAP Trigger: TGGTGCTGGTGTTTCTCTTGCCAATGGGCTAAACAAAGGCCTCCGCACCGGGTAACATTTGGGCAGGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CAA 72 bp | GTGAGGACTCATCCCCATTTGCAGAAGGCCACCTTCTaGCCGTCCTCACATGGCGGAGAGGAGACAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: VRTHPHLQKATF*PSSHGGEETER Trigger: TCTTTCTGTCTCCTCTCCGCCATGTGAGGACGGCAAGAAGGTGGCCTTCTGCAAATGGGGATGAGTCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670319.1 |
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| CDS CCA 72 bp | CCACATCTGGACCGTGTGCAAAGTTTGCAAGTGCCGTaGAAGTGGCAGTTGCCAATTTCTGACAGGGGCATG | + |
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Preference number: 6 (lower is better) Translates to: PHLDRVQSLQVP*KWQLPISDRGM Trigger: CATGCCCCTGTCAGAAATTGGCAACTGCCACTTCCACGGCACTTGCAAACTTTGCACACGGTCCAGATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS TCA 72 bp | GATGGCCTCACTTGCCAAAGTAAAGCTGGCTGTGGCTaGGAGCTCTTTCAAAACTGCCAGGAACCTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: DGLTCQSKAGCG*ELFQNCQEPWE Trigger: CTCCCAAGGTTCCTGGCAGTTTTGAAAGAGCTCTCAGCCACAGCCAGCTTTACTTTGGCAAGTGAGGCCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS GCA 72 bp | AGGCGCCTGACAAGGGTTTCAATAGTTGTTGCGCAGTaGTCAGGCCTGTTAATCCCAGCACTTTGGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: RRLTRVSIVVAQ*SGLLIPALWEA Trigger: AGCTTCCCAAAGTGCTGGGATTAACAGGCCTGAGCACTGCGCAACAACTATTGAAACCCTTGTCAGGCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399868.2 |
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| CDS GCA 72 bp | GTCCAACAGGCGCCTGACAAGGGTTTCAATAGTTGTTaGGCAGTGCTCAGGCCTGTTAATCCCAGCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: VQQAPDKGFNSC*AVLRPVNPSTL Trigger: CAAAGTGCTGGGATTAACAGGCCTGAGCACTGCGCAACAACTATTGAAACCCTTGTCAGGCGCCTGTTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399868.2 |
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| CDS CCA 72 bp | CTTCTCCACCGGGTGGTAGAGATGTCTTTAACTCTCTaGAGGTTGGCGAGGGAGGAATCCCTTACATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LLHRVVEMSLTL*RLAREESLTLS Trigger: GCTCAATGTAAGGGATTCCTCCCTCGCCAACCTCCAGAGAGTTAAAGACATCTCTACCACCCGGTGGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CCA 72 bp | ATTGCGATATCCCTTCCATCCAGTGCTCAGGTGGAATaGGCTTCCTCGGGACATAGGATACCTGCTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: IAISLPSSAQVE*ASSGHRIPAHH Trigger: ATGGTGAGCAGGTATCCTATGTCCCGAGGAAGCCCATTCCACCTGAGCACTGGATGGAAGGGATATCGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CCA 72 bp | CTGGACCGTGTGCAAAGTTTGCAAGTGCCGTGGAAGTaGCAGTTGCCAATTTCTGACAGGGGCATGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LDRVQSLQVPWK*QLPISDRGMSF Trigger: GAAACTCATGCCCCTGTCAGAAATTGGCAACTGCCACTTCCACGGCACTTGCAAACTTTGCACACGGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CAA 90 bp | CTGGACATTTTAAGCTCCTCTAACGACTCTAACATGCGGTCAAGGTaGAGAACCACTGACATAGAAAGAACACCTCGGCCGGGCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LDILSSSNDSNMRSR*RTTDIERTPRPGAV Trigger: CACCGCGCCCGGCCGAGGTGTTCTTTCTATGTCAGTGGTTCTCAACCTTGACCGCATGTTAGAGTCGTTAGAGGAGCTTAAAATGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS TCA 72 bp | AAGCTGAGGAGGGTGGATCTCTTGAGCCCAAAAGTTTaGGACCAACCTGCCAACATGGCAAAATCCCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: KLRRVDLLSPKV*DQPANMAKSRL Trigger: GAGACGGGATTTTGCCATGTTGGCAGGTTGGTCTCAAACTTTTGGGCTCAAGAGATCCACCCTCCTCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS TCA 72 bp | CGTGGAAGTGGCAGTTGCCAATTTCTGACAGGGGCATaGGTTTCCATTGAGTGTCCAATGCTCCTAGACCTG | + |
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Preference number: 6 (lower is better) Translates to: RGSGSCQFLTGA*VSIECPMLLDL Trigger: CAGGTCTAGGAGCATTGGACACTCAATGGAAACTCATGCCCCTGTCAGAAATTGGCAACTGCCACTTCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS GCA 72 bp | TTCCTTAGGCTGTACAGAAAGCGTGGTGCTGGCATCTaGTCAGCTTCTAGGGAGGCCTCAGGAAACTTACAA | + |
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Preference number: 6 (lower is better) Translates to: FLRLYRKRGAGI*SASREASGNLQ Trigger: TTGTAAGTTTCCTGAGGCCTCCCTAGAAGCTGAGCAGATGCCAGCACCACGCTTTCTGTACAGCCTAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000399868.2 |
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| CDS CCA 72 bp | AAAGGGAATGTTGGGCTTCAAGAGCTTCTCGCATTCTaGAAGCACACCAGTGGTCAGCTTTCTTCTCCACCG | + |
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Preference number: 6 (lower is better) Translates to: KGNVGLQELLAF*KHTSGQLSSPP Trigger: CGGTGGAGAAGAAAGCTGACCACTGGTGTGCTTCCAGAATGCGAGAAGCTCTTGAAGCCCAACATTCCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CCA 72 bp | TATTGCTACCATGACAGCAACAAGCCAGGCCACATCTaGACCGTGTGCAAAGTTTGCAAGTGCCGTGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: YCYHDSNKPGHI*TVCKVCKCRGS Trigger: ACTTCCACGGCACTTGCAAACTTTGCACACGGTCCAGATGTGGCCTGGCTTGTTGCTGTCATGGTAGCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CAA 90 bp | CAGCAGCTGTTGCAGGAACATGGACACAGGCTGGCACCAGCGTGTTaGGGTGCTGATTTGGGGCATATTTCTTTTCTAGTTGATTTGTCG | + |
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Preference number: 6 (lower is better) Translates to: QQLLQEHGHRLAPAC*GADLGHISFLVDLS Trigger: CGACAAATCAACTAGAAAAGAAATATGCCCCAAATCAGCACCCAAACACGCTGGTGCCAGCCTGTGTCCATGTTCCTGCAACAGCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS TCA 72 bp | TGTTCACCTTCTTGCCAAAGTAAAGCTGGCTGTGGCTaGGAGCTCTTTCAAAACTGCCAGGAACCTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: CSPSCQSKAGCG*ELFQNCQEPWE Trigger: CTCCCAAGGTTCCTGGCAGTTTTGAAAGAGCTCTCAGCCACAGCCAGCTTTACTTTGGCAAGAAGGTGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659311.1 |
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| CDS GCA 72 bp | ACACAAACATTCAGTCCCTACCAGCATCTGACGCCGTaGCTGACACATGAGAGGGGCTTCATATGTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: TQTFSPYQHLTP*LTHERGFICEV Trigger: AACTTCACATATGAAGCCCCTCTCATGTGTCAGGCACGGCGTCAGATGCTGGTAGGGACTGAATGTTTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670319.1 |
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| CDS CCA 72 bp | AATGTTACCCGGTGCGGAGGCCTTTGTTTAGCCCATTaGCAAGAGAAACACCAGCACCACATTCTTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: NVTRCGGLCLAH*QEKHQHHILGE Trigger: TTCACCAAGAATGTGGTGCTGGTGTTTCTCTTGCCAATGGGCTAAACAAAGGCCTCCGCACCGGGTAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CAA 72 bp | GGACACAGGCTGGCACCAGCGTGTTTGGGTGCTGATTaGGGGCATATTTCTTTTCTAGTTGATTTGTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: GHRLAPACLGAD*GHISFLVDLSW Trigger: CCACGACAAATCAACTAGAAAAGAAATATGCCCCAAATCAGCACCCAAACACGCTGGTGCCAGCCTGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS TCA 72 bp | AGTTTTGATTCCGTTGTGAGTCAATGTGCAGGAACCTaGGGAGCTGGGACACTGCTAATCTTAGACCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SFDSVVSQCAGT*GAGTLLILDLA Trigger: AGCCAGGTCTAAGATTAGCAGTGTCCCAGCTCCTCAGGTTCCTGCACATTGACTCACAACGGAATCAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS TCA 72 bp | ACCTGCTCACCATGTTTGGTCATCAGTAGCTGGATATaGATCCCATCTTTGCCAGAGACTGGCTTGGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: TCSPCLVISSWI*IPSLPETGLGK Trigger: TTTGCCCAAGCCAGTCTCTGGCAAAGATGGGATTCATATCCAGCTACTGATGACCAAACATGGTGAGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS TCA 72 bp | CAGTTGCCAATTTCTGACAGGGGCATGAGTTTCCATTaGGTGTCCAATGCTCCTAGACCTGTCCATCATGCA | + |
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Preference number: 6 (lower is better) Translates to: QLPISDRGMSFH*VSNAPRPVHHA Trigger: TGCATGATGGACAGGTCTAGGAGCATTGGACACTCAATGGAAACTCATGCCCCTGTCAGAAATTGGCAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS GCA 72 bp | ATACTTTTCACACATAGGTTGTTGGCTTTAGCCAAGTaGGACGGAGAAGGACAGGCATGTGTGAAGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: ILFTHRLLALAK*DGEGQACVKRP Trigger: AGGCCTCTTCACACATGCCTGTCCTTCTCCGTCGCACTTGGCTAAAGCCAACAACCTATGTGTGAAAAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CCA 72 bp | GTGAAGTTCGCGTTGAACAATAGTTCTCAACCGTGCTaGCGTACTGAAGTTACCCATTTGATGCCCACTGTG | + |
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Preference number: 6 (lower is better) Translates to: VKFALNNSSQPC*RTEVTHLMPTV Trigger: CACAGTGGGCATCAAATGGGTAACTTCAGTACGCCAGCACGGTTGAGAACTATTGTTCAACGCGAACTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CCA 72 bp | GCTTCCTCGGGACATAGGATACCTGCTCACCATGTTTaGTCATCAGTAGCTGGATATGAATCCCATCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: ASSGHRIPAHHV*SSVAGYESHLC Trigger: GCAAAGATGGGATTCATATCCAGCTACTGATGACCAAACATGGTGAGCAGGTATCCTATGTCCCGAGGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CAA 72 bp | TTAAGCTCCTCTAACGACTCTAACATGCGGTCAAGGTaGAGAACCACTGACATAGAAAGAACACCTCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: LSSSNDSNMRSR*RTTDIERTPRP Trigger: CGGCCGAGGTGTTCTTTCTATGTCAGTGGTTCTCAACCTTGACCGCATGTTAGAGTCGTTAGAGGAGCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CAA 72 bp | GTTGGAACAAGGCTGACATTTACAATGCACAGGAGCTaGGCTACTTCAGCAATTGCATGGCCACTGGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VGTRLTFTMHRS*ATSAIAWPLVF Trigger: GAACACCAGTGGCCATGCAATTGCTGAAGTAGCCAAGCTCCTGTGCATTGTAAATGTCAGCCTTGTTCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659311.1 |
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| CDS CAA 90 bp | AGCAGAGGTGTTGGAACAAGGCTGACATTTACAATGCACAGGAGCTaGGCTACTTCAGCAATTGCATGGCCACTGGTGTTCTGGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SRGVGTRLTFTMHRS*ATSAIAWPLVFWKN Trigger: ATTCTTCCAGAACACCAGTGGCCATGCAATTGCTGAAGTAGCCAAGCTCCTGTGCATTGTAAATGTCAGCCTTGTTCCAACACCTCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659311.1 |
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| CDS TCA 72 bp | CCATTGGCAAGAGAAACACCAGCACCACATTCTTGGTaGAAAGCCTCTTTCACAGAGAGAGTGCATTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PLARETPAPHSW*KASFTERVHSR Trigger: CCTTGAATGCACTCTCTCTGTGAAAGAGGCTTTTCACCAAGAATGTGGTGCTGGTGTTTCTCTTGCCAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS GCA 72 bp | TATGTGAAGTTCGCGTTGAACAATAGTTCTCAACCGTaGTGGCGTACTGAAGTTACCCATTTGATGCCCACT | + |
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Preference number: 6 (lower is better) Translates to: YVKFALNNSSQP*WRTEVTHLMPT Trigger: AGTGGGCATCAAATGGGTAACTTCAGTACGCCAGCACGGTTGAGAACTATTGTTCAACGCGAACTTCACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS GCA 72 bp | AGCAAGATCTGCAGAAATCCCCTAAGTAATTACTATTaGTACCATGACAGCAACAAGCCAGGCCACATCTGG | + |
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Preference number: 6 (lower is better) Translates to: SKICRNPLSNYY*YHDSNKPGHIW Trigger: CCAGATGTGGCCTGGCTTGTTGCTGTCATGGTAGCAATAGTAATTACTTAGGGGATTTCTGCAGATCTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS GCA 72 bp | ATTATCCAATTAACTCACAAGGGTTTCAATAGTTGTTaGGCAGTGCTCAGGCCTGTTAATCCCAGCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: IIQLTHKGFNSC*AVLRPVNPSTL Trigger: CAAAGTGCTGGGATTAACAGGCCTGAGCACTGCGCAACAACTATTGAAACCCTTGTGAGTTAATTGGATAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670683.1 |
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| CDS CCA 72 bp | GCTGGATATGAATCCCATCTTTGCCAGAGACTGGCTTaGGCAAATTATTTAACCACACCCTTTTTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AGYESHLCQRLA*ANYLTTPFFSF Trigger: GAAACTGAAAAAGGGTGTGGTTAAATAATTTGCCCAAGCCAGTCTCTGGCAAAGATGGGATTCATATCCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000399868.2 ENST00000660179.1 ENST00000664595.1 ENST00000670319.1 |
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| CDS CAA 72 bp | GAATTTTTCCATCTCTTTATACTTTTCACACATAGGTaGTTGGCTTTAGCCAAGTGCGACGGAGAAGGACAG | + |
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Preference number: 6 (lower is better) Translates to: EFFHLFILFTHR*LALAKCDGEGQ Trigger: CTGTCCTTCTCCGTCGCACTTGGCTAAAGCCAACAACCTATGTGTGAAAAGTATAAAGAGATGGAAAAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS TCA 72 bp | ATCTTTGATTCTGTAAGCCACTGGGATGTGTTCCCATaGAGTACTGGGACATTTCTTCACCTTCATATTCTT | + |
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Preference number: 6 (lower is better) Translates to: IFDSVSHWDVFP*STGTFLHLHIL Trigger: AAGAATATGAAGGTGAAGAAATGTCCCAGTACTTCATGGGAACACATCCCAGTGGCTTACAGAATCAAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670319.1 |
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| CDS CCA 72 bp | CATGCAAGGCTTGCAACTATGAGTGCCCTCCAACAATaGAACAGATGCAAAATAGAAATCATGTTATCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HARLATMSALQQ*NRCKIEIMLSD Trigger: ATCTGATAACATGATTTCTATTTTGCATCTGTTCCATTGTTGGAGGGCACTCATAGTTGCAAGCCTTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CAA 72 bp | ATCATGTTATCAGATGACGCCATAGTTGTCTCGCAATaGCTTTGCGGAAGGATTTTTCATGGGAATTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: IMLSDDAIVVSQ*LCGRIFHGNFS Trigger: GGAAAAATTCCCATGAAAAATCCTTCCGCAAAGCAATTGCGAGACAACTATGGCGTCATCTGATAACATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CAA 90 bp | CTACTCTGGAGAAAAGAGGTGATTAATACTTATGCTATTGGGTCTTaGAATGCTCTCAGCACCTATAGGTTATTAACTGAGACTCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLWRKEVINTYAIGS*NALSTYRLLTETLK Trigger: TTTGAGAGTCTCAGTTAATAACCTATAGGTGCTGAGAGCATTCAAAGACCCAATAGCATAAGTATTAATCACCTCTTTTCTCCAGAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CAA 90 bp | AAAGAACAAGTTGGAAGTGAAACTGAGCTCTTCCTGGTTTCTTATTaGCTACTCTGGAGAAAAGAGGTGATTAATACTTATGCTATTGGG | + |
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Preference number: 6 (lower is better) Translates to: KEQVGSETELFLVSY*LLWRKEVINTYAIG Trigger: CCCAATAGCATAAGTATTAATCACCTCTTTTCTCCAGAGTAGCAAATAAGAAACCAGGAAGAGCTCAGTTTCACTTCCAACTTGTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS GCA 72 bp | TTTTACATATGTACATGCAAGGCTTGCAACTATGAGTaGCCTCCAACAATGGAACAGATGCAAAATAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: FYICTCKACNYE*PPTMEQMQNRN Trigger: ATTTCTATTTTGCATCTGTTCCATTGTTGGAGGGCACTCATAGTTGCAAGCCTTGCATGTACATATGTAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CAA 72 bp | GTTGGAAGTGAAACTGAGCTCTTCCTGGTTTCTTATTaGCTACTCTGGAGAAAAGAGGTGATTAATACTTAT | + |
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Preference number: 6 (lower is better) Translates to: VGSETELFLVSY*LLWRKEVINTY Trigger: ATAAGTATTAATCACCTCTTTTCTCCAGAGTAGCAAATAAGAAACCAGGAAGAGCTCAGTTTCACTTCCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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| CDS CAA 72 bp | AGAAAAGAGGTGATTAATACTTATGCTATTGGGTCTTaGAATGCTCTCAGCACCTATAGGTTATTAACTGAG | + |
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Preference number: 6 (lower is better) Translates to: RKEVINTYAIGS*NALSTYRLLTE Trigger: CTCAGTTAATAACCTATAGGTGCTGAGAGCATTCAAAGACCCAATAGCATAAGTATTAATCACCTCTTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000399868.2 ENST00000670683.1 |
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