Pregenerated sensors for LINC02647 (Homo sapiens)
Ensembl gene IDs: ENSG00000223993Ensembl transcript IDs: ENST00000444137.1, ENST00000655081.1, ENST00000655477.1, ENST00000658106.1, ENST00000669767.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTCATGCTCTCAAGGCAAGGAGGCGCCCAGGCTTCCAACCTGTGCTaGGGACTCTGGATCAAGAGAGGGGACCGGAACCAGGCCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: LMLSRQGGAQASNLC*GLWIKRGDRNQAHS Trigger: TGAGTGGGCCTGGTTCCGGTCCCCTCTCTTGATCCAGAGTCCTCAGCACAGGTTGGAAGCCTGGGCGCCTCCTTGCCTTGAGAGCATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS TCA 90 bp | ATGGATCAACAGTGGGCGGGGAGATGCTTCCAGGCCTGTAGAACCTaGTATTCAGCCCAGCCAGCCACCGGGAGACCCCTTTGGTTACCA | + |
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Preference number: 5 (lower is better) Translates to: MDQQWAGRCFQACRT*YSAQPATGRPLWLP Trigger: TGGTAACCAAAGGGGTCTCCCGGTGGCTGGCTGGGCTGAATATCAGGTTCTACAGGCCTGGAAGCATCTCCCCGCCCACTGTTGATCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS GCA 90 bp | AGAATGATGCAGGGCTGTGCCAGAGCCTCATCAAAGGCAGAGGTATaGCAGGCACTGAGCTTCAGCACAGAGACTAGCAGAGCTTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: RMMQGCARASSKAEV*QALSFSTETSRASL Trigger: TAGGGAAGCTCTGCTAGTCTCTGTGCTGAAGCTCAGTGCCTGGCATACCTCTGCCTTTGATGAGGCTCTGGCACAGCCCTGCATCATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444137.1 ENST00000655081.1 |
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| CDS TCA 90 bp | CAGAGGTCAGTGGATCCTTTGACGCTTCCCATTGACTTTCCTCAGTaGAGCGAAGGAGATGGATCAACAGTGGGCGGGGAGATGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: QRSVDPLTLPIDFPQ*SEGDGSTVGGEMLP Trigger: TGGAAGCATCTCCCCGCCCACTGTTGATCCATCTCCTTCGCTTCACTGAGGAAAGTCAATGGGAAGCGTCAAAGGATCCACTGACCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS TCA 90 bp | ATACCAATGCACCTTCTTTTGCACTGTTGTTCAGCTTTGGAGGGCTaGACCAGCTTTGTGCAAGGCTGCAGAGCTGGGCCTGGAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IPMHLLLHCCSALEG*TSFVQGCRAGPGVQ Trigger: CTGGACTCCAGGCCCAGCTCTGCAGCCTTGCACAAAGCTGGTTCAGCCCTCCAAAGCTGAACAACAGTGCAAAAGAAGGTGCATTGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS TCA 90 bp | CAGAGAAATCCGACAGAGGTCAGTGGATCCTTTGACGCTTCCCATTaGCTTTCCTCAGTGAAGCGAAGGAGATGGATCAACAGTGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: QRNPTEVSGSFDASH*LSSVKRRRWINSGR Trigger: CCGCCCACTGTTGATCCATCTCCTTCGCTTCACTGAGGAAAGTCAATGGGAAGCGTCAAAGGATCCACTGACCTCTGTCGGATTTCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS TCA 90 bp | CTGGGAGTCTTTCCAGAGAAATCCGACAGAGGTCAGTGGATCCTTTaGCGCTTCCCATTGACTTTCCTCAGTGAAGCGAAGGAGATGGAT | + |
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Preference number: 5 (lower is better) Translates to: LGVFPEKSDRGQWIL*RFPLTFLSEAKEMD Trigger: ATCCATCTCCTTCGCTTCACTGAGGAAAGTCAATGGGAAGCGTCAAAGGATCCACTGACCTCTGTCGGATTTCTCTGGAAAGACTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS GCA 90 bp | GCAGATATGAAGTCAAGGCAAAAGAACCCGGAGCAACACGTAATCTaGGTATGTGGTGCCCAGGTTCCTGTATTCCACCTCCATGATTTC | + |
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Preference number: 5 (lower is better) Translates to: ADMKSRQKNPEQHVI*VCGAQVPVFHLHDF Trigger: GAAATCATGGAGGTGGAATACAGGAACCTGGGCACCACATACGCAGATTACGTGTTGCTCCGGGTTCTTTTGCCTTGACTTCATATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655477.1 ENST00000658106.1 |
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| CDS GCA 90 bp | AATAATCATGCTGAGGTGTCCCTTAACACTAGAAAAGGGGCATGCTaGTTTCCCACCAGGAAGTGTCCACTCATGCTCTCAAGGCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: NNHAEVSLNTRKGAC*FPTRKCPLMLSRQG Trigger: TCCTTGCCTTGAGAGCATGAGTGGACACTTCCTGGTGGGAAAGCAGCATGCCCCTTTTCTAGTGTTAAGGGACACCTCAGCATGATTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS CCA 90 bp | GAGACTAGCAGAGCTTCCCTACATCTCTCTGGAGCCCTCTCAGCATaGAAACATTGCAATGGGATGAGAGGAAAGAATGTAATTGTACCT | + |
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Preference number: 5 (lower is better) Translates to: ETSRASLHLSGALSA*KHCNGMRGKNVIVP Trigger: AGGTACAATTACATTCTTTCCTCTCATCCCATTGCAATGTTTCCATGCTGAGAGGGCTCCAGAGAGATGTAGGGAAGCTCTGCTAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444137.1 ENST00000655081.1 |
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| CDS TCA 90 bp | CGTAATCTGCGTATGTGGTGCCCAGGTTCCTGTATTCCACCTCCATaGTTTCTTGAATGTTCTCTTTTCTGTAACAACCAGTTGCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: RNLRMWCPGSCIPPP*FLECSLFCNNQLPC Trigger: ACAGGGCAACTGGTTGTTACAGAAAAGAGAACATTCAAGAAATCATGGAGGTGGAATACAGGAACCTGGGCACCACATACGCAGATTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655477.1 ENST00000658106.1 |
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| CDS GCA 90 bp | AGAGCTTCCCTACATCTCTCTGGAGCCCTCTCAGCATGGAAACATTaGAATGGGATGAGAGGAAAGAATGTAATTGTACCTCAAAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RASLHLSGALSAWKH*NGMRGKNVIVPQKR Trigger: CCTCTTTTGAGGTACAATTACATTCTTTCCTCTCATCCCATTGCAATGTTTCCATGCTGAGAGGGCTCCAGAGAGATGTAGGGAAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444137.1 ENST00000655081.1 |
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| CDS CCA 90 bp | ATTCTCACTGTACTCATGAGACTTCCTACGCCGATCACAATGGATTaGATAAAGGGTTGGTACCCGCCATTGAAAAGCCAGTCTAATAGC | + |
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Preference number: 5 (lower is better) Translates to: ILTVLMRLPTPITMD*IKGWYPPLKSQSNS Trigger: GCTATTAGACTGGCTTTTCAATGGCGGGTACCAACCCTTTATCCAATCCATTGTGATCGGCGTAGGAAGTCTCATGAGTACAGTGAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658106.1 |
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| CDS CCA 90 bp | ACCATTTATCTGCCCTCTTGCAATTTGCATTCTTGCATAGCCATTTaGTGCTTGCAGGAAAGCCTTCTTCTAAATCCCAGTAACAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: TIYLPSCNLHSCIAI*CLQESLLLNPSNKS Trigger: ACTTTTGTTACTGGGATTTAGAAGAAGGCTTTCCTGCAAGCACCAAATGGCTATGCAAGAATGCAAATTGCAAGAGGGCAGATAAATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655477.1 |
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| CDS GCA 90 bp | AACACTGAACAAAAATGTTCTGAGAGCCTATTATGCTTCCATTCCTaGGATGAAACGGTGAATAGAAACAGAATGAACCATTTATCTGCC | + |
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Preference number: 5 (lower is better) Translates to: NTEQKCSESLLCFHS*DETVNRNRMNHLSA Trigger: GGCAGATAAATGGTTCATTCTGTTTCTATTCACCGTTTCATCGCAGGAATGGAAGCATAATAGGCTCTCAGAACATTTTTGTTCAGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655477.1 ENST00000658106.1 |
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| CDS GCA 90 bp | GTTCATCAATTGAACACTGAACAAAAATGTTCTGAGAGCCTATTATaGTTCCATTCCTGCGATGAAACGGTGAATAGAAACAGAATGAAC | + |
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Preference number: 5 (lower is better) Translates to: VHQLNTEQKCSESLL*FHSCDETVNRNRMN Trigger: GTTCATTCTGTTTCTATTCACCGTTTCATCGCAGGAATGGAAGCATAATAGGCTCTCAGAACATTTTTGTTCAGTGTTCAATTGATGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655477.1 ENST00000658106.1 |
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| CDS TCA 72 bp | CAGTGGGCGGGGAGATGCTTCCAGGCCTGTAGAACCTaGTATTCAGCCCAGCCAGCCACCGGGAGACCCCTT | + |
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Preference number: 6 (lower is better) Translates to: QWAGRCFQACRT*YSAQPATGRPL Trigger: AAGGGGTCTCCCGGTGGCTGGCTGGGCTGAATATCAGGTTCTACAGGCCTGGAAGCATCTCCCCGCCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS GCA 72 bp | CAGGGCTGTGCCAGAGCCTCATCAAAGGCAGAGGTATaGCAGGCACTGAGCTTCAGCACAGAGACTAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: QGCARASSKAEV*QALSFSTETSR Trigger: TCTGCTAGTCTCTGTGCTGAAGCTCAGTGCCTGGCATACCTCTGCCTTTGATGAGGCTCTGGCACAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000444137.1 ENST00000655081.1 |
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| CDS CAA 90 bp | CTGGGCCTGGAGTCCAGGTACTTTGTGAAATCAGCTCACTGTAATTaGCGCCCTGCCTCTGTGACCCTCTGTGACCTCCTGCTGCAACTG | + |
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Preference number: 6 (lower is better) Translates to: LGLESRYFVKSAHCN*RPASVTLCDLLLQL Trigger: CAGTTGCAGCAGGAGGTCACAGAGGGTCACAGAGGCAGGGCGCAAATTACAGTGAGCTGATTTCACAAAGTACCTGGACTCCAGGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS TCA 72 bp | GTGGATCCTTTGACGCTTCCCATTGACTTTCCTCAGTaGAGCGAAGGAGATGGATCAACAGTGGGCGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VDPLTLPIDFPQ*SEGDGSTVGGE Trigger: CTCCCCGCCCACTGTTGATCCATCTCCTTCGCTTCACTGAGGAAAGTCAATGGGAAGCGTCAAAGGATCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS TCA 72 bp | CACCTTCTTTTGCACTGTTGTTCAGCTTTGGAGGGCTaGACCAGCTTTGTGCAAGGCTGCAGAGCTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: HLLLHCCSALEG*TSFVQGCRAGP Trigger: AGGCCCAGCTCTGCAGCCTTGCACAAAGCTGGTTCAGCCCTCCAAAGCTGAACAACAGTGCAAAAGAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS CAA 72 bp | CTGATATTCAGCCCAGCCAGCCACCGGGAGACCCCTTaGGTTACCATGGAAACAGCTAGTGCAGTACGAGTA | + |
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Preference number: 6 (lower is better) Translates to: LIFSPASHRETP*VTMETASAVRV Trigger: TACTCGTACTGCACTAGCTGTTTCCATGGTAACCAAAGGGGTCTCCCGGTGGCTGGCTGGGCTGAATATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS TCA 72 bp | CCAGGGGCATTCTTTAATGCGCAGGCAAATGAAGAATaGTGCAGGGCTGTGCCAGAGCCTCATCAAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PGAFFNAQANEE*CRAVPEPHQRQ Trigger: CTGCCTTTGATGAGGCTCTGGCACAGCCCTGCATCATTCTTCATTTGCCTGCGCATTAAAGAATGCCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000444137.1 ENST00000655081.1 |
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| CDS GCA 72 bp | GCTGAGGTGTCCCTTAACACTAGAAAAGGGGCATGCTaGTTTCCCACCAGGAAGTGTCCACTCATGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AEVSLNTRKGAC*FPTRKCPLMLS Trigger: TGAGAGCATGAGTGGACACTTCCTGGTGGGAAAGCAGCATGCCCCTTTTCTAGTGTTAAGGGACACCTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS CAA 72 bp | GAGTCCAGGTACTTTGTGAAATCAGCTCACTGTAATTaGCGCCCTGCCTCTGTGACCCTCTGTGACCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: ESRYFVKSAHCN*RPASVTLCDLL Trigger: CAGGAGGTCACAGAGGGTCACAGAGGCAGGGCGCAAATTACAGTGAGCTGATTTCACAAAGTACCTGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS CAA 90 bp | CAACCCCAGACCCCTGTCCTGAAGGGCTCATCAAATAAGGGAATCTaGTTTGCTGGGAGTCTTTCCAGAGAAATCCGACAGAGGTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: QPQTPVLKGSSNKGI*FAGSLSREIRQRSV Trigger: CACTGACCTCTGTCGGATTTCTCTGGAAAGACTCCCAGCAAACAAGATTCCCTTATTTGATGAGCCCTTCAGGACAGGGGTCTGGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS TCA 72 bp | CCGACAGAGGTCAGTGGATCCTTTGACGCTTCCCATTaGCTTTCCTCAGTGAAGCGAAGGAGATGGATCAAC | + |
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Preference number: 6 (lower is better) Translates to: PTEVSGSFDASH*LSSVKRRRWIN Trigger: GTTGATCCATCTCCTTCGCTTCACTGAGGAAAGTCAATGGGAAGCGTCAAAGGATCCACTGACCTCTGTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS TCA 72 bp | TTTCCAGAGAAATCCGACAGAGGTCAGTGGATCCTTTaGCGCTTCCCATTGACTTTCCTCAGTGAAGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: FPEKSDRGQWIL*RFPLTFLSEAK Trigger: CTTCGCTTCACTGAGGAAAGTCAATGGGAAGCGTCAAAGGATCCACTGACCTCTGTCGGATTTCTCTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS CAA 90 bp | TATTCTGGCAGTTATGCCAACCTGTCAGTGGCCATGTTTTCCACATaGTATCCTGGAGAGACTGAGGGGGCAGATATGAAGTCAAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: YSGSYANLSVAMFST*YPGETEGADMKSRQ Trigger: TTGCCTTGACTTCATATCTGCCCCCTCAGTCTCTCCAGGATACAATGTGGAAAACATGGCCACTGACAGGTTGGCATAACTGCCAGAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655477.1 ENST00000658106.1 |
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| CDS CAA 90 bp | GATCCAGGAAAATCACTTGATACCAATGCACCTTCTTTTGCACTGTaGTTCAGCTTTGGAGGGCTGAACCAGCTTTGTGCAAGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: DPGKSLDTNAPSFAL*FSFGGLNQLCARLQ Trigger: CTGCAGCCTTGCACAAAGCTGGTTCAGCCCTCCAAAGCTGAACAACAGTGCAAAAGAAGGTGCATTGGTATCAAGTGATTTTCCTGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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| CDS CCA 72 bp | CTTCCTACGCCGATCACAATGGATTGGATAAAGGGTTaGTACCCGCCATTGAAAAGCCAGTCTAATAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LPTPITMDWIKG*YPPLKSQSNSS Trigger: ACTGCTATTAGACTGGCTTTTCAATGGCGGGTACCAACCCTTTATCCAATCCATTGTGATCGGCGTAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658106.1 |
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| CDS CAA 72 bp | TGTACTCATGAGACTTCCTACGCCGATCACAATGGATaGGATAAAGGGTTGGTACCCGCCATTGAAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: CTHETSYADHNG*DKGLVPAIEKP Trigger: TGGCTTTTCAATGGCGGGTACCAACCCTTTATCCAATCCATTGTGATCGGCGTAGGAAGTCTCATGAGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658106.1 |
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| CDS CAA 72 bp | ACAGTTACAGGTAGGGGCTGTGATCCCTGGAACAGATaGCCCAATAAAAGCAAAGGCAGATTTCAAGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: TVTGRGCDPWNR*PNKSKGRFQVV Trigger: GACAACTTGAAATCTGCCTTTGCTTTTATTGGGCAATCTGTTCCAGGGATCACAGCCCCTACCTGTAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000444137.1 ENST00000655081.1 |
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| CDS CAA 72 bp | GGTGCCCAGGTTCCTGTATTCCACCTCCATGATTTCTaGAATGTTCTCTTTTCTGTAACAACCAGTTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GAQVPVFHLHDF*NVLFSVTTSCP Trigger: AGGGCAACTGGTTGTTACAGAAAAGAGAACATTCAAGAAATCATGGAGGTGGAATACAGGAACCTGGGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655477.1 ENST00000658106.1 |
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| CDS CAA 72 bp | GGGCATAGAAGGAGATTTTCTATTTGGTGGCCAAGTTaGCTGACAAGATCAGCTGCCTTTAGCATTTGTACG | + |
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Preference number: 6 (lower is better) Translates to: GHRRRFSIWWPS*LTRSAAFSICT Trigger: CGTACAAATGCTAAAGGCAGCTGATCTTGTCAGCAAACTTGGCCACCAAATAGAAAATCTCCTTCTATGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655081.1 ENST00000655477.1 ENST00000658106.1 ENST00000669767.1 |
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| CDS CAA 90 bp | TATCTGCCCTCTTGCAATTTGCATTCTTGCATAGCCATTTGGTGCTaGCAGGAAAGCCTTCTTCTAAATCCCAGTAACAAAAGTTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: YLPSCNLHSCIAIWC*QESLLLNPSNKSFV Trigger: GACAAAACTTTTGTTACTGGGATTTAGAAGAAGGCTTTCCTGCAAGCACCAAATGGCTATGCAAGAATGCAAATTGCAAGAGGGCAGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655477.1 |
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| CDS CAA 90 bp | AGAAACAGAATGAACCATTTATCTGCCCTCTTGCAATTTGCATTCTaGCATAGCCATTTGGTGCTTGCAGGAAAGCCTTCTTCTAAATCC | + |
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Preference number: 6 (lower is better) Translates to: RNRMNHLSALLQFAF*HSHLVLAGKPSSKS Trigger: GGATTTAGAAGAAGGCTTTCCTGCAAGCACCAAATGGCTATGCAAGAATGCAAATTGCAAGAGGGCAGATAAATGGTTCATTCTGTTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655477.1 |
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| CDS CAA 90 bp | TTAATAATACAGGCTTTCAGTGCTGAAAGGATCCAGGAAAATCACTaGATACCAATGCACCTTCTTTTGCACTGTTGTTCAGCTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LIIQAFSAERIQENH*IPMHLLLHCCSALE Trigger: CTCCAAAGCTGAACAACAGTGCAAAAGAAGGTGCATTGGTATCAAGTGATTTTCCTGGATCCTTTCAGCACTGAAAGCCTGTATTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669767.1 |
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