Pregenerated sensors for LINC02645 (Homo sapiens)
Ensembl gene IDs: ENSG00000234170Ensembl transcript IDs: ENST00000414107.6, ENST00000439973.2, ENST00000441907.2, ENST00000655634.1, ENST00000658961.1, ENST00000661232.1, ENST00000662131.1, ENST00000663504.1, ENST00000664302.1, ENST00000664791.1, ENST00000665692.1, ENST00000666064.1, ENST00000667195.1, ENST00000668732.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCCATGTGGTCCCTGCAGCAAGATGGCTTTCAGGCATGCACCACTaGCAGCTCCATGGGACACCAAGCAGTTCCCATTTATGCGCCGAC | + |
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Preference number: 5 (lower is better) Translates to: PHVVPAARWLSGMHH*QLHGTPSSSHLCAD Trigger: GTCGGCGCATAAATGGGAACTGCTTGGTGTCCCATGGAGCTGCCAGTGGTGCATGCCTGAAAGCCATCTTGCTGCAGGGACCACATGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 90 bp | GAGCACTGCCTGGCTTGCTGTCTGACAGATTTGGTGGTCCCCATGTaGTCCCTGCAGCAAGATGGCTTTCAGGCATGCACCACTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: EHCLACCLTDLVVPM*SLQQDGFQACTTGS Trigger: GCTGCCAGTGGTGCATGCCTGAAAGCCATCTTGCTGCAGGGACCACATGGGGACCACCAAATCTGTCAGACAGCAAGCCAGGCAGTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 90 bp | CCCTGCAGCAAGATGGCTTTCAGGCATGCACCACTGGCAGCTCCATaGGACACCAAGCAGTTCCCATTTATGCGCCGACGTCCTCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PCSKMAFRHAPLAAP*DTKQFPFMRRRPPK Trigger: CTTTGGAGGACGTCGGCGCATAAATGGGAACTGCTTGGTGTCCCATGGAGCTGCCAGTGGTGCATGCCTGAAAGCCATCTTGCTGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 90 bp | CTGTCTGACAGATTTGGTGGTCCCCATGTGGTCCCTGCAGCAAGATaGCTTTCAGGCATGCACCACTGGCAGCTCCATGGGACACCAAGC | + |
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Preference number: 5 (lower is better) Translates to: LSDRFGGPHVVPAAR*LSGMHHWQLHGTPS Trigger: GCTTGGTGTCCCATGGAGCTGCCAGTGGTGCATGCCTGAAAGCCATCTTGCTGCAGGGACCACATGGGGACCACCAAATCTGTCAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS TCA 90 bp | CATAGAGGAGGAAGTGGAGCTGTGAGCACTGCCTGGCTTGCTGTCTaGCAGATTTGGTGGTCCCCATGTGGTCCCTGCAGCAAGATGGCT | + |
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Preference number: 5 (lower is better) Translates to: HRGGSGAVSTAWLAV*QIWWSPCGPCSKMA Trigger: AGCCATCTTGCTGCAGGGACCACATGGGGACCACCAAATCTGTCAGACAGCAAGCCAGGCAGTGCTCACAGCTCCACTTCCTCCTCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS TCA 90 bp | AGAGCCAAGTCATCTGCCGTTGTCATAGAGGAGGAAGTGGAGCTGTaGGCACTGCCTGGCTTGCTGTCTGACAGATTTGGTGGTCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: RAKSSAVVIEEEVEL*ALPGLLSDRFGGPH Trigger: ATGGGGACCACCAAATCTGTCAGACAGCAAGCCAGGCAGTGCTCACAGCTCCACTTCCTCCTCTATGACAACGGCAGATGACTTGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 90 bp | AGGGAGGAGCAGCAGGAGTGGTCAGTTGGATCAGATCGCAGCAGGTaGATTTCACTTTCCTGTAGCCTCATCGTCCTAGCAATGGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: REEQQEWSVGSDRSR*ISLSCSLIVLAMAQ Trigger: CTGAGCCATTGCTAGGACGATGAGGCTACAGGAAAGTGAAATGCACCTGCTGCGATCTGATCCAACTGACCACTCCTGCTGCTCCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000414107.6 ENST00000439973.2 ENST00000441907.2 ENST00000658961.1 ENST00000662131.1 ENST00000663504.1 ENST00000664302.1 ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS CCA 90 bp | AAATTCACCAAAGCCTGGTTCGTGCCCCACAATGCCTTCGTCACTTaGGCAACTGAGCCTTCTGTTAAGCAGGGAGCTCGCAAGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: KFTKAWFVPHNAFVT*ATEPSVKQGARKPA Trigger: AGCTGGCTTGCGAGCTCCCTGCTTAACAGAAGGCTCAGTTGCCCAAGTGACGAAGGCATTGTGGGGCACGAACCAGGCTTTGGTGAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000655634.1 ENST00000658961.1 ENST00000661232.1 ENST00000663504.1 ENST00000664302.1 ENST00000664791.1 ENST00000666064.1 ENST00000667195.1 |
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| CDS TCA 90 bp | GGAGCAAACGCTATGGTAGCACCGGGAAGAACAGTGGGTGAGAGGTaGCCCCAAAGTTCAGGAATATTGCTTCTGACCCCACTTCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: GANAMVAPGRTVGER*PQSSGILLLTPLPQ Trigger: CTGAGGAAGTGGGGTCAGAAGCAATATTCCTGAACTTTGGGGTCACCTCTCACCCACTGTTCTTCCCGGTGCTACCATAGCGTTTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS CCA 90 bp | GAAGTTCTTAGCCCGGCAGCTCCGTTCAATACCGTGGAAGTCACGTaGATTCCAACACCCGCGGTCTTTCCCTTGGCTTTCAGGTGTATT | + |
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Preference number: 5 (lower is better) Translates to: EVLSPAAPFNTVEVT*IPTPAVFPLAFRCI Trigger: AATACACCTGAAAGCCAAGGGAAAGACCGCGGGTGTTGGAATCCACGTGACTTCCACGGTATTGAACGGAGCTGCCGGGCTAAGAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS TCA 90 bp | GGTTTGTGGAGCAAACGCTATGGTAGCACCGGGAAGAACAGTGGGTaGGAGGTGACCCCAAAGTTCAGGAATATTGCTTCTGACCCCACT | + |
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Preference number: 5 (lower is better) Translates to: GLWSKRYGSTGKNSG*EVTPKFRNIASDPT Trigger: AGTGGGGTCAGAAGCAATATTCCTGAACTTTGGGGTCACCTCTCACCCACTGTTCTTCCCGGTGCTACCATAGCGTTTGCTCCACAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS CCA 90 bp | GAAAAGAAATGGAAGTTCTTAGCCCGGCAGCTCCGTTCAATACCGTaGAAGTCACGTGGATTCCAACACCCGCGGTCTTTCCCTTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: EKKWKFLARQLRSIP*KSRGFQHPRSFPWL Trigger: AAGCCAAGGGAAAGACCGCGGGTGTTGGAATCCACGTGACTTCCACGGTATTGAACGGAGCTGCCGGGCTAAGAACTTCCATTTCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS TCA 90 bp | CATCTTCTTGCATCATATTGGCCTGGCCAAAGTGAGTCTTGGAACTaGGGCCAGGCGGAAGGTGGAACATCACTGCAATGTTCTGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: HLLASYWPGQSESWN*GQAEGGTSLQCSGE Trigger: TTCCCCAGAACATTGCAGTGATGTTCCACCTTCCGCCTGGCCTCAGTTCCAAGACTCACTTTGGCCAGGCCAATATGATGCAAGAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661232.1 |
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| CDS TCA 90 bp | AACACTTTCCCAGCATCTTCTTGCATCATATTGGCCTGGCCAAAGTaGGTCTTGGAACTGAGGCCAGGCGGAAGGTGGAACATCACTGCA | + |
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Preference number: 5 (lower is better) Translates to: NTFPASSCIILAWPK*VLELRPGGRWNITA Trigger: TGCAGTGATGTTCCACCTTCCGCCTGGCCTCAGTTCCAAGACTCACTTTGGCCAGGCCAATATGATGCAAGAAGATGCTGGGAAAGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661232.1 |
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| CDS GCA 90 bp | CAGTCTCGATGCCTCCACCTACTAGTGCCATGGGAACAACTAAGATaGTGGCACCATGGCATGTCACCAGAGGGGATTACAAGAATGGTT | + |
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Preference number: 5 (lower is better) Translates to: QSRCLHLLVPWEQLR*WHHGMSPEGITRMV Trigger: AACCATTCTTGTAATCCCCTCTGGTGACATGCCATGGTGCCAGCATCTTAGTTGTTCCCATGGCACTAGTAGGTGGAGGCATCGAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS GCA 90 bp | ATGCACCACTGGCAGCTCCATGGGACACCAAGCAGTTCCCATTTATaGGCCGACGTCCTCCAAAGTTTCCTGACTTCAAACATCTGTATG | + |
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Preference number: 5 (lower is better) Translates to: MHHWQLHGTPSSSHL*ADVLQSFLTSNICM Trigger: CATACAGATGTTTGAAGTCAGGAAACTTTGGAGGACGTCGGCGCATAAATGGGAACTGCTTGGTGTCCCATGGAGCTGCCAGTGGTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 90 bp | CGGGAAGTTTATTCATTGTGCAATTCCACGAAGAGCCAAGTCATCTaGCGTTGTCATAGAGGAGGAAGTGGAGCTGTGAGCACTGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: REVYSLCNSTKSQVI*RCHRGGSGAVSTAW Trigger: CCAGGCAGTGCTCACAGCTCCACTTCCTCCTCTATGACAACGGCAGATGACTTGGCTCTTCGTGGAATTGCACAATGAATAAACTTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 90 bp | TCTCGATGCCTCCACCTACTAGTGCCATGGGAACAACTAAGATGCTaGCACCATGGCATGTCACCAGAGGGGATTACAAGAATGGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: SRCLHLLVPWEQLRC*HHGMSPEGITRMVG Trigger: TCCAACCATTCTTGTAATCCCCTCTGGTGACATGCCATGGTGCCAGCATCTTAGTTGTTCCCATGGCACTAGTAGGTGGAGGCATCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS TCA 90 bp | CCCTTCCCTTCGGGAAGGCATGAAAGGAATACTGTACTTTCAGTATaGACCCAGCATCGAAGTCTTGGAACAAGCCTCTCAGGGGTCTTA | + |
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Preference number: 5 (lower is better) Translates to: PFPSGRHERNTVLSV*TQHRSLGTSLSGVL Trigger: TAAGACCCCTGAGAGGCTTGTTCCAAGACTTCGATGCTGGGTTCATACTGAAAGTACAGTATTCCTTTCATGCCTTCCCGAAGGGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 90 bp | CCTCCACCTACTAGTGCCATGGGAACAACTAAGATGCTGGCACCATaGCATGTCACCAGAGGGGATTACAAGAATGGTTGGAACAAAACA | + |
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Preference number: 5 (lower is better) Translates to: PPPTSAMGTTKMLAP*HVTRGDYKNGWNKT Trigger: TGTTTTGTTCCAACCATTCTTGTAATCCCCTCTGGTGACATGCCATGGTGCCAGCATCTTAGTTGTTCCCATGGCACTAGTAGGTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS TCA 90 bp | AAGCTTATAGGAATCCTTGAAAGTGGAATGCGTGATGTCCATCAGTaGCTTCAGGGTTTGTGGAGCAAACGCTATGGTAGCACCGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: KLIGILESGMRDVHQ*LQGLWSKRYGSTGK Trigger: CTTCCCGGTGCTACCATAGCGTTTGCTCCACAAACCCTGAAGTCACTGATGGACATCACGCATTCCACTTTCAAGGATTCCTATAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS TCA 90 bp | GTGAACACCTTCTTGGCCTGCACCATGTTTCTAGGACAAAGCTGCTaGGTGCTTTCCATGGATGTCAAGAGGCAGAAACTGGACTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: VNTFLACTMFLGQSC*VLSMDVKRQKLDLN Trigger: ATTCAAGTCCAGTTTCTGCCTCTTGACATCCATGGAAAGCACTCAGCAGCTTTGTCCTAGAAACATGGTGCAGGCCAAGAAGGTGTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664302.1 |
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| CDS TCA 90 bp | GCTGCTGAGTGCTTTCCATGGATGTCAAGAGGCAGAAACTGGACTTaGATTGAGATCTTCTCACTGGAAAACCCACAGCAGAATCACCAT | + |
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Preference number: 5 (lower is better) Translates to: AAECFPWMSRGRNWT*IEIFSLENPQQNHH Trigger: ATGGTGATTCTGCTGTGGGTTTTCCAGTGAGAAGATCTCAATTCAAGTCCAGTTTCTGCCTCTTGACATCCATGGAAAGCACTCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664302.1 |
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| CDS TCA 90 bp | ACAGATGAAAGTGTAATTCACCTAGGCCAGGGCAGCTACATCATTTaGGCCCTGAACTATGCAAGGTCAAAGGACGCGTTTCTCATACCA | + |
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Preference number: 5 (lower is better) Translates to: TDESVIHLGQGSYII*ALNYARSKDAFLIP Trigger: TGGTATGAGAAACGCGTCCTTTGACCTTGCATAGTTCAGGGCTCAAATGATGTAGCTGCCCTGGCCTAGGTGAATTACACTTTCATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS TCA 90 bp | CTCACGTCGCCTCCCATGTTGAGTTTCGTTTTGTCCAGGGTCCTGTaGCCTGTTTTACATTCATGTTTCTCTCTTCTTCATCTTGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: LTSPPMLSFVLSRVL*PVLHSCFSLLHLEN Trigger: GTTCTCAAGATGAAGAAGAGAGAAACATGAATGTAAAACAGGTCACAGGACCCTGGACAAAACGAAACTCAACATGGGAGGCGACGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661232.1 |
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| CDS TCA 90 bp | CACCAAGCAGTTCCCATTTATGCGCCGACGTCCTCCAAAGTTTCCTaGCTTCAAACATCTGTATGTCGAGGCACTTTTGCAAATGATGAA | + |
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Preference number: 5 (lower is better) Translates to: HQAVPIYAPTSSKVS*LQTSVCRGTFANDE Trigger: TTCATCATTTGCAAAAGTGCCTCGACATACAGATGTTTGAAGTCAGGAAACTTTGGAGGACGTCGGCGCATAAATGGGAACTGCTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 90 bp | GATTCACATCAGCGACTATCACTTGGTCGGGAAGTTTATTCATTGTaGAATTCCACGAAGAGCCAAGTCATCTGCCGTTGTCATAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: DSHQRLSLGREVYSL*NSTKSQVICRCHRG Trigger: TCCTCTATGACAACGGCAGATGACTTGGCTCTTCGTGGAATTGCACAATGAATAAACTTCCCGACCAAGTGATAGTCGCTGATGTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 90 bp | ATTGAAGCCAACTCTGGCATGTTACTTTTTAAAAGAAGGCTGTCCTaGCTCAAATGTCTGCTGGTTGTCTCTGTCACACAGCATGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: IEANSGMLLFKRRLS*LKCLLVVSVTQHAS Trigger: TGAAGCATGCTGTGTGACAGAGACAACCAGCAGACATTTGAGCCAGGACAGCCTTCTTTTAAAAAGTAACATGCCAGAGTTGGCTTCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661232.1 |
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| CDS CCA 90 bp | GAGATATTTTCCCCATGGGTAGGATTCACATCAGCGACTATCACTTaGTCGGGAAGTTTATTCATTGTGCAATTCCACGAAGAGCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: EIFSPWVGFTSATIT*SGSLFIVQFHEEPS Trigger: ACTTGGCTCTTCGTGGAATTGCACAATGAATAAACTTCCCGACCAAGTGATAGTCGCTGATGTGAATCCTACCCATGGGGAAAATATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 90 bp | CTTAGAATCATAGAGTTAGCAGGAACCTGCTGGAACAGAAATATATaGCATCCTCTTCAGACTCTGCCATTTAACAAAGAAGACGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LRIIELAGTCWNRNI*HPLQTLPFNKEDVP Trigger: TGGAACGTCTTCTTTGTTAAATGGCAGAGTCTGAAGAGGATGGCATATATTTCTGTTCCAGCAGGTTCCTGCTAACTCTATGATTCTAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 90 bp | ACATGGGATTTTGTTCCCAATGCTGGCATTCTAATCTCTGGCTTTTaGTCCTTCTCTGCATCCATTTGTAAGTACATTTCTTACACAAAG | + |
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Preference number: 5 (lower is better) Translates to: TWDFVPNAGILISGF*SFSASICKYISYTK Trigger: CTTTGTGTAAGAAATGTACTTACAAATGGATGCAGAGAAGGAGCAAAAGCCAGAGATTAGAATGCCAGCATTGGGAACAAAATCCCATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 90 bp | TTGGAAGAACTGTTTCTTAGAATCATAGAGTTAGCAGGAACCTGCTaGAACAGAAATATATGCCATCCTCTTCAGACTCTGCCATTTAAC | + |
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Preference number: 5 (lower is better) Translates to: LEELFLRIIELAGTC*NRNICHPLQTLPFN Trigger: GTTAAATGGCAGAGTCTGAAGAGGATGGCATATATTTCTGTTCCAGCAGGTTCCTGCTAACTCTATGATTCTAAGAAACAGTTCTTCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 90 bp | TTTTTGGAAGAACTGTTTCTTAGAATCATAGAGTTAGCAGGAACCTaGTGGAACAGAAATATATGCCATCCTCTTCAGACTCTGCCATTT | + |
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Preference number: 5 (lower is better) Translates to: FLEELFLRIIELAGT*WNRNICHPLQTLPF Trigger: AAATGGCAGAGTCTGAAGAGGATGGCATATATTTCTGTTCCAGCAGGTTCCTGCTAACTCTATGATTCTAAGAAACAGTTCTTCCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS TCA 90 bp | AGGACCCTATTTTGTCAGATCACCTATATGTATTTCAACATTCCGTaGTATTGCCTTGTCCTTCTTCATAAGCTTATAGGAATCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: RTLFCQITYMYFNIP*YCLVLLHKLIGILE Trigger: TTCAAGGATTCCTATAAGCTTATGAAGAAGGACAAGGCAATATCACGGAATGTTGAAATACATATAGGTGATCTGACAAAATAGGGTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS CCA 72 bp | AGCCCGGCAGCTCCGTTCAATACCGTGGAAGTCACGTaGATTCCAACACCCGCGGTCTTTCCCTTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SPAAPFNTVEVT*IPTPAVFPLAF Trigger: GAAAGCCAAGGGAAAGACCGCGGGTGTTGGAATCCACGTGACTTCCACGGTATTGAACGGAGCTGCCGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS CCA 72 bp | AGATTTGGTGGTCCCCATGTGGTCCCTGCAGCAAGATaGCTTTCAGGCATGCACCACTGGCAGCTCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: RFGGPHVVPAAR*LSGMHHWQLHG Trigger: CCCATGGAGCTGCCAGTGGTGCATGCCTGAAAGCCATCTTGCTGCAGGGACCACATGGGGACCACCAAATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CAA 72 bp | AGCTGTGAGCACTGCCTGGCTTGCTGTCTGACAGATTaGGTGGTCCCCATGTGGTCCCTGCAGCAAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: SCEHCLACCLTD*VVPMWSLQQDG Trigger: GCCATCTTGCTGCAGGGACCACATGGGGACCACCAAATCTGTCAGACAGCAAGCCAGGCAGTGCTCACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CAA 90 bp | AGGAAGTGGAGCTGTGAGCACTGCCTGGCTTGCTGTCTGACAGATTaGGTGGTCCCCATGTGGTCCCTGCAGCAAGATGGCTTTCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RKWSCEHCLACCLTD*VVPMWSLQQDGFQA Trigger: TGCCTGAAAGCCATCTTGCTGCAGGGACCACATGGGGACCACCAAATCTGTCAGACAGCAAGCCAGGCAGTGCTCACAGCTCCACTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 72 bp | AAAGCCTGGTTCGTGCCCCACAATGCCTTCGTCACTTaGGCAACTGAGCCTTCTGTTAAGCAGGGAGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: KAWFVPHNAFVT*ATEPSVKQGAR Trigger: GCGAGCTCCCTGCTTAACAGAAGGCTCAGTTGCCCAAGTGACGAAGGCATTGTGGGGCACGAACCAGGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000655634.1 ENST00000658961.1 ENST00000661232.1 ENST00000663504.1 ENST00000664302.1 ENST00000664791.1 ENST00000666064.1 ENST00000667195.1 |
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| CDS CCA 72 bp | CTGGCTTGCTGTCTGACAGATTTGGTGGTCCCCATGTaGTCCCTGCAGCAAGATGGCTTTCAGGCATGCACC | + |
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Preference number: 6 (lower is better) Translates to: LACCLTDLVVPM*SLQQDGFQACT Trigger: GGTGCATGCCTGAAAGCCATCTTGCTGCAGGGACCACATGGGGACCACCAAATCTGTCAGACAGCAAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 72 bp | CCTCATCGTCCTAGCAATGGCTCAGCATTCCAACCATaGAAGCTGCAGAGGAGAGTAGAGGGACGCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: PHRPSNGSAFQP*KLQRRVEGRWM Trigger: CATCCAGCGTCCCTCTACTCTCCTCTGCAGCTTCCATGGTTGGAATGCTGAGCCATTGCTAGGACGATGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000414107.6 ENST00000441907.2 ENST00000658961.1 ENST00000662131.1 ENST00000663504.1 ENST00000664302.1 ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS CCA 72 bp | CTGAGGTGCAAGGGAGGAGCAGCAGGAGTGGTCAGTTaGATCAGATCGCAGCAGGTGCATTTCACTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LRCKGGAAGVVS*IRSQQVHFTFL Trigger: CAGGAAAGTGAAATGCACCTGCTGCGATCTGATCCAACTGACCACTCCTGCTGCTCCTCCCTTGCACCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000414107.6 ENST00000439973.2 ENST00000441907.2 ENST00000658961.1 ENST00000662131.1 ENST00000663504.1 ENST00000664302.1 ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS CCA 72 bp | TGGAAGTTCTTAGCCCGGCAGCTCCGTTCAATACCGTaGAAGTCACGTGGATTCCAACACCCGCGGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: WKFLARQLRSIP*KSRGFQHPRSF Trigger: GAAAGACCGCGGGTGTTGGAATCCACGTGACTTCCACGGTATTGAACGGAGCTGCCGGGCTAAGAACTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS CCA 72 bp | AAGATGGCTTTCAGGCATGCACCACTGGCAGCTCCATaGGACACCAAGCAGTTCCCATTTATGCGCCGACGT | + |
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Preference number: 6 (lower is better) Translates to: KMAFRHAPLAAP*DTKQFPFMRRR Trigger: ACGTCGGCGCATAAATGGGAACTGCTTGGTGTCCCATGGAGCTGCCAGTGGTGCATGCCTGAAAGCCATCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 72 bp | GTCCCTGCAGCAAGATGGCTTTCAGGCATGCACCACTaGCAGCTCCATGGGACACCAAGCAGTTCCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: VPAARWLSGMHH*QLHGTPSSSHL Trigger: TAAATGGGAACTGCTTGGTGTCCCATGGAGCTGCCAGTGGTGCATGCCTGAAAGCCATCTTGCTGCAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CAA 90 bp | AAGGAGATGCCTGAGGTGCAAGGGAGGAGCAGCAGGAGTGGTCAGTaGGATCAGATCGCAGCAGGTGCATTTCACTTTCCTGTAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: KEMPEVQGRSSRSGQ*DQIAAGAFHFPVAS Trigger: TGAGGCTACAGGAAAGTGAAATGCACCTGCTGCGATCTGATCCAACTGACCACTCCTGCTGCTCCTCCCTTGCACCTCAGGCATCTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000414107.6 ENST00000439973.2 ENST00000441907.2 ENST00000658961.1 ENST00000662131.1 ENST00000663504.1 ENST00000664302.1 ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS TCA 72 bp | CCAGCATCTTCTTGCATCATATTGGCCTGGCCAAAGTaGGTCTTGGAACTGAGGCCAGGCGGAAGGTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PASSCIILAWPK*VLELRPGGRWN Trigger: GTTCCACCTTCCGCCTGGCCTCAGTTCCAAGACTCACTTTGGCCAGGCCAATATGATGCAAGAAGATGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661232.1 |
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| CDS GCA 72 bp | AAGTGTTTCCTCCAGATTGGAAGGAGATGCCTGAGGTaGAAGGGAGGAGCAGCAGGAGTGGTCAGTTGGATC | + |
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Preference number: 6 (lower is better) Translates to: KCFLQIGRRCLR*KGGAAGVVSWI Trigger: GATCCAACTGACCACTCCTGCTGCTCCTCCCTTGCACCTCAGGCATCTCCTTCCAATCTGGAGGAAACACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000414107.6 ENST00000439973.2 ENST00000441907.2 ENST00000658961.1 ENST00000662131.1 ENST00000663504.1 ENST00000664302.1 ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS CCA 72 bp | AGGCCAGGCGGAAGGTGGAACATCACTGCAATGTTCTaGGGAAAAGGGCAAACATTCTTGGAAGGGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: RPGGRWNITAMF*GKGQTFLEGDQ Trigger: CTGGTCCCCTTCCAAGAATGTTTGCCCTTTTCCCCAGAACATTGCAGTGATGTTCCACCTTCCGCCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661232.1 |
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| CDS TCA 72 bp | GCTATGGTAGCACCGGGAAGAACAGTGGGTGAGAGGTaGCCCCAAAGTTCAGGAATATTGCTTCTGACCCCA | + |
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Preference number: 6 (lower is better) Translates to: AMVAPGRTVGER*PQSSGILLLTP Trigger: TGGGGTCAGAAGCAATATTCCTGAACTTTGGGGTCACCTCTCACCCACTGTTCTTCCCGGTGCTACCATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS TCA 72 bp | GCATCATATTGGCCTGGCCAAAGTGAGTCTTGGAACTaGGGCCAGGCGGAAGGTGGAACATCACTGCAATGT | + |
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Preference number: 6 (lower is better) Translates to: ASYWPGQSESWN*GQAEGGTSLQC Trigger: ACATTGCAGTGATGTTCCACCTTCCGCCTGGCCTCAGTTCCAAGACTCACTTTGGCCAGGCCAATATGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661232.1 |
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| CDS GCA 72 bp | CAGCAGGAGTGGTCAGTTGGATCAGATCGCAGCAGGTaGATTTCACTTTCCTGTAGCCTCATCGTCCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: QQEWSVGSDRSR*ISLSCSLIVLA Trigger: TGCTAGGACGATGAGGCTACAGGAAAGTGAAATGCACCTGCTGCGATCTGATCCAACTGACCACTCCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000414107.6 ENST00000439973.2 ENST00000441907.2 ENST00000658961.1 ENST00000662131.1 ENST00000663504.1 ENST00000664302.1 ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS GCA 72 bp | TGCCTCCACCTACTAGTGCCATGGGAACAACTAAGATaGTGGCACCATGGCATGTCACCAGAGGGGATTACA | + |
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Preference number: 6 (lower is better) Translates to: CLHLLVPWEQLR*WHHGMSPEGIT Trigger: TGTAATCCCCTCTGGTGACATGCCATGGTGCCAGCATCTTAGTTGTTCCCATGGCACTAGTAGGTGGAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS GCA 72 bp | TGGCAGCTCCATGGGACACCAAGCAGTTCCCATTTATaGGCCGACGTCCTCCAAAGTTTCCTGACTTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: WQLHGTPSSSHL*ADVLQSFLTSN Trigger: GTTTGAAGTCAGGAAACTTTGGAGGACGTCGGCGCATAAATGGGAACTGCTTGGTGTCCCATGGAGCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS TCA 72 bp | ACACTGTATGATTTACGTTCTGTAGTGCACCGGTGGTaGGTCAGGCTTACCCCCACGGTAAAGACAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TLYDLRSVVHRW*VRLTPTVKTGK Trigger: CTTCCCTGTCTTTACCGTGGGGGTAAGCCTGACTCACCACCGGTGCACTACAGAACGTAAATCATACAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 72 bp | GATTCCCTGCAAGAAGAGAGGACACAGCAGTCTCGATaGCTCCACCTACTAGTGCCATGGGAACAACTAAGA | + |
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Preference number: 6 (lower is better) Translates to: DSLQEERTQQSR*LHLLVPWEQLR Trigger: TCTTAGTTGTTCCCATGGCACTAGTAGGTGGAGGCATCGAGACTGCTGTGTCCTCTCTTCTTGCAGGGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS GCA 72 bp | AGGCCAGGGCAGCTACATCATTTGAGCCCTGAACTATaGAAGGTCAAAGGACGCGTTTCTCATACCACCCTT | + |
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Preference number: 6 (lower is better) Translates to: RPGQLHHLSPEL*KVKGRVSHTTL Trigger: AAGGGTGGTATGAGAAACGCGTCCTTTGACCTTGCATAGTTCAGGGCTCAAATGATGTAGCTGCCCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 72 bp | CTCCACCTACTAGTGCCATGGGAACAACTAAGATGCTaGCACCATGGCATGTCACCAGAGGGGATTACAAGA | + |
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Preference number: 6 (lower is better) Translates to: LHLLVPWEQLRC*HHGMSPEGITR Trigger: TCTTGTAATCCCCTCTGGTGACATGCCATGGTGCCAGCATCTTAGTTGTTCCCATGGCACTAGTAGGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS CAA 72 bp | TGGACACTGAGTGAGCTCCTTGCAACTGAGGTGTCCTaGACTTTGAGCCCTTTCACCTCAACAACAAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: WTLSELLATEVS*TLSPFTSTTKR Trigger: GCGCTTTGTTGTTGAGGTGAAAGGGCTCAAAGTCAAGGACACCTCAGTTGCAAGGAGCTCACTCAGTGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663504.1 |
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| CDS TCA 72 bp | AGCAAACGCTATGGTAGCACCGGGAAGAACAGTGGGTaGGAGGTGACCCCAAAGTTCAGGAATATTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SKRYGSTGKNSG*EVTPKFRNIAS Trigger: AGAAGCAATATTCCTGAACTTTGGGGTCACCTCTCACCCACTGTTCTTCCCGGTGCTACCATAGCGTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS TCA 72 bp | GGAATCCTTGAAAGTGGAATGCGTGATGTCCATCAGTaGCTTCAGGGTTTGTGGAGCAAACGCTATGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: GILESGMRDVHQ*LQGLWSKRYGS Trigger: GCTACCATAGCGTTTGCTCCACAAACCCTGAAGTCACTGATGGACATCACGCATTCCACTTTCAAGGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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| CDS TCA 72 bp | TTCTTGGCCTGCACCATGTTTCTAGGACAAAGCTGCTaGGTGCTTTCCATGGATGTCAAGAGGCAGAAACTG | + |
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Preference number: 6 (lower is better) Translates to: FLACTMFLGQSC*VLSMDVKRQKL Trigger: CAGTTTCTGCCTCTTGACATCCATGGAAAGCACTCAGCAGCTTTGTCCTAGAAACATGGTGCAGGCCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664302.1 |
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| CDS TCA 72 bp | AGTGTAATTCACCTAGGCCAGGGCAGCTACATCATTTaGGCCCTGAACTATGCAAGGTCAAAGGACGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: SVIHLGQGSYII*ALNYARSKDAF Trigger: AAACGCGTCCTTTGACCTTGCATAGTTCAGGGCTCAAATGATGTAGCTGCCCTGGCCTAGGTGAATTACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 72 bp | GTGTATAATGAGATAAATTCACCAAAGCCTGGTTCGTaGCCCACAATGCCTTCGTCACTTGGGCAACTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VYNEINSPKPGS*PTMPSSLGQLS Trigger: GCTCAGTTGCCCAAGTGACGAAGGCATTGTGGGGCACGAACCAGGCTTTGGTGAATTTATCTCATTATACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000655634.1 ENST00000658961.1 ENST00000661232.1 ENST00000663504.1 ENST00000664302.1 ENST00000664791.1 ENST00000666064.1 ENST00000667195.1 |
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| CDS GCA 72 bp | TATTCATTGTGCAATTCCACGAAGAGCCAAGTCATCTaGCGTTGTCATAGAGGAGGAAGTGGAGCTGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: YSLCNSTKSQVI*RCHRGGSGAVS Trigger: GCTCACAGCTCCACTTCCTCCTCTATGACAACGGCAGATGACTTGGCTCTTCGTGGAATTGCACAATGAATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS TCA 72 bp | GTTCCCATTTATGCGCCGACGTCCTCCAAAGTTTCCTaGCTTCAAACATCTGTATGTCGAGGCACTTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: VPIYAPTSSKVS*LQTSVCRGTFA Trigger: TGCAAAAGTGCCTCGACATACAGATGTTTGAAGTCAGGAAACTTTGGAGGACGTCGGCGCATAAATGGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 72 bp | CAGCGACTATCACTTGGTCGGGAAGTTTATTCATTGTaGAATTCCACGAAGAGCCAAGTCATCTGCCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: QRLSLGREVYSL*NSTKSQVICRC Trigger: ACAACGGCAGATGACTTGGCTCTTCGTGGAATTGCACAATGAATAAACTTCCCGACCAAGTGATAGTCGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CAA 72 bp | CATCAGCGACTATCACTTGGTCGGGAAGTTTATTCATaGTGCAATTCCACGAAGAGCCAAGTCATCTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: HQRLSLGREVYS*CNSTKSQVICR Trigger: ACGGCAGATGACTTGGCTCTTCGTGGAATTGCACAATGAATAAACTTCCCGACCAAGTGATAGTCGCTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS TCA 72 bp | AGTGAGGTTTGTATTCACAACCTGCATGCCTTTGACTaGTGTTTCTCTCCAGGGCTCTCACATCAGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SEVCIHNLHAFD*CFSPGLSHQLH Trigger: ATGAAGCTGATGTGAGAGCCCTGGAGAGAAACATCAGTCAAAGGCATGCAGGTTGTGAATACAAACCTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS TCA 72 bp | TCGGGAAGGCATGAAAGGAATACTGTACTTTCAGTATaGACCCAGCATCGAAGTCTTGGAACAAGCCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGRHERNTVLSV*TQHRSLGTSLS Trigger: TGAGAGGCTTGTTCCAAGACTTCGATGCTGGGTTCATACTGAAAGTACAGTATTCCTTTCATGCCTTCCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CCA 72 bp | TCCCCATGGGTAGGATTCACATCAGCGACTATCACTTaGTCGGGAAGTTTATTCATTGTGCAATTCCACGAA | + |
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Preference number: 6 (lower is better) Translates to: SPWVGFTSATIT*SGSLFIVQFHE Trigger: TTCGTGGAATTGCACAATGAATAAACTTCCCGACCAAGTGATAGTCGCTGATGTGAATCCTACCCATGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CAA 72 bp | CAGTTAGTGAATCCCACTGGGACACCAGTGTCATCCTaGTCCTCTGTTGTACAGAGCTTCCTGTCAAATATT | + |
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Preference number: 6 (lower is better) Translates to: QLVNPTGTPVSS*SSVVQSFLSNI Trigger: AATATTTGACAGGAAGCTCTGTACAACAGAGGACAAGGATGACACTGGTGTCCCAGTGGGATTCACTAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CAA 72 bp | TTCCCCATGGGTAGGATTCACATCAGCGACTATCACTaGGTCGGGAAGTTTATTCATTGTGCAATTCCACGA | + |
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Preference number: 6 (lower is better) Translates to: FPMGRIHISDYH*VGKFIHCAIPR Trigger: TCGTGGAATTGCACAATGAATAAACTTCCCGACCAAGTGATAGTCGCTGATGTGAATCCTACCCATGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CAA 90 bp | TCTGTCTGGAAACAAGTGAGGTTTGTATTCACAACCTGCATGCCTTaGACTGATGTTTCTCTCCAGGGCTCTCACATCAGCTTCATTATC | + |
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Preference number: 6 (lower is better) Translates to: SVWKQVRFVFTTCMP*TDVSLQGSHISFII Trigger: GATAATGAAGCTGATGTGAGAGCCCTGGAGAGAAACATCAGTCAAAGGCATGCAGGTTGTGAATACAAACCTCACTTGTTTCCAGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS CCA 72 bp | TCTTCCACATATGTAACATCAGTTAGTGAATCCCACTaGGACACCAGTGTCATCCTTGTCCTCTGTTGTACA | + |
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Preference number: 6 (lower is better) Translates to: SSTYVTSVSESH*DTSVILVLCCT Trigger: TGTACAACAGAGGACAAGGATGACACTGGTGTCCCAGTGGGATTCACTAACTGATGTTACATATGTGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 72 bp | CATTTAATTCTGAAGCCTGACTTACAGGCTAAGAAGTaGATATACTCAGGGCACACACTTCAGTCTAGACTT | + |
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Preference number: 6 (lower is better) Translates to: HLILKPDLQAKK*IYSGHTLQSRL Trigger: AAGTCTAGACTGAAGTGTGTGCCCTGAGTATATGCACTTCTTAGCCTGTAAGTCAGGCTTCAGAATTAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661232.1 |
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| CDS CCA 72 bp | CTGTTTCTTAGAATCATAGAGTTAGCAGGAACCTGCTaGAACAGAAATATATGCCATCCTCTTCAGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LFLRIIELAGTC*NRNICHPLQTL Trigger: CAGAGTCTGAAGAGGATGGCATATATTTCTGTTCCAGCAGGTTCCTGCTAACTCTATGATTCTAAGAAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 72 bp | CTAGTGTGTTTTCTAACTGTATTTACAGCTCTTTCGTaGCCATCTCTCCAATTCTACCAGGTAATGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: LVCFLTVFTALS*PSLQFYQVMYL Trigger: CAAGTACATTACCTGGTAGAATTGGAGAGATGGGCACGAAAGAGCTGTAAATACAGTTAGAAAACACACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000414107.6 ENST00000439973.2 ENST00000441907.2 ENST00000658961.1 ENST00000662131.1 ENST00000664302.1 ENST00000664791.1 ENST00000667195.1 ENST00000668732.1 |
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| CDS GCA 72 bp | TTTGTTCCCAATGCTGGCATTCTAATCTCTGGCTTTTaGTCCTTCTCTGCATCCATTTGTAAGTACATTTCT | + |
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Preference number: 6 (lower is better) Translates to: FVPNAGILISGF*SFSASICKYIS Trigger: AGAAATGTACTTACAAATGGATGCAGAGAAGGAGCAAAAGCCAGAGATTAGAATGCCAGCATTGGGAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 72 bp | ATAGAGTTAGCAGGAACCTGCTGGAACAGAAATATATaGCATCCTCTTCAGACTCTGCCATTTAACAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: IELAGTCWNRNI*HPLQTLPFNKE Trigger: TTCTTTGTTAAATGGCAGAGTCTGAAGAGGATGGCATATATTTCTGTTCCAGCAGGTTCCTGCTAACTCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS GCA 72 bp | GAACTGTTTCTTAGAATCATAGAGTTAGCAGGAACCTaGTGGAACAGAAATATATGCCATCCTCTTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: ELFLRIIELAGT*WNRNICHPLQT Trigger: AGTCTGAAGAGGATGGCATATATTTCTGTTCCAGCAGGTTCCTGCTAACTCTATGATTCTAAGAAACAGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS CAA 90 bp | TTTATCTTGGAAAATATCGTGCAGAATACAGCCATGATCAAATTTTaGGAAGAACTGTTTCTTAGAATCATAGAGTTAGCAGGAACCTGC | + |
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Preference number: 6 (lower is better) Translates to: FILENIVQNTAMIKF*EELFLRIIELAGTC Trigger: GCAGGTTCCTGCTAACTCTATGATTCTAAGAAACAGTTCTTCCAAAAATTTGATCATGGCTGTATTCTGCACGATATTTTCCAAGATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655634.1 |
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| CDS TCA 72 bp | TTTTGTCAGATCACCTATATGTATTTCAACATTCCGTaGTATTGCCTTGTCCTTCTTCATAAGCTTATAGGA | + |
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Preference number: 6 (lower is better) Translates to: FCQITYMYFNIP*YCLVLLHKLIG Trigger: TCCTATAAGCTTATGAAGAAGGACAAGGCAATATCACGGAATGTTGAAATACATATAGGTGATCTGACAAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665692.1 |
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