Pregenerated sensors for LINC02643 (Homo sapiens)

Ensembl gene IDs: ENSG00000230109

Ensembl transcript IDs: ENST00000433460.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GATTGGTCCAGATCGCGTCTCCTGCCTGTTCTTAGGCCAATCACTTaGAAGGTTCTCCAGCTCCGTGAGAGAAGAACGCAGACTTCCTCA	+
Preference number: 5 (lower is better) Translates to: DWSRSRLLPVLRPIT*KVLQLRERRTQTSS Trigger: TGAGGAAGTCTGCGTTCTTCTCTCACGGAGCTGGAGAACCTTTCAAGTGATTGGCCTAAGAACAGGCAGGAGACGCGATCTGGACCAATC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433460.1
CDS GCA 90 bp	CCACCATCTCAATGTAAGTTTCTGATTGGTCCAGATCGCGTCTCCTaGCTGTTCTTAGGCCAATCACTTGAAAGGTTCTCCAGCTCCGTG	+
Preference number: 5 (lower is better) Translates to: PPSQCKFLIGPDRVS*LFLGQSLERFSSSV Trigger: CACGGAGCTGGAGAACCTTTCAAGTGATTGGCCTAAGAACAGGCAGGAGACGCGATCTGGACCAATCAGAAACTTACATTGAGATGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433460.1
CDS TCA 72 bp	AGATCGCGTCTCCTGCCTGTTCTTAGGCCAATCACTTaGAAGGTTCTCCAGCTCCGTGAGAGAAGAACGCAG	+
Preference number: 6 (lower is better) Translates to: RSRLLPVLRPIT*KVLQLRERRTQ Trigger: CTGCGTTCTTCTCTCACGGAGCTGGAGAACCTTTCAAGTGATTGGCCTAAGAACAGGCAGGAGACGCGATCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433460.1
CDS CCA 72 bp	GATGTGACTCCAACCAGGAGCTGCAGCCTAGACCACTaGAATGAGCCCTGTAATTCCAGTTACTCAAGGAGG	+
Preference number: 6 (lower is better) Translates to: DVTPTRSCSLDH*NEPCNSSYSRR Trigger: CCTCCTTGAGTAACTGGAATTACAGGGCTCATTCCAGTGGTCTAGGCTGCAGCTCCTGGTTGGAGTCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433460.1

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