Pregenerated sensors for LINC02642 (Homo sapiens)
Ensembl gene IDs: ENSG00000232591Ensembl transcript IDs: ENST00000420395.1, ENST00000660269.1, ENST00000670632.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCTCTACCGGGTGGGGCTGTGGACAGACTCAGCAGAGCATTTATTaGGGCGGCTTTGCAGCAGCCGTTTCTAAGGAGATGGTGCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LSTGWGCGQTQQSIY*GGFAAAVSKEMVPE Trigger: CTCAGGCACCATCTCCTTAGAAACGGCTGCTGCAAAGCCGCCGCAATAAATGCTCTGCTGAGTCTGTCCACAGCCCCACCCGGTAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CCA 90 bp | GCAGAGCGCCGTGCATCAGACGATCGATGCGTATTCGCAGCAAATTaGCCATTCAGCAGTGCCGTGCAGGAACCTCGGAGGCACAGATAC | + |
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Preference number: 5 (lower is better) Translates to: AERRASDDRCVFAAN*PFSSAVQEPRRHRY Trigger: GTATCTGTGCCTCCGAGGTTCCTGCACGGCACTGCTGAATGGCCAATTTGCTGCGAATACGCATCGATCGTCTGATGCACGGCGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS GCA 90 bp | CTTCACGGTGTCCTCAGTGCAGAGCGCCGTGCATCAGACGATCGATaGGTATTCGCAGCAAATTGGCCATTCAGCAGTGCCGTGCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LHGVLSAERRASDDR*VFAANWPFSSAVQE Trigger: TTCCTGCACGGCACTGCTGAATGGCCAATTTGCTGCGAATACGCATCGATCGTCTGATGCACGGCGCTCTGCACTGAGGACACCGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CCA 90 bp | GGTAGAGCTGGAACAGACAAGGAAGGGATTCTCCCTGAGAGCCTCTaGCACGGGCAGCCCTTCAAACACCTCCATGTGTGCCCAGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: GRAGTDKEGILPESL*HGQPFKHLHVCPVK Trigger: TTTCACTGGGCACACATGGAGGTGTTTGAAGGGCTGCCCGTGCCAGAGGCTCTCAGGGAGAATCCCTTCCTTGTCTGTTCCAGCTCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000420395.1 ENST00000660269.1 ENST00000670632.1 |
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| CDS CCA 90 bp | TGCCAGAGTTTCCTGGCTTTGTCCCTTAGTGGCCTCTCTACCGGGTaGGGCTGTGGACAGACTCAGCAGAGCATTTATTGCGGCGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: CQSFLALSLSGLSTG*GCGQTQQSIYCGGF Trigger: AAAGCCGCCGCAATAAATGCTCTGCTGAGTCTGTCCACAGCCCCACCCGGTAGAGAGGCCACTAAGGGACAAAGCCAGGAAACTCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS GCA 90 bp | CTAACCCCTGGAATGAACCACGGTTCATCTTCACGGTGTCCTCAGTaGAGAGCGCCGTGCATCAGACGATCGATGCGTATTCGCAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: LTPGMNHGSSSRCPQ*RAPCIRRSMRIRSK Trigger: TTTGCTGCGAATACGCATCGATCGTCTGATGCACGGCGCTCTGCACTGAGGACACCGTGAAGATGAACCGTGGTTCATTCCAGGGGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS GCA 90 bp | ATCAGACGATCGATGCGTATTCGCAGCAAATTGGCCATTCAGCAGTaGCGTGCAGGAACCTCGGAGGCACAGATACGGAACAGCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: IRRSMRIRSKLAIQQ*RAGTSEAQIRNSFS Trigger: AGAAAAGCTGTTCCGTATCTGTGCCTCCGAGGTTCCTGCACGGCACTGCTGAATGGCCAATTTGCTGCGAATACGCATCGATCGTCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CCA 90 bp | AACCCCTTTTGTCTCAGAGTCCTAGTTCCACTCCTCAGCAGTTCCTaGTGTACCTTCCAGATACTGTCCACAGCAGAGGAGGAGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: NPFCLRVLVPLLSSS*CTFQILSTAEEEVE Trigger: CTCTACCTCCTCCTCTGCTGTGGACAGTATCTGGAAGGTACACCAGGAACTGCTGAGGAGTGGAACTAGGACTCTGAGACAAAAGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660269.1 |
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| CDS TCA 90 bp | CCTGCTTCATTTGGGGAGTTTTTAGGAATCCAGTCGTCTGAGACATaGTACAGCATCAGCATGGTCGCAGCCACTCATAAAGCCTGGATC | + |
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Preference number: 5 (lower is better) Translates to: PASFGEFLGIQSSET*YSISMVAATHKAWI Trigger: GATCCAGGCTTTATGAGTGGCTGCGACCATGCTGATGCTGTATCATGTCTCAGACGACTGGATTCCTAAAAACTCCCCAAATGAAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670632.1 |
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| CDS CCA 90 bp | GATAAATGGTCGTTCACTTTCCAGTTTCAGAACTCAGCTAACCCCTaGAATGAACCACGGTTCATCTTCACGGTGTCCTCAGTGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: DKWSFTFQFQNSANP*NEPRFIFTVSSVQS Trigger: GCTCTGCACTGAGGACACCGTGAAGATGAACCGTGGTTCATTCCAGGGGTTAGCTGAGTTCTGAAACTGGAAAGTGAACGACCATTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CCA 90 bp | CCGCTGGCTGTGTTCCAGCACAGTTCTGTTTCACCTACTGATAAATaGTCGTTCACTTTCCAGTTTCAGAACTCAGCTAACCCCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: PLAVFQHSSVSPTDK*SFTFQFQNSANPWN Trigger: ATTCCAGGGGTTAGCTGAGTTCTGAAACTGGAAAGTGAACGACCATTTATCAGTAGGTGAAACAGAACTGTGCTGGAACACAGCCAGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS TCA 90 bp | TTTAGAGGAATAAACACCCTTAGCCGTCAGCCAACATTTTACAAATaGAGGCCAGCAAGGGAAAGGAGCTCACTGAAGGCCCATGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: FRGINTLSRQPTFYK*RPARERSSLKAHAH Trigger: ATGAGCATGGGCCTTCAGTGAGCTCCTTTCCCTTGCTGGCCTTCATTTGTAAAATGTTGGCTGACGGCTAAGGGTGTTTATTCCTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000420395.1 ENST00000660269.1 ENST00000670632.1 |
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| CDS GCA 90 bp | TTACAAATGAAGGCCAGCAAGGGAAAGGAGCTCACTGAAGGCCCATaGTCATTAATGAGGAAGCAAAAACAACAGCACACAGCCTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: LQMKASKGKELTEGP*SLMRKQKQQHTASV Trigger: AACAGAGGCTGTGTGCTGTTGTTTTTGCTTCCTCATTAATGAGCATGGGCCTTCAGTGAGCTCCTTTCCCTTGCTGGCCTTCATTTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000420395.1 ENST00000660269.1 ENST00000670632.1 |
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| CDS TCA 90 bp | TCCGGACACTCCACAGATAATCAATCGCATGGATCCATATATTGGTaGCACCATACTAATTGGACAGCATGGTCGCAGCCACTCATAAAG | + |
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Preference number: 5 (lower is better) Translates to: SGHSTDNQSHGSIYW*HHTNWTAWSQPLIK Trigger: CTTTATGAGTGGCTGCGACCATGCTGTCCAATTAGTATGGTGTCACCAATATATGGATCCATGCGATTGATTATCTGTGGAGTGTCCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420395.1 |
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| CDS TCA 90 bp | GCCCAGGTTTTGGTTAATTTTCCTGTTCTCCATCGTAATATAATCTaGAGGGTCCTGGACCATCCGGACACTCCACAGATAATCAATCGC | + |
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Preference number: 5 (lower is better) Translates to: AQVLVNFPVLHRNII*RVLDHPDTPQIINR Trigger: GCGATTGATTATCTGTGGAGTGTCCGGATGGTCCAGGACCCTTCAGATTATATTACGATGGAGAACAGGAAAATTAACCAAAACCTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000420395.1 ENST00000660269.1 ENST00000670632.1 |
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| CDS TCA 90 bp | AGCCAACATTTTACAAATGAAGGCCAGCAAGGGAAAGGAGCTCACTaGAGGCCCATGCTCATTAATGAGGAAGCAAAAACAACAGCACAC | + |
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Preference number: 5 (lower is better) Translates to: SQHFTNEGQQGKGAH*RPMLINEEAKTTAH Trigger: GTGTGCTGTTGTTTTTGCTTCCTCATTAATGAGCATGGGCCTTCAGTGAGCTCCTTTCCCTTGCTGGCCTTCATTTGTAAAATGTTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000420395.1 ENST00000660269.1 ENST00000670632.1 |
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| CDS TCA 90 bp | TCCGGACACTCCACAGATAATCAATCGCATGGATCCATATATTGGTaGCACCATACTAATTGGACCTTAAAAGAGCCTGCTTCACACAGC | + |
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Preference number: 5 (lower is better) Translates to: SGHSTDNQSHGSIYW*HHTNWTLKEPASHS Trigger: GCTGTGTGAAGCAGGCTCTTTTAAGGTCCAATTAGTATGGTGTCACCAATATATGGATCCATGCGATTGATTATCTGTGGAGTGTCCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660269.1 |
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| CDS TCA 90 bp | AGCAATTCCACGGATGATCTAAGCCCATCCTGCGCTGGACACCTCTaGGAAAGTGAATTAGCATTAGGATTATTGCAGAGAGATAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: SNSTDDLSPSCAGHL*ESELALGLLQRDKN Trigger: ATTCTTATCTCTCTGCAATAATCCTAATGCTAATTCACTTTCTCAGAGGTGTCCAGCGCAGGATGGGCTTAGATCATCCGTGGAATTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS TCA 90 bp | TTAAAAGAGCCTGCTTCACACAGCATTAAAGATCTGTTTCACACCTaGTGCATTACTCTTGCAATAGGCAGGGCTGTCTATGCTATCCTT | + |
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Preference number: 5 (lower is better) Translates to: LKEPASHSIKDLFHT*CITLAIGRAVYAIL Trigger: AAGGATAGCATAGACAGCCCTGCCTATTGCAAGAGTAATGCATCAGGTGTGAAACAGATCTTTAATGCTGTGTGAAGCAGGCTCTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660269.1 |
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| CDS TCA 90 bp | CTTGGACTTTCTTACAGCTTCTTGCTAAAGTTCAGGAGTTCTAAATaGTTACCCCAGAGAACCCATCAGATAACTATGTCTCCAACTAAA | + |
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Preference number: 5 (lower is better) Translates to: LGLSYSFLLKFRSSK*LPQRTHQITMSPTK Trigger: TTTAGTTGGAGACATAGTTATCTGATGGGTTCTCTGGGGTAATCATTTAGAACTCCTGAACTTTAGCAAGAAGCTGTAAGAAAGTCCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CAA 90 bp | GGTGGGGCTGTGGACAGACTCAGCAGAGCATTTATTGCGGCGGCTTaGCAGCAGCCGTTTCTAAGGAGATGGTGCCTGAGCCCCATGCAG | + |
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Preference number: 6 (lower is better) Translates to: GGAVDRLSRAFIAAA*QQPFLRRWCLSPMQ Trigger: CTGCATGGGGCTCAGGCACCATCTCCTTAGAAACGGCTGCTGCAAAGCCGCCGCAATAAATGCTCTGCTGAGTCTGTCCACAGCCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CAA 90 bp | TGCAGAGCGCCGTGCATCAGACGATCGATGCGTATTCGCAGCAAATaGGCCATTCAGCAGTGCCGTGCAGGAACCTCGGAGGCACAGATA | + |
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Preference number: 6 (lower is better) Translates to: CRAPCIRRSMRIRSK*AIQQCRAGTSEAQI Trigger: TATCTGTGCCTCCGAGGTTCCTGCACGGCACTGCTGAATGGCCAATTTGCTGCGAATACGCATCGATCGTCTGATGCACGGCGCTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS GCA 72 bp | GTCCTCAGTGCAGAGCGCCGTGCATCAGACGATCGATaGGTATTCGCAGCAAATTGGCCATTCAGCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: VLSAERRASDDR*VFAANWPFSSA Trigger: GGCACTGCTGAATGGCCAATTTGCTGCGAATACGCATCGATCGTCTGATGCACGGCGCTCTGCACTGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS GCA 72 bp | GGGTGGGGCTGTGGACAGACTCAGCAGAGCATTTATTaGGGCGGCTTTGCAGCAGCCGTTTCTAAGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: GWGCGQTQQSIY*GGFAAAVSKEM Trigger: CATCTCCTTAGAAACGGCTGCTGCAAAGCCGCCGCAATAAATGCTCTGCTGAGTCTGTCCACAGCCCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CCA 72 bp | CGTGCATCAGACGATCGATGCGTATTCGCAGCAAATTaGCCATTCAGCAGTGCCGTGCAGGAACCTCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RASDDRCVFAAN*PFSSAVQEPRR Trigger: CCTCCGAGGTTCCTGCACGGCACTGCTGAATGGCCAATTTGCTGCGAATACGCATCGATCGTCTGATGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CAA 72 bp | CCGTGCATCAGACGATCGATGCGTATTCGCAGCAAATaGGCCATTCAGCAGTGCCGTGCAGGAACCTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: PCIRRSMRIRSK*AIQQCRAGTSE Trigger: CTCCGAGGTTCCTGCACGGCACTGCTGAATGGCCAATTTGCTGCGAATACGCATCGATCGTCTGATGCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CAA 72 bp | TTCTGTGGCAGAGAAAGCTGCCAGAGTTTCCTGGCTTaGTCCCTTAGTGGCCTCTCTACCGGGTGGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: FCGRESCQSFLA*SLSGLSTGWGC Trigger: ACAGCCCCACCCGGTAGAGAGGCCACTAAGGGACAAAGCCAGGAAACTCTGGCAGCTTTCTCTGCCACAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CAA 90 bp | CAGTTCACTTTCTGTGGCAGAGAAAGCTGCCAGAGTTTCCTGGCTTaGTCCCTTAGTGGCCTCTCTACCGGGTGGGGCTGTGGACAGACT | + |
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Preference number: 6 (lower is better) Translates to: QFTFCGRESCQSFLA*SLSGLSTGWGCGQT Trigger: AGTCTGTCCACAGCCCCACCCGGTAGAGAGGCCACTAAGGGACAAAGCCAGGAAACTCTGGCAGCTTTCTCTGCCACAGAAAGTGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS GCA 72 bp | GCGTATTCGCAGCAAATTGGCCATTCAGCAGTGCCGTaGAGGAACCTCGGAGGCACAGATACGGAACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: AYSQQIGHSAVP*RNLGGTDTEQL Trigger: AAGCTGTTCCGTATCTGTGCCTCCGAGGTTCCTGCACGGCACTGCTGAATGGCCAATTTGCTGCGAATACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS GCA 72 bp | TCGATGCGTATTCGCAGCAAATTGGCCATTCAGCAGTaGCGTGCAGGAACCTCGGAGGCACAGATACGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SMRIRSKLAIQQ*RAGTSEAQIRN Trigger: GTTCCGTATCTGTGCCTCCGAGGTTCCTGCACGGCACTGCTGAATGGCCAATTTGCTGCGAATACGCATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CCA 72 bp | TTCCTGGCTTTGTCCCTTAGTGGCCTCTCTACCGGGTaGGGCTGTGGACAGACTCAGCAGAGCATTTATTGC | + |
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Preference number: 6 (lower is better) Translates to: FLALSLSGLSTG*GCGQTQQSIYC Trigger: GCAATAAATGCTCTGCTGAGTCTGTCCACAGCCCCACCCGGTAGAGAGGCCACTAAGGGACAAAGCCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CAA 72 bp | GTGGACAGACTCAGCAGAGCATTTATTGCGGCGGCTTaGCAGCAGCCGTTTCTAAGGAGATGGTGCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: VDRLSRAFIAAA*QQPFLRRWCLS Trigger: GCTCAGGCACCATCTCCTTAGAAACGGCTGCTGCAAAGCCGCCGCAATAAATGCTCTGCTGAGTCTGTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS GCA 72 bp | GGAATGAACCACGGTTCATCTTCACGGTGTCCTCAGTaGAGAGCGCCGTGCATCAGACGATCGATGCGTATT | + |
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Preference number: 6 (lower is better) Translates to: GMNHGSSSRCPQ*RAPCIRRSMRI Trigger: AATACGCATCGATCGTCTGATGCACGGCGCTCTGCACTGAGGACACCGTGAAGATGAACCGTGGTTCATTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS CCA 72 bp | TGTCTCAGAGTCCTAGTTCCACTCCTCAGCAGTTCCTaGTGTACCTTCCAGATACTGTCCACAGCAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: CLRVLVPLLSSS*CTFQILSTAEE Trigger: CTCCTCTGCTGTGGACAGTATCTGGAAGGTACACCAGGAACTGCTGAGGAGTGGAACTAGGACTCTGAGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660269.1 |
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| CDS CCA 72 bp | TACAGCATCAGCATGGTCGCAGCCACTCATAAAGCCTaGATCAGTCTCTTCAAATCCTACATGGGCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: YSISMVAATHKA*ISLFKSYMGFS Trigger: GCTGAAGCCCATGTAGGATTTGAAGAGACTGATCCAGGCTTTATGAGTGGCTGCGACCATGCTGATGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670632.1 |
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| CDS TCA 72 bp | TGCTTCATTTGGGGAGTTTTTAGGAATCCAGTCGTCTaGGACATGATACAGCATCAGCATGGTCGCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: CFIWGVFRNPVV*DMIQHQHGRSH Trigger: GTGGCTGCGACCATGCTGATGCTGTATCATGTCTCAGACGACTGGATTCCTAAAAACTCCCCAAATGAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670632.1 |
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| CDS TCA 72 bp | ACGGATGATCTAAGCCCATCCTGCGCTGGACACCTCTaGGAAAGTGAATTAGCATTAGGATTATTGCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TDDLSPSCAGHL*ESELALGLLQR Trigger: TCTCTGCAATAATCCTAATGCTAATTCACTTTCTCAGAGGTGTCCAGCGCAGGATGGGCTTAGATCATCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS TCA 72 bp | TTTGGGGAGTTTTTAGGAATCCAGTCGTCTGAGACATaGTACAGCATCAGCATGGTCGCAGCCACTCATAAA | + |
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Preference number: 6 (lower is better) Translates to: FGEFLGIQSSET*YSISMVAATHK Trigger: TTTATGAGTGGCTGCGACCATGCTGATGCTGTATCATGTCTCAGACGACTGGATTCCTAAAAACTCCCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670632.1 |
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| CDS TCA 72 bp | TCCACAGATAATCAATCGCATGGATCCATATATTGGTaGCACCATACTAATTGGACAGCATGGTCGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: STDNQSHGSIYW*HHTNWTAWSQP Trigger: TGGCTGCGACCATGCTGTCCAATTAGTATGGTGTCACCAATATATGGATCCATGCGATTGATTATCTGTGGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420395.1 |
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| CDS TCA 72 bp | CCTGCTTCACACAGCATTAAAGATCTGTTTCACACCTaGTGCATTACTCTTGCAATAGGCAGGGCTGTCTAT | + |
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Preference number: 6 (lower is better) Translates to: PASHSIKDLFHT*CITLAIGRAVY Trigger: ATAGACAGCCCTGCCTATTGCAAGAGTAATGCATCAGGTGTGAAACAGATCTTTAATGCTGTGTGAAGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660269.1 |
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| CDS CCA 72 bp | GTGTTCCAGCACAGTTCTGTTTCACCTACTGATAAATaGTCGTTCACTTTCCAGTTTCAGAACTCAGCTAAC | + |
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Preference number: 6 (lower is better) Translates to: VFQHSSVSPTDK*SFTFQFQNSAN Trigger: GTTAGCTGAGTTCTGAAACTGGAAAGTGAACGACCATTTATCAGTAGGTGAAACAGAACTGTGCTGGAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS TCA 72 bp | TCCACAGATAATCAATCGCATGGATCCATATATTGGTaGCACCATACTAATTGGACCTGCTTCATTTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: STDNQSHGSIYW*HHTNWTCFIWG Trigger: TCCCCAAATGAAGCAGGTCCAATTAGTATGGTGTCACCAATATATGGATCCATGCGATTGATTATCTGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670632.1 |
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| CDS GCA 72 bp | CCCTATTTCTGTTCTAAGATGTATTTAAACCAGCTTTaGTGCTACCAGTTCACTTTCTGTGGCAGAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: PYFCSKMYLNQL*CYQFTFCGRES Trigger: GCTTTCTCTGCCACAGAAAGTGAACTGGTAGCAGCAAAGCTGGTTTAAATACATCTTAGAACAGAAATAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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| CDS TCA 72 bp | TCCACAGATAATCAATCGCATGGATCCATATATTGGTaGCACCATACTAATTGGACCTTAAAAGAGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: STDNQSHGSIYW*HHTNWTLKEPA Trigger: AGCAGGCTCTTTTAAGGTCCAATTAGTATGGTGTCACCAATATATGGATCCATGCGATTGATTATCTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660269.1 |
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| CDS TCA 72 bp | TCTTACAGCTTCTTGCTAAAGTTCAGGAGTTCTAAATaGTTACCCCAGAGAACCCATCAGATAACTATGTCT | + |
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Preference number: 6 (lower is better) Translates to: SYSFLLKFRSSK*LPQRTHQITMS Trigger: AGACATAGTTATCTGATGGGTTCTCTGGGGTAATCATTTAGAACTCCTGAACTTTAGCAAGAAGCTGTAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660269.1 ENST00000670632.1 |
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