Pregenerated sensors for LINC02640 (Homo sapiens)

Ensembl gene IDs: ENSG00000233590

Ensembl transcript IDs: ENST00000429634.1, ENST00000444086.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AATAGGAAGCAATTGAACATTAATGATCTCCAGCATGACAGATGTTaGACACAGACTTCTGCATGGAGCCACTCAGCTCTGTTACTTTGG	+
Preference number: 5 (lower is better) Translates to: NRKQLNINDLQHDRC*TQTSAWSHSALLLW Trigger: CCAAAGTAACAGAGCTGAGTGGCTCCATGCAGAAGTCTGTGTTCAACATCTGTCATGCTGGAGATCATTAATGTTCAATTGCTTCCTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429634.1 ENST00000444086.1
CDS TCA 90 bp	GACAATGAAATGAAGTTGAATGACATGAAGACAATAGGAAGCAATTaGACATTAATGATCTCCAGCATGACAGATGTTGAACACAGACTT	+
Preference number: 5 (lower is better) Translates to: DNEMKLNDMKTIGSN*TLMISSMTDVEHRL Trigger: AAGTCTGTGTTCAACATCTGTCATGCTGGAGATCATTAATGTTCAATTGCTTCCTATTGTCTTCATGTCATTCAACTTCATTTCATTGTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429634.1 ENST00000444086.1
CDS CAA 72 bp	AGCCACTCAGCTCTGTTACTTTGGGTCATAACAGTCTaGGTTGGGAACAGCAGTCCTGTAGGGAACGGGAGC	+
Preference number: 6 (lower is better) Translates to: SHSALLLWVITV*VGNSSPVGNGS Trigger: GCTCCCGTTCCCTACAGGACTGCTGTTCCCAACCAAGACTGTTATGACCCAAAGTAACAGAGCTGAGTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429634.1
CDS CCA 72 bp	CAGACTTCTGCATGGAGCCACTCAGCTCTGTTACTTTaGGTCATAACAGTCTTGGTTGGGAACAGCAGTCCT	+
Preference number: 6 (lower is better) Translates to: QTSAWSHSALLL*VITVLVGNSSP Trigger: AGGACTGCTGTTCCCAACCAAGACTGTTATGACCCAAAGTAACAGAGCTGAGTGGCTCCATGCAGAAGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429634.1 ENST00000444086.1
CDS CAA 72 bp	AGCCACTCAGCTCTGTTACTTTGGGTCATAACAGTCTaGGTTGGGAACAGCAGTCCTGTTGCAGTTTTCCAG	+
Preference number: 6 (lower is better) Translates to: SHSALLLWVITV*VGNSSPVAVFQ Trigger: CTGGAAAACTGCAACAGGACTGCTGTTCCCAACCAAGACTGTTATGACCCAAAGTAACAGAGCTGAGTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444086.1
CDS CAA 90 bp	ATGTTGAACACAGACTTCTGCATGGAGCCACTCAGCTCTGTTACTTaGGGTCATAACAGTCTTGGTTGGGAACAGCAGTCCTGTAGGGAA	+
Preference number: 6 (lower is better) Translates to: MLNTDFCMEPLSSVT*GHNSLGWEQQSCRE Trigger: TTCCCTACAGGACTGCTGTTCCCAACCAAGACTGTTATGACCCAAAGTAACAGAGCTGAGTGGCTCCATGCAGAAGTCTGTGTTCAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429634.1
CDS CAA 90 bp	ATGTTGAACACAGACTTCTGCATGGAGCCACTCAGCTCTGTTACTTaGGGTCATAACAGTCTTGGTTGGGAACAGCAGTCCTGTTGCAGT	+
Preference number: 6 (lower is better) Translates to: MLNTDFCMEPLSSVT*GHNSLGWEQQSCCS Trigger: ACTGCAACAGGACTGCTGTTCCCAACCAAGACTGTTATGACCCAAAGTAACAGAGCTGAGTGGCTCCATGCAGAAGTCTGTGTTCAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444086.1
CDS CAA 72 bp	CTCTTGAGTGCTGGTACTTTATCTAGATCAGCTTTGTaGGTCCTCCAAAGTGTGTTTCCCAAATGTTGTCCT	+
Preference number: 6 (lower is better) Translates to: LLSAGTLSRSAL*VLQSVFPKCCP Trigger: AGGACAACATTTGGGAAACACACTTTGGAGGACCAACAAAGCTGATCTAGATAAAGTACCAGCACTCAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444086.1
CDS TCA 72 bp	ATGAAGTTGAATGACATGAAGACAATAGGAAGCAATTaGACATTAATGATCTCCAGCATGACAGATGTTGAA	+
Preference number: 6 (lower is better) Translates to: MKLNDMKTIGSN*TLMISSMTDVE Trigger: TTCAACATCTGTCATGCTGGAGATCATTAATGTTCAATTGCTTCCTATTGTCTTCATGTCATTCAACTTCAT 35% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429634.1 ENST00000444086.1

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