Pregenerated sensors for LINC02636 (Homo sapiens)
Ensembl gene IDs: ENSG00000224222Ensembl transcript IDs: ENST00000427247.1, ENST00000653732.1, ENST00000655496.1, ENST00000659203.1, ENST00000667615.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCAAAGACCTGGCTTGGAGAACATGCAGGGAGGAGGGCCGGGATGTaGCCATGCAGAGTCCCCTTGGTGTCACCATGGGCGCGTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKTWLGEHAGRRAGM*PCRVPLVSPWARHS Trigger: GCTGTGACGCGCCCATGGTGACACCAAGGGGACTCTGCATGGGCACATCCCGGCCCTCCTCCCTGCATGTTCTCCAAGCCAGGTCTTTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS CCA 90 bp | AGGAGGGCCGGGATGTGCCCATGCAGAGTCCCCTTGGTGTCACCATaGGCGCGTCACAGCCAGTCAGGCTCTGGATTCTACACCGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRAGMCPCRVPLVSP*ARHSQSGSGFYTVC Trigger: ACACACGGTGTAGAATCCAGAGCCTGACTGGCTGTGACGCGCCCATGGTGACACCAAGGGGACTCTGCATGGGCACATCCCGGCCCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653732.1 ENST00000655496.1 |
||
| CDS GCA 90 bp | GCAGGGAGGCTTGTAGCCTGGGACAAGTTCTCAGCCCTGCTCGCCTaGTGCCTGGAAATAAACTTGATGCTGTTGGGGGAGCATGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGRLVAWDKFSALLA*CLEINLMLLGEHAD Trigger: GTCAGCATGCTCCCCCAACAGCATCAAGTTTATTTCCAGGCAGCAGGCGAGCAGGGCTGAGAACTTGTCCCAGGCTACAAGCCTCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655496.1 ENST00000659203.1 ENST00000667615.1 |
||
| CDS TCA 90 bp | TCCTTCATCCAGACCCTTTACAGACAGCAGCAGCAGGGTCCAAGGTaGGGGTGGGTTGCAGGGCTGACTGTAGTTCCAAAGCAAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SFIQTLYRQQQQGPR*GWVAGLTVVPKQAG Trigger: CCCAGCTTGCTTTGGAACTACAGTCAGCCCTGCAACCCACCCTCACCTTGGACCCTGCTGCTGCTGTCTGTAAAGGGTCTGGATGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS GCA 90 bp | GGGAGGCTTGTAGCCTGGGACAAGTTCTCAGCCCTGCTCGCCTGCTaGCTGGAAATAAACTTGATGCTGTTGGGGGAGCATGCTGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GRLVAWDKFSALLAC*LEINLMLLGEHADS Trigger: ACTGTCAGCATGCTCCCCCAACAGCATCAAGTTTATTTCCAGGCAGCAGGCGAGCAGGGCTGAGAACTTGTCCCAGGCTACAAGCCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655496.1 ENST00000659203.1 ENST00000667615.1 |
||
| CDS TCA 90 bp | TCATCGCAGCATTGTCTTTACAGACAGCAGCAGCAGGGTCCAAGGTaGGGGTGGGTTGCAGGGCTGACTGTAGTTCCAAAGCAAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQHCLYRQQQQGPR*GWVAGLTVVPKQAG Trigger: CCCAGCTTGCTTTGGAACTACAGTCAGCCCTGCAACCCACCCTCACCTTGGACCCTGCTGCTGCTGTCTGTAAAGACAATGCTGCGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427247.1 ENST00000667615.1 |
||
| CDS CCA 90 bp | CCAGATTCTGTCATTCCCATCACTGGAGGTTTCAAAGACCTGGCTTaGAGAACATGCAGGGAGGAGGGCCGGGATGTGCCCATGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PDSVIPITGGFKDLA*RTCREEGRDVPMQS Trigger: ACTCTGCATGGGCACATCCCGGCCCTCCTCCCTGCATGTTCTCCAAGCCAGGTCTTTGAAACCTCCAGTGATGGGAATGACAGAATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000427247.1 ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS CCA 90 bp | TCATCCCAGATTCTGTCATTCCCATCACTGGAGGTTTCAAAGACCTaGCTTGGAGAACATGCAGGGAGGAGGGCCGGGATGTGCCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSQILSFPSLEVSKT*LGEHAGRRAGMCPC Trigger: GCATGGGCACATCCCGGCCCTCCTCCCTGCATGTTCTCCAAGCCAGGTCTTTGAAACCTCCAGTGATGGGAATGACAGAATCTGGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000427247.1 ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS CCA 90 bp | TCCATGTTGCAAAGGCTAAATTCTGGGCAAGTACAGCCGACAAGCTaGAGGCTCCCTTCCTTCATCCAGACCCTTTACAGACAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SMLQRLNSGQVQPTS*RLPSFIQTLYRQQQ Trigger: CTGCTGCTGTCTGTAAAGGGTCTGGATGAAGGAAGGGAGCCTCCAGCTTGTCGGCTGTACTTGCCCAGAATTTAGCCTTTGCAACATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS CCA 90 bp | TCTCTCTCACATAATAGATGGCCTCTGCACCACAAAACAGTCAGTTaGGCTGGTAGGGAAGCTTTGCCATTCTTACTATACGGCCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLSHNRWPLHHKTVS*AGREALPFLLYGLQ Trigger: TTGAAGGCCGTATAGTAAGAATGGCAAAGCTTCCCTACCAGCCCAACTGACTGTTTTGTGGTGCAGAGGCCATCTATTATGTGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667615.1 |
||
| CDS GCA 72 bp | GGAGAACATGCAGGGAGGAGGGCCGGGATGTGCCCATaGAGAGTCCCCTTGGTGTCACCATGGGCGCGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GEHAGRRAGMCP*RVPLVSPWARH Trigger: GTGACGCGCCCATGGTGACACCAAGGGGACTCTGCATGGGCACATCCCGGCCCTCCTCCCTGCATGTTCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS CCA 72 bp | GCCCTGCTTCTGTTGTCAGCAGGGAGGCTTGTAGCCTaGGACAAGTTCTCAGCCCTGCTCGCCTGCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALLLLSAGRLVA*DKFSALLACCL Trigger: CAGGCAGCAGGCGAGCAGGGCTGAGAACTTGTCCCAGGCTACAAGCCTCCCTGCTGACAACAGAAGCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 ENST00000667615.1 |
||
| CDS CAA 90 bp | CCCAGATTCTGTCATTCCCATCACTGGAGGTTTCAAAGACCTGGCTaGGAGAACATGCAGGGAGGAGGGCCGGGATGTGCCCATGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PRFCHSHHWRFQRPG*ENMQGGGPGCAHAE Trigger: CTCTGCATGGGCACATCCCGGCCCTCCTCCCTGCATGTTCTCCAAGCCAGGTCTTTGAAACCTCCAGTGATGGGAATGACAGAATCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000427247.1 ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS TCA 72 bp | CAGACCCTTTACAGACAGCAGCAGCAGGGTCCAAGGTaGGGGTGGGTTGCAGGGCTGACTGTAGTTCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QTLYRQQQQGPR*GWVAGLTVVPK Trigger: CTTTGGAACTACAGTCAGCCCTGCAACCCACCCTCACCTTGGACCCTGCTGCTGCTGTCTGTAAAGGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS CAA 72 bp | TGTCATTCCCATCACTGGAGGTTTCAAAGACCTGGCTaGGAGAACATGCAGGGAGGAGGGCCGGGATGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CHSHHWRFQRPG*ENMQGGGPGCA Trigger: GGCACATCCCGGCCCTCCTCCCTGCATGTTCTCCAAGCCAGGTCTTTGAAACCTCCAGTGATGGGAATGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000427247.1 ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS GCA 72 bp | GTAGCCTGGGACAAGTTCTCAGCCCTGCTCGCCTGCTaGCTGGAAATAAACTTGATGCTGTTGGGGGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VAWDKFSALLAC*LEINLMLLGEH Trigger: ATGCTCCCCCAACAGCATCAAGTTTATTTCCAGGCAGCAGGCGAGCAGGGCTGAGAACTTGTCCCAGGCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655496.1 ENST00000659203.1 ENST00000667615.1 |
||
| CDS GCA 72 bp | CTTGTAGCCTGGGACAAGTTCTCAGCCCTGCTCGCCTaGTGCCTGGAAATAAACTTGATGCTGTTGGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVAWDKFSALLA*CLEINLMLLGE Trigger: CTCCCCCAACAGCATCAAGTTTATTTCCAGGCAGCAGGCGAGCAGGGCTGAGAACTTGTCCCAGGCTACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655496.1 ENST00000659203.1 ENST00000667615.1 |
||
| CDS CAA 72 bp | CTGCTCGCCTGCTGCCTGGAAATAAACTTGATGCTGTaGGGGGAGCATGCTGACAGTGAGACCAGCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLACCLEINLML*GEHADSETSLS Trigger: GGAAAGGCTGGTCTCACTGTCAGCATGCTCCCCCAACAGCATCAAGTTTATTTCCAGGCAGCAGGCGAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655496.1 ENST00000659203.1 |
||
| CDS CAA 72 bp | TTCTCAGCCCTGCTCGCCTGCTGCCTGGAAATAAACTaGATGCTGTTGGGGGAGCATGCTGACAGTGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: FSALLACCLEIN*MLLGEHADSET Trigger: GGTCTCACTGTCAGCATGCTCCCCCAACAGCATCAAGTTTATTTCCAGGCAGCAGGCGAGCAGGGCTGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000655496.1 ENST00000659203.1 ENST00000667615.1 |
||
| CDS TCA 72 bp | CATTGTCTTTACAGACAGCAGCAGCAGGGTCCAAGGTaGGGGTGGGTTGCAGGGCTGACTGTAGTTCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HCLYRQQQQGPR*GWVAGLTVVPK Trigger: CTTTGGAACTACAGTCAGCCCTGCAACCCACCCTCACCTTGGACCCTGCTGCTGCTGTCTGTAAAGACAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000427247.1 ENST00000667615.1 |
||
| CDS CCA 72 bp | AATATAGGGGTAGAGAAAGCAGCAGCAAGAGCCCTGTaGGCACTCTCAGTCCTCAGGGAAGCCTTTTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: NIGVEKAAARAL*ALSVLREAFSV Trigger: GACAGAAAAGGCTTCCCTGAGGACTGAGAGTGCCCACAGGGCTCTTGCTGCTGCTTTCTCTACCCCTATATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 ENST00000667615.1 |
||
| CDS CCA 72 bp | CAAAGGCTAAATTCTGGGCAAGTACAGCCGACAAGCTaGAGGCTCCCTTCCTTCATCCAGACCCTTTACAGA | + |
|
Preference number: 6 (lower is better) Translates to: QRLNSGQVQPTS*RLPSFIQTLYR Trigger: TCTGTAAAGGGTCTGGATGAAGGAAGGGAGCCTCCAGCTTGTCGGCTGTACTTGCCCAGAATTTAGCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS CCA 72 bp | CCTCAGGGAAGCCTTTTCTGTCTTTATCTTGCAACTTaGGGAGGGCTGCCAGTGGAATTGAGGAAAAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PQGSLFCLYLAT*GGLPVELRKNQ Trigger: CTGGTTTTTCCTCAATTCCACTGGCAGCCCTCCCCAAGTTGCAAGATAAAGACAGAAAAGGCTTCCCTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 ENST00000667615.1 |
||
| CDS CAA 72 bp | AAAGGTTTTAACCTCCAGTCCCTTCTTGATGCCCACTaGATGGAATTCTCCAGCACCATCTGCCCTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KGFNLQSLLDAH*MEFSSTICPCS Trigger: TGAACAAGGGCAGATGGTGCTGGAGAATTCCATCAAGTGGGCATCAAGAAGGGACTGGAGGTTAAAACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653732.1 |
||
| CDS CCA 72 bp | CATAATAGATGGCCTCTGCACCACAAAACAGTCAGTTaGGCTGGTAGGGAAGCTTTGCCATTCTTACTATAC | + |
|
Preference number: 6 (lower is better) Translates to: HNRWPLHHKTVS*AGREALPFLLY Trigger: GTATAGTAAGAATGGCAAAGCTTCCCTACCAGCCCAACTGACTGTTTTGTGGTGCAGAGGCCATCTATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667615.1 |
||
| CDS CAA 72 bp | CGTCTTAAGTCTACAGAGCTGCCTCTAGCAAAAGGTTaGTGTGAGTCCGTGTATGCTGAGCTTTTTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RLKSTELPLAKG*CESVYAELFVV Trigger: AACAACAAAAAGCTCAGCATACACGGACTCACACAAACCTTTTGCTAGAGGCAGCTCTGTAGACTTAAGACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000427247.1 ENST00000653732.1 ENST00000655496.1 ENST00000659203.1 |
||
| CDS CCA 72 bp | TTTGCCATTCTTACTATACGGCCTTCAACAATGCTCTaGTCAGCACTTTTCCAGCTGCACATAGGAATTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FAILTIRPSTML*SALFQLHIGIL Trigger: AAGAATTCCTATGTGCAGCTGGAAAAGTGCTGACCAGAGCATTGTTGAAGGCCGTATAGTAAGAATGGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667615.1 |
||
| CDS CCA 72 bp | AACTTCTTGTTGTCATTCATTACTACCTTAAAGAACTaGAGGAATCATCTCCTAGGAAACAGTGCCATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NFLLSFITTLKN*RNHLLGNSAMF Trigger: AAACATGGCACTGTTTCCTAGGAGATGATTCCTCCAGTTCTTTAAGGTAGTAATGAATGACAACAAGAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653732.1 |
||