Pregenerated sensors for LINC02635 (Homo sapiens)
Ensembl gene IDs: ENSG00000283000Ensembl transcript IDs: ENST00000634331.1, ENST00000635301.2, ENST00000654061.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCAAGGGTTGTCCGGGCTTGGTCTTGCCTCCCAGGTTTCAGGCGCTaGAGGTTTTACATGGCTGTGGTGGATCCAGGCTGGGATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARVVRAWSCLPGFRR*RFYMAVVDPGWDSF Trigger: GAAGGAATCCCAGCCTGGATCCACCACAGCCATGTAAAACCTGCAGCGCCTGAAACCTGGGAGGCAAGACCAAGCCCGGACAACCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS GCA 90 bp | CTTTGGCATCTCTGTGGAATCTACCTGGAGATCTTCAAAGGGGGCTaGTCCATAAGCCTGTATGCCGGGTGGAATGGCTGGACCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LWHLCGIYLEIFKGG*SISLYAGWNGWTLP Trigger: AGGCAAGGTCCAGCCATTCCACCCGGCATACAGGCTTATGGAGCAGCCCCCTTTGAAGATCTCCAGGTAGATTCCACAGAGATGCCAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635301.2 |
||
| CDS GCA 90 bp | GTTCTACTGGGTTGTAGCACACTTGAGTCTGGTCACTTCCTGAGCTaGATACCTTGTACTGGGTGGCATTATACACACAAGTCCCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VLLGCSTLESGHFLS*IPCTGWHYTHKSLL Trigger: TAAAAGGGACTTGTGTGTATAATGCCACCCAGTACAAGGTATGCAGCTCAGGAAGTGACCAGACTCAAGTGTGCTACAACCCAGTAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS TCA 90 bp | CACCATGGGCACAAAGAAGCTACATTCCAGTCTTTAATCCATACTTaGTCACCTTTGCTGTCTTCTGTATCAAGTCAGCCACAAATGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HHGHKEATFQSLIHT*SPLLSSVSSQPQMP Trigger: CGGCATTTGTGGCTGACTTGATACAGAAGACAGCAAAGGTGATCAAGTATGGATTAAAGACTGGAATGTAGCTTCTTTGTGCCCATGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635301.2 |
||
| CDS GCA 90 bp | CAAAGAAGCTACATTCCAGTCTTTAATCCATACTTGATCACCTTGTaGCACACCTTAGAAACAAGGGACCTGTCCAGGCTTCCTTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QRSYIPVFNPYLITL*HTLETRDLSRLPSD Trigger: ATCAGAAGGAAGCCTGGACAGGTCCCTTGTTTCTAAGGTGTGGCACAAGGTGATCAAGTATGGATTAAAGACTGGAATGTAGCTTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654061.1 |
||
| CDS CCA 90 bp | ACACTTGAGTCTGGTCACTTCCTGAGCTGCATACCTTGTACTGGGTaGCATTATACACACAAGTCCCTTTTAAACAGAAAGACTGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TLESGHFLSCIPCTG*HYTHKSLLNRKTVL Trigger: TAAAACAGTCTTTCTGTTTAAAAGGGACTTGTGTGTATAATGCCACCCAGTACAAGGTATGCAGCTCAGGAAGTGACCAGACTCAAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS GCA 72 bp | GTCCGGGCTTGGTCTTGCCTCCCAGGTTTCAGGCGCTaGAGGTTTTACATGGCTGTGGTGGATCCAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VRAWSCLPGFRR*RFYMAVVDPGW Trigger: CCAGCCTGGATCCACCACAGCCATGTAAAACCTGCAGCGCCTGAAACCTGGGAGGCAAGACCAAGCCCGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CAA 90 bp | ACTGGAGCAGGGCTTGTCATCATCTTCAAGGTCACTCTGCAAGGGTaGTCCGGGCTTGGTCTTGCCTCCCAGGTTTCAGGCGCTGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGAGLVIIFKVTLQG*SGLGLASQVSGAAG Trigger: ACCTGCAGCGCCTGAAACCTGGGAGGCAAGACCAAGCCCGGACAACCCTTGCAGAGTGACCTTGAAGATGATGACAAGCCCTGCTCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS GCA 72 bp | CTGGAGCAGGGCTTGTCATCATCTTCAAGGTCACTCTaGAAGGGTTGTCCGGGCTTGGTCTTGCCTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LEQGLSSSSRSL*KGCPGLVLPPR Trigger: CCTGGGAGGCAAGACCAAGCCCGGACAACCCTTGCAGAGTGACCTTGAAGATGATGACAAGCCCTGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CCA 72 bp | CTTGCCTCCCAGGTTTCAGGCGCTGCAGGTTTTACATaGCTGTGGTGGATCCAGGCTGGGATTCCTTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: LASQVSGAAGFT*LWWIQAGIPST Trigger: GGTAGAAGGAATCCCAGCCTGGATCCACCACAGCCATGTAAAACCTGCAGCGCCTGAAACCTGGGAGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CCA 72 bp | CATCTTCAAGGTCACTCTGCAAGGGTTGTCCGGGCTTaGTCTTGCCTCCCAGGTTTCAGGCGCTGCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: HLQGHSARVVRA*SCLPGFRRCRF Trigger: AAACCTGCAGCGCCTGAAACCTGGGAGGCAAGACCAAGCCCGGACAACCCTTGCAGAGTGACCTTGAAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CAA 72 bp | TCATCTTCAAGGTCACTCTGCAAGGGTTGTCCGGGCTaGGTCTTGCCTCCCAGGTTTCAGGCGCTGCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSRSLCKGCPG*VLPPRFQALQV Trigger: AACCTGCAGCGCCTGAAACCTGGGAGGCAAGACCAAGCCCGGACAACCCTTGCAGAGTGACCTTGAAGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CAA 72 bp | GGGCTTGTCATCATCTTCAAGGTCACTCTGCAAGGGTaGTCCGGGCTTGGTCTTGCCTCCCAGGTTTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLVIIFKVTLQG*SGLGLASQVSG Trigger: GCCTGAAACCTGGGAGGCAAGACCAAGCCCGGACAACCCTTGCAGAGTGACCTTGAAGATGATGACAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CAA 90 bp | GGCTTGTCATCATCTTCAAGGTCACTCTGCAAGGGTTGTCCGGGCTaGGTCTTGCCTCCCAGGTTTCAGGCGCTGCAGGTTTTACATGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLSSSSRSLCKGCPG*VLPPRFQALQVLHG Trigger: GCCATGTAAAACCTGCAGCGCCTGAAACCTGGGAGGCAAGACCAAGCCCGGACAACCCTTGCAGAGTGACCTTGAAGATGATGACAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS GCA 72 bp | CTCTGTGGAATCTACCTGGAGATCTTCAAAGGGGGCTaGTCCATAAGCCTGTATGCCGGGTGGAATGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCGIYLEIFKGG*SISLYAGWNGW Trigger: CCAGCCATTCCACCCGGCATACAGGCTTATGGAGCAGCCCCCTTTGAAGATCTCCAGGTAGATTCCACAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000635301.2 |
||
| CDS CAA 72 bp | TCAAGGTCACTCTGCAAGGGTTGTCCGGGCTTGGTCTaGCCTCCCAGGTTTCAGGCGCTGCAGGTTTTACAT | + |
|
Preference number: 6 (lower is better) Translates to: SRSLCKGCPGLV*PPRFQALQVLH Trigger: ATGTAAAACCTGCAGCGCCTGAAACCTGGGAGGCAAGACCAAGCCCGGACAACCCTTGCAGAGTGACCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CAA 90 bp | TCATCATCTTCAAGGTCACTCTGCAAGGGTTGTCCGGGCTTGGTCTaGCCTCCCAGGTTTCAGGCGCTGCAGGTTTTACATGGCTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSRSLCKGCPGLV*PPRFQALQVLHGCG Trigger: ACCACAGCCATGTAAAACCTGCAGCGCCTGAAACCTGGGAGGCAAGACCAAGCCCGGACAACCCTTGCAGAGTGACCTTGAAGATGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS TCA 72 bp | TACTGGGTTGTAGCACACTTGAGTCTGGTCACTTCCTaGGCTGCATACCTTGTACTGGGTGGCATTATACAC | + |
|
Preference number: 6 (lower is better) Translates to: YWVVAHLSLVTS*AAYLVLGGIIH Trigger: GTGTATAATGCCACCCAGTACAAGGTATGCAGCTCAGGAAGTGACCAGACTCAAGTGTGCTACAACCCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS GCA 72 bp | GGTTGTAGCACACTTGAGTCTGGTCACTTCCTGAGCTaGATACCTTGTACTGGGTGGCATTATACACACAAG | + |
|
Preference number: 6 (lower is better) Translates to: GCSTLESGHFLS*IPCTGWHYTHK Trigger: CTTGTGTGTATAATGCCACCCAGTACAAGGTATGCAGCTCAGGAAGTGACCAGACTCAAGTGTGCTACAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CCA 72 bp | AGTGGTCAGGATGACAATCTGGGGTCCTATCCACCATaGGCACAAAGAAGCTACATTCCAGTCTTTAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGQDDNLGSYPP*AQRSYIPVFNP Trigger: TGGATTAAAGACTGGAATGTAGCTTCTTTGTGCCCATGGTGGATAGGACCCCAGATTGTCATCCTGACCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CAA 90 bp | CCACCATGGGCACAAAGAAGCTACATTCCAGTCTTTAATCCATACTaGATCACCTTAGAAACAAGGGACCTGTCCAGGCTTCCTTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPWAQRSYIPVFNPY*ITLETRDLSRLPSD Trigger: ATCAGAAGGAAGCCTGGACAGGTCCCTTGTTTCTAAGGTGATCAAGTATGGATTAAAGACTGGAATGTAGCTTCTTTGTGCCCATGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634331.1 |
||
| CDS CAA 90 bp | GCACAAAGAAGCTACATTCCAGTCTTTAATCCATACTTGATCACCTaGTGCCACACCTTAGAAACAAGGGACCTGTCCAGGCTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AQRSYIPVFNPYLIT*CHTLETRDLSRLPS Trigger: AGAAGGAAGCCTGGACAGGTCCCTTGTTTCTAAGGTGTGGCACAAGGTGATCAAGTATGGATTAAAGACTGGAATGTAGCTTCTTTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654061.1 |
||
| CDS CAA 72 bp | AGCTACATTCCAGTCTTTAATCCATACTTGATCACCTaGTGCCACACCTTAGAAACAAGGGACCTGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SYIPVFNPYLIT*CHTLETRDLSR Trigger: CCTGGACAGGTCCCTTGTTTCTAAGGTGTGGCACAAGGTGATCAAGTATGGATTAAAGACTGGAATGTAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654061.1 |
||
| CDS CCA 72 bp | GGGCAGTCCAAATCTAGGAATAAGATCTCCACACTTTaGCATCTCTGTGGAATCTACCTGGAGATCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GQSKSRNKISTL*HLCGIYLEIFK Trigger: TTTGAAGATCTCCAGGTAGATTCCACAGAGATGCCAAAGTGTGGAGATCTTATTCCTAGATTTGGACTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635301.2 |
||
| CDS CAA 90 bp | CACTTCCACCTACATTACCTAGGTCTTCCTGCCAGTCCAATTCCATaGACTCCTAGAGTTACATACTCTCTTGTTTTCCAATGGGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: HFHLHYLGLPASPIP*TPRVTYSLVFQWGL Trigger: TAATCCCCATTGGAAAACAAGAGAGTATGTAACTCTAGGAGTCAATGGAATTGGACTGGCAGGAAGACCTAGGTAATGTAGGTGGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS CAA 72 bp | GCACAAAGAAGCTACATTCCAGTCTTTAATCCATACTaGATCACCTTAGAAACAAGGGACCTGTCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: AQRSYIPVFNPY*ITLETRDLSRL Trigger: AAGCCTGGACAGGTCCCTTGTTTCTAAGGTGATCAAGTATGGATTAAAGACTGGAATGTAGCTTCTTTGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634331.1 |
||
| CDS CAA 72 bp | CTACATTACCTAGGTCTTCCTGCCAGTCCAATTCCATaGACTCCTAGAGTTACATACTCTCTTGTTTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LHYLGLPASPIP*TPRVTYSLVFQ Trigger: TTGGAAAACAAGAGAGTATGTAACTCTAGGAGTCAATGGAATTGGACTGGCAGGAAGACCTAGGTAATGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000634331.1 ENST00000635301.2 ENST00000654061.1 |
||
| CDS TCA 72 bp | CACAAAGAAGCTACATTCCAGTCTTTAATCCATACTTaGTCACCTTTGCTGTCTTCTGTATCAAGTCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HKEATFQSLIHT*SPLLSSVSSQP Trigger: TGGCTGACTTGATACAGAAGACAGCAAAGGTGATCAAGTATGGATTAAAGACTGGAATGTAGCTTCTTTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635301.2 |
||