Pregenerated sensors for LINC02633 (Homo sapiens)

Ensembl gene IDs: ENSG00000224265

Ensembl transcript IDs: ENST00000451438.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GAGGTTGAGAAGTCGCACAACAGGCTGTCTACAAGCTGGCAACTCTaGGATGCTGGTAGCATGGCCCAGTCCAAGTCCAGAGACACATCA	+
Preference number: 5 (lower is better) Translates to: EVEKSHNRLSTSWQL*DAGSMAQSKSRDTS Trigger: TGATGTGTCTCTGGACTTGGACTGGGCCATGCTACCAGCATCTCAGAGTTGCCAGCTTGTAGACAGCCTGTTGTGCGACTTCTCAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451438.1
CDS TCA 90 bp	CTGGTAGCATGGCCCAGTCCAAGTCCAGAGACACATCAGTCTCCTTaGAACACCCTCACAGACACATCCAGAAGTACTGTTTTGCCAGTT	+
Preference number: 5 (lower is better) Translates to: LVAWPSPSPETHQSP*NTLTDTSRSTVLPV Trigger: AACTGGCAAAACAGTACTTCTGGATGTGTCTGTGAGGGTGTTTCAAGGAGACTGATGTGTCTCTGGACTTGGACTGGGCCATGCTACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451438.1
CDS GCA 90 bp	TTGCACAGCATTGGCCAAGGGTCAATACCTTGTAATAAGCATGTGTaGATTGGTCAGGGTTCTACAGAGAGGCAGATCAATAGGAGCTAT	+
Preference number: 5 (lower is better) Translates to: LHSIGQGSIPCNKHV*IGQGSTERQINRSY Trigger: ATAGCTCCTATTGATCTGCCTCTCTGTAGAACCCTGACCAATGCACACATGCTTATTACAAGGTATTGACCCTTGGCCAATGCTGTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451438.1
CDS TCA 72 bp	AAGTCGCACAACAGGCTGTCTACAAGCTGGCAACTCTaGGATGCTGGTAGCATGGCCCAGTCCAAGTCCAGA	+
Preference number: 6 (lower is better) Translates to: KSHNRLSTSWQL*DAGSMAQSKSR Trigger: TCTGGACTTGGACTGGGCCATGCTACCAGCATCTCAGAGTTGCCAGCTTGTAGACAGCCTGTTGTGCGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451438.1
CDS CAA 90 bp	GCTGGTAGCATGGCCCAGTCCAAGTCCAGAGACACATCAGTCTCCTaGAAACACCCTCACAGACACATCCAGAAGTACTGTTTTGCCAGT	+
Preference number: 6 (lower is better) Translates to: AGSMAQSKSRDTSVS*KHPHRHIQKYCFAS Trigger: ACTGGCAAAACAGTACTTCTGGATGTGTCTGTGAGGGTGTTTCAAGGAGACTGATGTGTCTCTGGACTTGGACTGGGCCATGCTACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451438.1
CDS CAA 90 bp	ACAGCATTGGCCAAGGGTCAATACCTTGTAATAAGCATGTGTGCATaGGTCAGGGTTCTACAGAGAGGCAGATCAATAGGAGCTATCGAT	+
Preference number: 6 (lower is better) Translates to: TALAKGQYLVISMCA*VRVLQRGRSIGAID Trigger: ATCGATAGCTCCTATTGATCTGCCTCTCTGTAGAACCCTGACCAATGCACACATGCTTATTACAAGGTATTGACCCTTGGCCAATGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451438.1
CDS CAA 72 bp	GCCAAGGGTCAATACCTTGTAATAAGCATGTGTGCATaGGTCAGGGTTCTACAGAGAGGCAGATCAATAGGA	+
Preference number: 6 (lower is better) Translates to: AKGQYLVISMCA*VRVLQRGRSIG Trigger: TCCTATTGATCTGCCTCTCTGTAGAACCCTGACCAATGCACACATGCTTATTACAAGGTATTGACCCTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451438.1
CDS GCA 72 bp	ATTGGCCAAGGGTCAATACCTTGTAATAAGCATGTGTaGATTGGTCAGGGTTCTACAGAGAGGCAGATCAAT	+
Preference number: 6 (lower is better) Translates to: IGQGSIPCNKHV*IGQGSTERQIN Trigger: ATTGATCTGCCTCTCTGTAGAACCCTGACCAATGCACACATGCTTATTACAAGGTATTGACCCTTGGCCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451438.1

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