Pregenerated sensors for LINC02631 (Homo sapiens)
Ensembl gene IDs: ENSG00000237772Ensembl transcript IDs: ENST00000453636.2, ENST00000661346.1, ENST00000663013.1, ENST00000664633.1, ENST00000665886.1, ENST00000669466.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCAGTAGGCAGGAAGGAATCGTCAGCACGCTGGCTGCCATGTGCTaGATCTCAAGGGACGCTCGTCTGAGGGGATTCCAGGTGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: ASRQEGIVSTLAAMC*ISRDARLRGFQVTG Trigger: CCCAGTCACCTGGAATCCCCTCAGACGAGCGTCCCTTGAGATCCAGCACATGGCAGCCAGCGTGCTGACGATTCCTTCCTGCCTACTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS GCA 90 bp | GGAGCCAGTAGGCAGGAAGGAATCGTCAGCACGCTGGCTGCCATGTaGTGGATCTCAAGGGACGCTCGTCTGAGGGGATTCCAGGTGACT | + |
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Preference number: 5 (lower is better) Translates to: GASRQEGIVSTLAAM*WISRDARLRGFQVT Trigger: AGTCACCTGGAATCCCCTCAGACGAGCGTCCCTTGAGATCCAGCACATGGCAGCCAGCGTGCTGACGATTCCTTCCTGCCTACTGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS TCA 90 bp | CAAGACACTTCGGCGAGGGCTGAGCACCATCATGTTGCTCCTGTGTaGATTCAGACAGAGCTGCAGCAGCCGCTGGGGCCAAACAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: QDTSARAEHHHVAPV*IQTELQQPLGPNKS Trigger: GCTCTTGTTTGGCCCCAGCGGCTGCTGCAGCTCTGTCTGAATTCACACAGGAGCAACATGATGGTGCTCAGCCCTCGCCGAAGTGTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS GCA 90 bp | CTGTCCTTCCTAGACCATGAGCAGCTGCTGGCCAGGGTTGCTGCCTaGCAAAAGGGTGGAGTTGGGAGAAACCAGGAGTCAACCACAGCT | + |
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Preference number: 5 (lower is better) Translates to: LSFLDHEQLLARVAA*QKGGVGRNQESTTA Trigger: AGCTGTGGTTGACTCCTGGTTTCTCCCAACTCCACCCTTTTGGCAGGCAGCAACCCTGGCCAGCAGCTGCTCATGGTCTAGGAAGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CCA 90 bp | ATCATGTTGCTCCTGTGTGAATTCAGACAGAGCTGCAGCAGCCGCTaGGGCCAAACAAGAGCCAAAAAGCCCCAGTGGGAGGCAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: IMLLLCEFRQSCSSR*GQTRAKKPQWEAKP Trigger: TGGCTTTGCCTCCCACTGGGGCTTTTTGGCTCTTGTTTGGCCCCAGCGGCTGCTGCAGCTCTGTCTGAATTCACACAGGAGCAACATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS GCA 90 bp | CTGCTGTGCCTCTTCCTTGGGGCAACATCTTCCCTAGCTCTAGATTaGTGGTCCAAGGGAATCAGGCCACTCAGTTGGCTTCGTCAATGG | + |
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Preference number: 5 (lower is better) Translates to: LLCLFLGATSSLALD*WSKGIRPLSWLRQW Trigger: CCATTGACGAAGCCAACTGAGTGGCCTGATTCCCTTGGACCAGCAATCTAGAGCTAGGGAAGATGTTGCCCCAAGGAAGAGGCACAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS TCA 90 bp | GTCCAAGCATCTCCCAACTCTTCAGCAAGACACTTCGGCGAGGGCTaGGCACCATCATGTTGCTCCTGTGTGAATTCAGACAGAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: VQASPNSSARHFGEG*APSCCSCVNSDRAA Trigger: TGCAGCTCTGTCTGAATTCACACAGGAGCAACATGATGGTGCTCAGCCCTCGCCGAAGTGTCTTGCTGAAGAGTTGGGAGATGCTTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS CCA 90 bp | CTGTGCCTCTTCCTTGGGGCAACATCTTCCCTAGCTCTAGATTGCTaGTCCAAGGGAATCAGGCCACTCAGTTGGCTTCGTCAATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: LCLFLGATSSLALDC*SKGIRPLSWLRQWK Trigger: TTTCCATTGACGAAGCCAACTGAGTGGCCTGATTCCCTTGGACCAGCAATCTAGAGCTAGGGAAGATGTTGCCCCAAGGAAGAGGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS TCA 90 bp | CTCTGGTTTGTGTTGACTGCCCTGTACTTCCAGCTGGCTTCTATCTaGATAGTCCAAGCATCTCCCAACTCTTCAGCAAGACACTTCGGC | + |
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Preference number: 5 (lower is better) Translates to: LWFVLTALYFQLASI*IVQASPNSSARHFG Trigger: GCCGAAGTGTCTTGCTGAAGAGTTGGGAGATGCTTGGACTATTCAGATAGAAGCCAGCTGGAAGTACAGGGCAGTCAACACAAACCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS GCA 90 bp | CAGGCCACTCAGTTGGCTTCGTCAATGGAAATTCTCAACACAGAATaGTCCTCTTCCACTGTGAGATGTTTCACCCTGAGACTGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: QATQLASSMEILNTE*SSSTVRCFTLRLMP Trigger: TGGCATCAGTCTCAGGGTGAAACATCTCACAGTGGAAGAGGAGCATTCTGTGTTGAGAATTTCCATTGACGAAGCCAACTGAGTGGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000453636.2 ENST00000663013.1 ENST00000664633.1 ENST00000669466.1 |
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| CDS GCA 90 bp | CCATGTCTCACTGGCCAAAAGTTTGCCTCTCTGGTTTGTGTTGACTaGCCTGTACTTCCAGCTGGCTTCTATCTGAATAGTCCAAGCATC | + |
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Preference number: 5 (lower is better) Translates to: PCLTGQKFASLVCVD*PVLPAGFYLNSPSI Trigger: GATGCTTGGACTATTCAGATAGAAGCCAGCTGGAAGTACAGGGCAGTCAACACAAACCAGAGAGGCAAACTTTTGGCCAGTGAGACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS GCA 90 bp | TGGTTTCTGGCATTCCTTGGTTTGTGGGAACCTAAATTCAGTCTCTaGCTCCATCTTCATTCACATGGCCTCTTCCCTGGGTCTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: WFLAFLGLWEPKFSL*LHLHSHGLFPGSLC Trigger: ACACAGAGACCCAGGGAAGAGGCCATGTGAATGAAGATGGAGGCAGAGACTGAATTTAGGTTCCCACAAACCAAGGAATGCCAGAAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664633.1 ENST00000665886.1 |
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| CDS TCA 90 bp | GAAACCAGGAGTCAACCACAGCTACCACAGTCTAATGAGTTAGTTTaGTACCAGGGACATATTAGGAGGACTTGCTGCTGCCACGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: ETRSQPQLPQSNELV*YQGHIRRTCCCHEL Trigger: AAGCTCGTGGCAGCAGCAAGTCCTCCTAATATGTCCCTGGTATCAAACTAACTCATTAGACTGTGGTAGCTGTGGTTGACTCCTGGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS TCA 90 bp | CCTAAGCTTCATGTACTAAACCTTCATGATAAATCATCACTCAGCTaGATAGTCCTTGGGAGGCATGGCGAAGACCTGGGTGGGTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: PKLHVLNLHDKSSLS*IVLGRHGEDLGGFS Trigger: ACTGAACCCACCCAGGTCTTCGCCATGCCTCCCAAGGACTATTCAGCTGAGTGATGATTTATCATGAAGGTTTAGTACATGAAGCTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664633.1 |
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| CDS CCA 90 bp | GTAAGGAAGAATCCTCCTTTTCCTCTTCCAGCTTTTGGTGGTTTCTaGCATTCCTTGGTTTGTGGGAACCTAAATTCAGTCTCTGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VRKNPPFPLPAFGGF*HSLVCGNLNSVSAS Trigger: GGAGGCAGAGACTGAATTTAGGTTCCCACAAACCAAGGAATGCCAGAAACCACCAAAAGCTGGAAGAGGAAAAGGAGGATTCTTCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CCA 90 bp | AAATTGCCCCAGAACATACTCCTAACAGATTTGCACTTGTTTTCATaGCTGGAAGTGAGTCATAGGGCCACACTTAGCTCAAGGGAGACT | + |
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Preference number: 5 (lower is better) Translates to: KLPQNILLTDLHLFS*LEVSHRATLSSRET Trigger: AGTCTCCCTTGAGCTAAGTGTGGCCCTATGACTCACTTCCAGCCATGAAAACAAGTGCAAATCTGTTAGGAGTATGTTCTGGGGCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS TCA 90 bp | CATCTAAGTGAATATAGAGGAGAGGGCATTTCTGATAGACACTCATaGGTCAGGCCCACAGGCTTAAAACACAGTGATACTTGTACTGGT | + |
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Preference number: 5 (lower is better) Translates to: HLSEYRGEGISDRHS*VRPTGLKHSDTCTG Trigger: ACCAGTACAAGTATCACTGTGTTTTAAGCCTGTGGGCCTGACTCATGAGTGTCTATCAGAAATGCCCTCTCCTCTATATTCACTTAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CCA 90 bp | TCTGAAGTCTGTAAGGAAGAATCCTCCTTTTCCTCTTCCAGCTTTTaGTGGTTTCTGGCATTCCTTGGTTTGTGGGAACCTAAATTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SEVCKEESSFSSSSF*WFLAFLGLWEPKFS Trigger: ACTGAATTTAGGTTCCCACAAACCAAGGAATGCCAGAAACCACCAAAAGCTGGAAGAGGAAAAGGAGGATTCTTCCTTACAGACTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS GCA 72 bp | AGGCAGGAAGGAATCGTCAGCACGCTGGCTGCCATGTaGTGGATCTCAAGGGACGCTCGTCTGAGGGGATTC | + |
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Preference number: 6 (lower is better) Translates to: RQEGIVSTLAAM*WISRDARLRGF Trigger: GAATCCCCTCAGACGAGCGTCCCTTGAGATCCAGCACATGGCAGCCAGCGTGCTGACGATTCCTTCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS CCA 72 bp | CAGGAAGGAATCGTCAGCACGCTGGCTGCCATGTGCTaGATCTCAAGGGACGCTCGTCTGAGGGGATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QEGIVSTLAAMC*ISRDARLRGFQ Trigger: CTGGAATCCCCTCAGACGAGCGTCCCTTGAGATCCAGCACATGGCAGCCAGCGTGCTGACGATTCCTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS CCA 72 bp | AAGGAGCCAGTAGGCAGGAAGGAATCGTCAGCACGCTaGCTGCCATGTGCTGGATCTCAAGGGACGCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: KEPVGRKESSAR*LPCAGSQGTLV Trigger: GACGAGCGTCCCTTGAGATCCAGCACATGGCAGCCAGCGTGCTGACGATTCCTTCCTGCCTACTGGCTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS CAA 90 bp | CAACTCTTCAGCAAGACACTTCGGCGAGGGCTGAGCACCATCATGTaGCTCCTGTGTGAATTCAGACAGAGCTGCAGCAGCCGCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: QLFSKTLRRGLSTIM*LLCEFRQSCSSRWG Trigger: GCCCCAGCGGCTGCTGCAGCTCTGTCTGAATTCACACAGGAGCAACATGATGGTGCTCAGCCCTCGCCGAAGTGTCTTGCTGAAGAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS GCA 72 bp | CTAGACCATGAGCAGCTGCTGGCCAGGGTTGCTGCCTaGCAAAAGGGTGGAGTTGGGAGAAACCAGGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LDHEQLLARVAA*QKGGVGRNQES Trigger: TGACTCCTGGTTTCTCCCAACTCCACCCTTTTGGCAGGCAGCAACCCTGGCCAGCAGCTGCTCATGGTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CCA 72 bp | CTCCTGTGTGAATTCAGACAGAGCTGCAGCAGCCGCTaGGGCCAAACAAGAGCCAAAAAGCCCCAGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LLCEFRQSCSSR*GQTRAKKPQWE Trigger: CTCCCACTGGGGCTTTTTGGCTCTTGTTTGGCCCCAGCGGCTGCTGCAGCTCTGTCTGAATTCACACAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS CAA 72 bp | AGCAAGACACTTCGGCGAGGGCTGAGCACCATCATGTaGCTCCTGTGTGAATTCAGACAGAGCTGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SKTLRRGLSTIM*LLCEFRQSCSS Trigger: GCTGCTGCAGCTCTGTCTGAATTCACACAGGAGCAACATGATGGTGCTCAGCCCTCGCCGAAGTGTCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS TCA 72 bp | CAGCCTGGTCACATTCTACTTATAGCCCACTCCATCTaGCAGCATAAAGCTAGACCTGCCCTGGGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QPGHILLIAHSI*QHKARPALGCW Trigger: CCAGCAGCCCAGGGCAGGTCTAGCTTTATGCTGTCAGATGGAGTGGGCTATAAGTAGAATGTGACCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CCA 72 bp | CAAGAGGAGAGCCAAGTGTCTGCTGTGCCTCTTCCTTaGGGCAACATCTTCCCTAGCTCTAGATTGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: QEESQVSAVPLP*GNIFPSSRLLV Trigger: GACCAGCAATCTAGAGCTAGGGAAGATGTTGCCCCAAGGAAGAGGCACAGCAGACACTTGGCTCTCCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CAA 72 bp | CCTCTTCCTTGGGGCAACATCTTCCCTAGCTCTAGATaGCTGGTCCAAGGGAATCAGGCCACTCAGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PLPWGNIFPSSR*LVQGNQATQLA Trigger: AGCCAACTGAGTGGCCTGATTCCCTTGGACCAGCAATCTAGAGCTAGGGAAGATGTTGCCCCAAGGAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CAA 90 bp | TCTGCTGTGCCTCTTCCTTGGGGCAACATCTTCCCTAGCTCTAGATaGCTGGTCCAAGGGAATCAGGCCACTCAGTTGGCTTCGTCAATG | + |
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Preference number: 6 (lower is better) Translates to: SAVPLPWGNIFPSSR*LVQGNQATQLASSM Trigger: CATTGACGAAGCCAACTGAGTGGCCTGATTCCCTTGGACCAGCAATCTAGAGCTAGGGAAGATGTTGCCCCAAGGAAGAGGCACAGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS TCA 72 bp | TCTCCCAACTCTTCAGCAAGACACTTCGGCGAGGGCTaGGCACCATCATGTTGCTCCTGTGTGAATTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SPNSSARHFGEG*APSCCSCVNSD Trigger: GTCTGAATTCACACAGGAGCAACATGATGGTGCTCAGCCCTCGCCGAAGTGTCTTGCTGAAGAGTTGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS GCA 72 bp | CTCTTCCTTGGGGCAACATCTTCCCTAGCTCTAGATTaGTGGTCCAAGGGAATCAGGCCACTCAGTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LFLGATSSLALD*WSKGIRPLSWL Trigger: AAGCCAACTGAGTGGCCTGATTCCCTTGGACCAGCAATCTAGAGCTAGGGAAGATGTTGCCCCAAGGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CCA 72 bp | TTCCTTGGGGCAACATCTTCCCTAGCTCTAGATTGCTaGTCCAAGGGAATCAGGCCACTCAGTTGGCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: FLGATSSLALDC*SKGIRPLSWLR Trigger: ACGAAGCCAACTGAGTGGCCTGATTCCCTTGGACCAGCAATCTAGAGCTAGGGAAGATGTTGCCCCAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CAA 90 bp | GGAGGCATGGCGAAGACCTGGGTGGGTTCAGTGGATCAACAGCCTTaGTCTTCATCAGGAGAGCAAAAATTGCCCCAGAACATACTCCTA | + |
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Preference number: 6 (lower is better) Translates to: GGMAKTWVGSVDQQP*SSSGEQKLPQNILL Trigger: TAGGAGTATGTTCTGGGGCAATTTTTGCTCTCCTGATGAAGACAAAGGCTGTTGATCCACTGAACCCACCCAGGTCTTCGCCATGCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664633.1 |
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| CDS CCA 72 bp | TCAGACTCCAGAACTGAAAACAAGCTGAGCATCTGGTaGAGCCATCCGCTGATCCAAAAGGCTGCTCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: SDSRTENKLSIW*SHPLIQKAALY Trigger: GTAGAGAGCAGCCTTTTGGATCAGCGGATGGCTCCACCAGATGCTCAGCTTGTTTTCAGTTCTGGAGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CAA 72 bp | GCGAAGACCTGGGTGGGTTCAGTGGATCAACAGCCTTaGTCTTCATCAGGAGAGCAAAAATTGCCCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: AKTWVGSVDQQP*SSSGEQKLPQN Trigger: GTTCTGGGGCAATTTTTGCTCTCCTGATGAAGACAAAGGCTGTTGATCCACTGAACCCACCCAGGTCTTCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664633.1 |
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| CDS TCA 72 bp | AGCCATCCGCTGATCCAAAAGGCTGCTCTCTACAGATaGATGGGTGTTAAGACAGCTGTCCTTCCTAGACCA | + |
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Preference number: 6 (lower is better) Translates to: SHPLIQKAALYR*MGVKTAVLPRP Trigger: TGGTCTAGGAAGGACAGCTGTCTTAACACCCATTCATCTGTAGAGAGCAGCCTTTTGGATCAGCGGATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS GCA 72 bp | GCATTCCTTGGTTTGTGGGAACCTAAATTCAGTCTCTaGCTCCATCTTCATTCACATGGCCTCTTCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AFLGLWEPKFSL*LHLHSHGLFPG Trigger: CCCAGGGAAGAGGCCATGTGAATGAAGATGGAGGCAGAGACTGAATTTAGGTTCCCACAAACCAAGGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664633.1 ENST00000665886.1 |
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| CDS CAA 72 bp | AGGGACATATTAGGAGGACTTGCTGCTGCCACGAGCTaGCACATGACTCTTCTCAACTGCAGAGGAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: RDILGGLAAATS*HMTLLNCRGKP Trigger: TGGTTTTCCTCTGCAGTTGAGAAGAGTCATGTGCAAGCTCGTGGCAGCAGCAAGTCCTCCTAATATGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000661346.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS TCA 72 bp | TCTCACTGGCCAAAAGTTTGCCTCTCTGGTTTGTGTTaGCTGCCCTGTACTTCCAGCTGGCTTCTATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SHWPKVCLSGLC*LPCTSSWLLSE Trigger: TTCAGATAGAAGCCAGCTGGAAGTACAGGGCAGTCAACACAAACCAGAGAGGCAAACTTTTGGCCAGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS TCA 72 bp | TCTTCCACTGTGAGATGTTTCACCACAAGCAGCTGCTaGCATCAGGGTCCTTATGAAAATGCTGCACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSTVRCFTTSSC*HQGPYENAAPE Trigger: CTCAGGTGCAGCATTTTCATAAGGACCCTGATGTCAGCAGCTGCTTGTGGTGAAACATCTCACAGTGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661346.1 ENST00000665886.1 |
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| CDS CCA 72 bp | GTGAGATGTTTCACCCTGAGACTGATGCCAGGTAGATaGCACTGGGGATTTCAGACTCCAGAACTGAAAACA | + |
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Preference number: 6 (lower is better) Translates to: VRCFTLRLMPGR*HWGFQTPELKT Trigger: TGTTTTCAGTTCTGGAGTCTGAAATCCCCAGTGCCATCTACCTGGCATCAGTCTCAGGGTGAAACATCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000453636.2 ENST00000663013.1 ENST00000664633.1 ENST00000669466.1 |
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| CDS CAA 72 bp | CATAGTGTCTGGGTGGGTTCAGTGGATCAACAGCCTTaGTCTTCATCAGGAGAGCAAAAATTGCCCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: HSVWVGSVDQQP*SSSGEQKLPQN Trigger: GTTCTGGGGCAATTTTTGCTCTCCTGATGAAGACAAAGGCTGTTGATCCACTGAACCCACCCAGACACTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS CAA 72 bp | GTGATTACCTGGGTGGGTTCAGTGGATCAACAGCCTTaGTCTTCATCAGGAGAGCAAAAATTGCCCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: VITWVGSVDQQP*SSSGEQKLPQN Trigger: GTTCTGGGGCAATTTTTGCTCTCCTGATGAAGACAAAGGCTGTTGATCCACTGAACCCACCCAGGTAATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000663013.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS GCA 72 bp | ACTGGCCAAAAGTTTGCCTCTCTGGTTTGTGTTGACTaGCCTGTACTTCCAGCTGGCTTCTATCTGAATAGT | + |
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Preference number: 6 (lower is better) Translates to: TGQKFASLVCVD*PVLPAGFYLNS Trigger: ACTATTCAGATAGAAGCCAGCTGGAAGTACAGGGCAGTCAACACAAACCAGAGAGGCAAACTTTTGGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS CCA 72 bp | CTAGATTGCTGGTCCAAGGGAATCAGGCCACTCAGTTaGCTTCGTCAATGGAAATTCTCAACACAGAATGCT | + |
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Preference number: 6 (lower is better) Translates to: LDCWSKGIRPLS*LRQWKFSTQNA Trigger: AGCATTCTGTGTTGAGAATTTCCATTGACGAAGCCAACTGAGTGGCCTGATTCCCTTGGACCAGCAATCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CAA 72 bp | TCTAGATTGCTGGTCCAAGGGAATCAGGCCACTCAGTaGGCTTCGTCAATGGAAATTCTCAACACAGAATGC | + |
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Preference number: 6 (lower is better) Translates to: SRLLVQGNQATQ*ASSMEILNTEC Trigger: GCATTCTGTGTTGAGAATTTCCATTGACGAAGCCAACTGAGTGGCCTGATTCCCTTGGACCAGCAATCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CAA 90 bp | AAGAAACCACATAGTGTCTGGGTGGGTTCAGTGGATCAACAGCCTTaGTCTTCATCAGGAGAGCAAAAATTGCCCCAGAACATACTCCTA | + |
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Preference number: 6 (lower is better) Translates to: KKPHSVWVGSVDQQP*SSSGEQKLPQNILL Trigger: TAGGAGTATGTTCTGGGGCAATTTTTGCTCTCCTGATGAAGACAAAGGCTGTTGATCCACTGAACCCACCCAGACACTATGTGGTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000453636.2 ENST00000661346.1 |
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| CDS TCA 72 bp | AGTCAACCACAGCTACCACAGTCTAATGAGTTAGTTTaGTACCAGGGACATATTAGGAGGACTTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SQPQLPQSNELV*YQGHIRRTCCC Trigger: GCAGCAGCAAGTCCTCCTAATATGTCCCTGGTATCAAACTAACTCATTAGACTGTGGTAGCTGTGGTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS TCA 72 bp | ACACTCATGAGTCAGGCCCACAGGCTTAAAACACAGTaGTACTTGTACTGGTTTCTTACAGCTGCTGTGACT | + |
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Preference number: 6 (lower is better) Translates to: TLMSQAHRLKTQ*YLYWFLTAAVT Trigger: AGTCACAGCAGCTGTAAGAAACCAGTACAAGTATCACTGTGTTTTAAGCCTGTGGGCCTGACTCATGAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS GCA 72 bp | CAGTTGGCTTCGTCAATGGAAATTCTCAACACAGAATaGTCCTCTTCCACTGTGAGATGTTTCACCACAAGC | + |
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Preference number: 6 (lower is better) Translates to: QLASSMEILNTE*SSSTVRCFTTS Trigger: GCTTGTGGTGAAACATCTCACAGTGGAAGAGGAGCATTCTGTGTTGAGAATTTCCATTGACGAAGCCAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661346.1 ENST00000665886.1 |
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| CDS TCA 72 bp | GAATATAGAGGAGAGGGCATTTCTGATAGACACTCATaGGTCAGGCCCACAGGCTTAAAACACAGTGATACT | + |
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Preference number: 6 (lower is better) Translates to: EYRGEGISDRHS*VRPTGLKHSDT Trigger: AGTATCACTGTGTTTTAAGCCTGTGGGCCTGACTCATGAGTGTCTATCAGAAATGCCCTCTCCTCTATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CCA 72 bp | AATCCTCCTTTTCCTCTTCCAGCTTTTGGTGGTTTCTaGCATTCCTTGGTTTGTGGGAACCTAAATTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: NPPFPLPAFGGF*HSLVCGNLNSV Trigger: GACTGAATTTAGGTTCCCACAAACCAAGGAATGCCAGAAACCACCAAAAGCTGGAAGAGGAAAAGGAGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CAA 72 bp | AAATTGCCCCAGAACATACTCCTAACAGATTTGCACTaGTTTTCATGGCTGGAAGTGAGTCATAGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: KLPQNILLTDLH*FSWLEVSHRAT Trigger: TGTGGCCCTATGACTCACTTCCAGCCATGAAAACAAGTGCAAATCTGTTAGGAGTATGTTCTGGGGCAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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| CDS CAA 72 bp | GATCAACAGCCTTTGTCTTCATCAGGAGAGCAAAAATaGCCCCAGAACATACTCCTAACAGATTTGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: DQQPLSSSGEQK*PQNILLTDLHL Trigger: CAAGTGCAAATCTGTTAGGAGTATGTTCTGGGGCAATTTTTGCTCTCCTGATGAAGACAAAGGCTGTTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000453636.2 ENST00000661346.1 ENST00000663013.1 ENST00000664633.1 ENST00000665886.1 ENST00000669466.1 |
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