Pregenerated sensors for LINC02630 (Homo sapiens)
Ensembl gene IDs: ENSG00000227313Ensembl transcript IDs: ENST00000442783.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTACACGCAGAGGACACACATCCTTGCCTCCTCTCCAAGACTAAGTaGGGACTAGTGGTTCTGGGCTGGGGTGATCAGAGCTTCCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: LHAEDTHPCLLSKTK*GLVVLGWGDQSFQG Trigger: TCCTTGGAAGCTCTGATCACCCCAGCCCAGAACCACTAGTCCCCACTTAGTCTTGGAGAGGAGGCAAGGATGTGTGTCCTCTGCGTGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 90 bp | AAGCATTTGCAGACCGTAAGGCTACACGCAGAGGACACACATCCTTaGCTCCTCTCCAAGACTAAGTGGGGACTAGTGGTTCTGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: KHLQTVRLHAEDTHP*LLSKTKWGLVVLGW Trigger: CCAGCCCAGAACCACTAGTCCCCACTTAGTCTTGGAGAGGAGGCAAGGATGTGTGTCCTCTGCGTGTAGCCTTACGGTCTGCAAATGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 90 bp | AGTCTCCCTCCGATAAGCAGCTGTCCCCTGGAGGCATCAGAAAGCTaGACAACAAAGCCGTCTGGCTCAGTTTTGCAGTGGTCTAACTTC | + |
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Preference number: 5 (lower is better) Translates to: SLPPISSCPLEASES*TTKPSGSVLQWSNF Trigger: GAAGTTAGACCACTGCAAAACTGAGCCAGACGGCTTTGTTGTGCAGCTTTCTGATGCCTCCAGGGGACAGCTGCTTATCGGAGGGAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CCA 90 bp | CCTTGCCTCCTCTCCAAGACTAAGTGGGGACTAGTGGTTCTGGGCTaGGGTGATCAGAGCTTCCAAGGAGAATCAAGCTTCCACATCTTC | + |
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Preference number: 5 (lower is better) Translates to: PCLLSKTKWGLVVLG*GDQSFQGESSFHIF Trigger: GAAGATGTGGAAGCTTGATTCTCCTTGGAAGCTCTGATCACCCCAGCCCAGAACCACTAGTCCCCACTTAGTCTTGGAGAGGAGGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CCA 90 bp | TGTCTTCCCACTCTAGCAGAGGAAGTCCATGTTGTGCAACCCCTGTaGCTCTCAAAGGTACTTGAGGCTGGATCTGAGAGCCAAGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: CLPTLAEEVHVVQPL*LSKVLEAGSESQVD Trigger: GTCCACTTGGCTCTCAGATCCAGCCTCAAGTACCTTTGAGAGCCACAGGGGTTGCACAACATGGACTTCCTCTGCTAGAGTGGGAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 90 bp | TGGAGGCATCAGAAAGCTGCACAACAAAGCCGTCTGGCTCAGTTTTaGAGTGGTCTAACTTCAGTGTGCGTGAGACATCTTCTCCCACTG | + |
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Preference number: 5 (lower is better) Translates to: WRHQKAAQQSRLAQF*SGLTSVCVRHLLPL Trigger: CAGTGGGAGAAGATGTCTCACGCACACTGAAGTTAGACCACTGCAAAACTGAGCCAGACGGCTTTGTTGTGCAGCTTTCTGATGCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 90 bp | AGCTTCCAAGGAGAATCAAGCTTCCACATCTTCACCCACACCAGCTaGAAAAGGGAGGGCTATCCAGTTAGCTGGTTGAAGCATCGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SFQGESSFHIFTHTS*KREGYPVSWLKHRS Trigger: AGAGCGATGCTTCAACCAGCTAACTGGATAGCCCTCCCTTTTGCAGCTGGTGTGGGTGAAGATGTGGAAGCTTGATTCTCCTTGGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CCA 90 bp | ATCTTCACCCACACCAGCTGCAAAAGGGAGGGCTATCCAGTTAGCTaGTTGAAGCATCGCTCTCATAAAGTAACTGCTTCCCCTTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: IFTHTSCKREGYPVS*LKHRSHKVTASPCR Trigger: CCTGCAAGGGGAAGCAGTTACTTTATGAGAGCGATGCTTCAACCAGCTAACTGGATAGCCCTCCCTTTTGCAGCTGGTGTGGGTGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 90 bp | CAACAAAGCCGTCTGGCTCAGTTTTGCAGTGGTCTAACTTCAGTGTaGGTGAGACATCTTCTCCCACTGTTTGTTTCTTCTCTCGCTCAC | + |
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Preference number: 5 (lower is better) Translates to: QQSRLAQFCSGLTSV*VRHLLPLFVSSLAH Trigger: GTGAGCGAGAGAAGAAACAAACAGTGGGAGAAGATGTCTCACGCACACTGAAGTTAGACCACTGCAAAACTGAGCCAGACGGCTTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CCA 90 bp | GCATCAGAAAGCTGCACAACAAAGCCGTCTGGCTCAGTTTTGCAGTaGTCTAACTTCAGTGTGCGTGAGACATCTTCTCCCACTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: ASESCTTKPSGSVLQ*SNFSVRETSSPTVC Trigger: ACAAACAGTGGGAGAAGATGTCTCACGCACACTGAAGTTAGACCACTGCAAAACTGAGCCAGACGGCTTTGTTGTGCAGCTTTCTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CCA 72 bp | GAGGACACACATCCTTGCCTCCTCTCCAAGACTAAGTaGGGACTAGTGGTTCTGGGCTGGGGTGATCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: EDTHPCLLSKTK*GLVVLGWGDQS Trigger: GCTCTGATCACCCCAGCCCAGAACCACTAGTCCCCACTTAGTCTTGGAGAGGAGGCAAGGATGTGTGTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 72 bp | CCGATAAGCAGCTGTCCCCTGGAGGCATCAGAAAGCTaGACAACAAAGCCGTCTGGCTCAGTTTTGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PISSCPLEASES*TTKPSGSVLQW Trigger: CCACTGCAAAACTGAGCCAGACGGCTTTGTTGTGCAGCTTTCTGATGCCTCCAGGGGACAGCTGCTTATCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 72 bp | CAGACCGTAAGGCTACACGCAGAGGACACACATCCTTaGCTCCTCTCCAAGACTAAGTGGGGACTAGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: QTVRLHAEDTHP*LLSKTKWGLVV Trigger: AACCACTAGTCCCCACTTAGTCTTGGAGAGGAGGCAAGGATGTGTGTCCTCTGCGTGTAGCCTTACGGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CCA 72 bp | CTCTCCAAGACTAAGTGGGGACTAGTGGTTCTGGGCTaGGGTGATCAGAGCTTCCAAGGAGAATCAAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSKTKWGLVVLG*GDQSFQGESSF Trigger: GAAGCTTGATTCTCCTTGGAAGCTCTGATCACCCCAGCCCAGAACCACTAGTCCCCACTTAGTCTTGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CCA 72 bp | ACTCTAGCAGAGGAAGTCCATGTTGTGCAACCCCTGTaGCTCTCAAAGGTACTTGAGGCTGGATCTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: TLAEEVHVVQPL*LSKVLEAGSES Trigger: GCTCTCAGATCCAGCCTCAAGTACCTTTGAGAGCCACAGGGGTTGCACAACATGGACTTCCTCTGCTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CAA 90 bp | CTGGAGGCATCAGAAAGCTGCACAACAAAGCCGTCTGGCTCAGTTTaGCAGTGGTCTAACTTCAGTGTGCGTGAGACATCTTCTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: LEASESCTTKPSGSV*QWSNFSVRETSSPT Trigger: AGTGGGAGAAGATGTCTCACGCACACTGAAGTTAGACCACTGCAAAACTGAGCCAGACGGCTTTGTTGTGCAGCTTTCTGATGCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CAA 90 bp | TTCACCCACACCAGCTGCAAAAGGGAGGGCTATCCAGTTAGCTGGTaGAAGCATCGCTCTCATAAAGTAACTGCTTCCCCTTGCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: FTHTSCKREGYPVSW*KHRSHKVTASPCRM Trigger: CATCCTGCAAGGGGAAGCAGTTACTTTATGAGAGCGATGCTTCAACCAGCTAACTGGATAGCCCTCCCTTTTGCAGCTGGTGTGGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 72 bp | TTGAAGCATCGCTCTCATAAAGTAACTGCTTCCCCTTaGAGGATGCTGCATGGAACATCTCCAGCCCCAACC | + |
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Preference number: 6 (lower is better) Translates to: LKHRSHKVTASP*RMLHGTSPAPT Trigger: GGTTGGGGCTGGAGATGTTCCATGCAGCATCCTGCAAGGGGAAGCAGTTACTTTATGAGAGCGATGCTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CCA 72 bp | AGCTGCACAACAAAGCCGTCTGGCTCAGTTTTGCAGTaGTCTAACTTCAGTGTGCGTGAGACATCTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SCTTKPSGSVLQ*SNFSVRETSSP Trigger: GGGAGAAGATGTCTCACGCACACTGAAGTTAGACCACTGCAAAACTGAGCCAGACGGCTTTGTTGTGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CAA 72 bp | TCCATGTTGTGCAACCCCTGTGGCTCTCAAAGGTACTaGAGGCTGGATCTGAGAGCCAAGTGGACTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: SMLCNPCGSQRY*RLDLRAKWTLI Trigger: AATGAGAGTCCACTTGGCTCTCAGATCCAGCCTCAAGTACCTTTGAGAGCCACAGGGGTTGCACAACATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CCA 72 bp | CACACCAGCTGCAAAAGGGAGGGCTATCCAGTTAGCTaGTTGAAGCATCGCTCTCATAAAGTAACTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HTSCKREGYPVS*LKHRSHKVTAS Trigger: GGAAGCAGTTACTTTATGAGAGCGATGCTTCAACCAGCTAACTGGATAGCCCTCCCTTTTGCAGCTGGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CAA 72 bp | ACCAGCTGCAAAAGGGAGGGCTATCCAGTTAGCTGGTaGAAGCATCGCTCTCATAAAGTAACTGCTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: TSCKREGYPVSW*KHRSHKVTASP Trigger: AGGGGAAGCAGTTACTTTATGAGAGCGATGCTTCAACCAGCTAACTGGATAGCCCTCCCTTTTGCAGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 72 bp | CAGAAAGCTGCACAACAAAGCCGTCTGGCTCAGTTTTaGAGTGGTCTAACTTCAGTGTGCGTGAGACATCTT | + |
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Preference number: 6 (lower is better) Translates to: QKAAQQSRLAQF*SGLTSVCVRHL Trigger: AAGATGTCTCACGCACACTGAAGTTAGACCACTGCAAAACTGAGCCAGACGGCTTTGTTGTGCAGCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CAA 72 bp | TCAGAAAGCTGCACAACAAAGCCGTCTGGCTCAGTTTaGCAGTGGTCTAACTTCAGTGTGCGTGAGACATCT | + |
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Preference number: 6 (lower is better) Translates to: SESCTTKPSGSV*QWSNFSVRETS Trigger: AGATGTCTCACGCACACTGAAGTTAGACCACTGCAAAACTGAGCCAGACGGCTTTGTTGTGCAGCTTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS GCA 72 bp | CGTCTGGCTCAGTTTTGCAGTGGTCTAACTTCAGTGTaGGTGAGACATCTTCTCCCACTGTTTGTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RLAQFCSGLTSV*VRHLLPLFVSS Trigger: AGAAGAAACAAACAGTGGGAGAAGATGTCTCACGCACACTGAAGTTAGACCACTGCAAAACTGAGCCAGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CAA 90 bp | GGAACTAAAATGAATAGTCTCTCTTTCATAGGTTTTCATAAGCATTaGCAGACCGTAAGGCTACACGCAGAGGACACACATCCTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GTKMNSLSFIGFHKH*QTVRLHAEDTHPCL Trigger: GAGGCAAGGATGTGTGTCCTCTGCGTGTAGCCTTACGGTCTGCAAATGCTTATGAAAACCTATGAAAGAGAGACTATTCATTTTAGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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| CDS CAA 72 bp | ATGAATAGTCTCTCTTTCATAGGTTTTCATAAGCATTaGCAGACCGTAAGGCTACACGCAGAGGACACACAT | + |
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Preference number: 6 (lower is better) Translates to: MNSLSFIGFHKH*QTVRLHAEDTH Trigger: ATGTGTGTCCTCTGCGTGTAGCCTTACGGTCTGCAAATGCTTATGAAAACCTATGAAAGAGAGACTATTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442783.1 |
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