RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02625 (Homo sapiens)

Ensembl gene IDs: ENSG00000233643

Ensembl transcript IDs: ENST00000441001.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CCTGATTTAATTGATTCATTGAATCATACTGCCTTTACTGACAACTaGTCCCAGCACCTTATACTTCAGCCCTTTTTGCTGAGACACACC +
Preference number: 5 (lower is better)
Translates to: PDLIDSLNHTAFTDN*SQHLILQPFLLRHT
Trigger: GGTGTGTCTCAGCAAAAAGGGCTGAAGTATAAGGTGCTGGGACCAGTTGTCAGTAAAGGCAGTATGATTCAATGAATCAATTAAATCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441001.2
CDS GCA 72 bp GGCTATGGAAGGACTTCACTAATTCCTTCGGATTCATaGCCTGCTTCCTCCCAGGAGGATGTTCAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: GYGRTSLIPSDS*PASSQEDVQVG
Trigger: CCCCACCTGAACATCCTCCTGGGAGGAAGCAGGGCATGAATCCGAAGGAATTAGTGAAGTCCTTCCATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441001.2
CDS GCA 72 bp TGGAAGGACTTCACTAATTCCTTCGGATTCATGCCCTaGTTCCTCCCAGGAGGATGTTCAGGTGGGGTAACC +
Preference number: 6 (lower is better)
Translates to: WKDFTNSFGFMP*FLPGGCSGGVT
Trigger: GGTTACCCCACCTGAACATCCTCCTGGGAGGAAGCAGGGCATGAATCCGAAGGAATTAGTGAAGTCCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441001.2