Pregenerated sensors for LINC02625 (Homo sapiens)
Ensembl gene IDs: ENSG00000233643Ensembl transcript IDs: ENST00000441001.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CCA 90 bp | CCTGATTTAATTGATTCATTGAATCATACTGCCTTTACTGACAACTaGTCCCAGCACCTTATACTTCAGCCCTTTTTGCTGAGACACACC | + |
Preference number: 5 (lower is better) Translates to: PDLIDSLNHTAFTDN*SQHLILQPFLLRHT Trigger: GGTGTGTCTCAGCAAAAAGGGCTGAAGTATAAGGTGCTGGGACCAGTTGTCAGTAAAGGCAGTATGATTCAATGAATCAATTAAATCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441001.2 |
||
CDS GCA 72 bp | GGCTATGGAAGGACTTCACTAATTCCTTCGGATTCATaGCCTGCTTCCTCCCAGGAGGATGTTCAGGTGGGG | + |
Preference number: 6 (lower is better) Translates to: GYGRTSLIPSDS*PASSQEDVQVG Trigger: CCCCACCTGAACATCCTCCTGGGAGGAAGCAGGGCATGAATCCGAAGGAATTAGTGAAGTCCTTCCATAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441001.2 |
||
CDS GCA 72 bp | TGGAAGGACTTCACTAATTCCTTCGGATTCATGCCCTaGTTCCTCCCAGGAGGATGTTCAGGTGGGGTAACC | + |
Preference number: 6 (lower is better) Translates to: WKDFTNSFGFMP*FLPGGCSGGVT Trigger: GGTTACCCCACCTGAACATCCTCCTGGGAGGAAGCAGGGCATGAATCCGAAGGAATTAGTGAAGTCCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441001.2 |