Pregenerated sensors for LINC02623 (Homo sapiens)
Ensembl gene IDs: ENSG00000234944Ensembl transcript IDs: ENST00000421320.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGTGTCCAAGACATGGGCAGTGGCCGTGATAACACCGCAGGTGTGTaGTCCCCAGAATGTGCTCCTGGTTGCCCCCTGAGGTGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SVQDMGSGRDNTAGV*SPECAPGCPLRCRV Trigger: GACCCTGCACCTCAGGGGGCAACCAGGAGCACATTCTGGGGAGCACACACCTGCGGTGTTATCACGGCCACTGCCCATGTCTTGGACACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS TCA 90 bp | GTCCTAGTCGCCTCTGGGACACAGGAGACCTTGCTGCCATGTGCCTaGATACATCCAAGGACTCACCAGCAGGAGGGAGGGGCGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLVASGTQETLLPCA*IHPRTHQQEGGAVV Trigger: GACAACCGCCCCTCCCTCCTGCTGGTGAGTCCTTGGATGTATTCAGGCACATGGCAGCAAGGTCTCCTGTGTCCCAGAGGCGACTAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 90 bp | GGGTTTCGTCCCGTGATGAGCCTTAGCATGAAGGAGTGGGGCACCTaGTGCTCACTTGTGGGTCCTAGTCGCCTCTGGGACACAGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GFRPVMSLSMKEWGT*CSLVGPSRLWDTGD Trigger: GTCTCCTGTGTCCCAGAGGCGACTAGGACCCACAAGTGAGCAGCAGGTGCCCCACTCCTTCATGCTAAGGCTCATCACGGGACGAAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CCA 90 bp | TACCACCTTGGGTTTCGTCCCGTGATGAGCCTTAGCATGAAGGAGTaGGGCACCTGCTGCTCACTTGTGGGTCCTAGTCGCCTCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: YHLGFRPVMSLSMKE*GTCCSLVGPSRLWD Trigger: GTCCCAGAGGCGACTAGGACCCACAAGTGAGCAGCAGGTGCCCCACTCCTTCATGCTAAGGCTCATCACGGGACGAAACCCAAGGTGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 90 bp | TTTCGTCCCGTGATGAGCCTTAGCATGAAGGAGTGGGGCACCTGCTaGTCACTTGTGGGTCCTAGTCGCCTCTGGGACACAGGAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: FRPVMSLSMKEWGTC*SLVGPSRLWDTGDL Trigger: AAGGTCTCCTGTGTCCCAGAGGCGACTAGGACCCACAAGTGAGCAGCAGGTGCCCCACTCCTTCATGCTAAGGCTCATCACGGGACGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 90 bp | TTGGTAGTGGGCCCTGTCACAGCCCATCATCATCCACTCACTCTATaGCCCATCTCCTTCAGGAAAGGGTGTCCAGCCGTCAGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVVGPVTAHHHPLTL*PISFRKGCPAVSTS Trigger: GCTGGTGCTGACGGCTGGACACCCTTTCCTGAAGGAGATGGGGCATAGAGTGAGTGGATGATGATGGGCTGTGACAGGGCCCACTACCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CCA 90 bp | AAGGAGTGGGGCACCTGCTGCTCACTTGTGGGTCCTAGTCGCCTCTaGGACACAGGAGACCTTGCTGCCATGTGCCTGAATACATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KEWGTCCSLVGPSRL*DTGDLAAMCLNTSK Trigger: CTTGGATGTATTCAGGCACATGGCAGCAAGGTCTCCTGTGTCCCAGAGGCGACTAGGACCCACAAGTGAGCAGCAGGTGCCCCACTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CCA 90 bp | ATGTGGATATCGTCTGGAGTGGGTGGCTGTCATGGCCACAGCCCCTaGCTCCAATACCACCTTGGGTTTCGTCCCGTGATGAGCCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: MWISSGVGGCHGHSP*LQYHLGFRPVMSLS Trigger: GCTAAGGCTCATCACGGGACGAAACCCAAGGTGGTATTGGAGCCAGGGGCTGTGGCCATGACAGCCACCCACTCCAGACGATATCCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CCA 90 bp | GTTCGTGATGTCATCAAGGCAGGCCACTCTGAACTATTCCGAATGTaGATATCGTCTGGAGTGGGTGGCTGTCATGGCCACAGCCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRDVIKAGHSELFRM*ISSGVGGCHGHSPW Trigger: CCAGGGGCTGTGGCCATGACAGCCACCCACTCCAGACGATATCCACATTCGGAATAGTTCAGAGTGGCCTGCCTTGATGACATCACGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 90 bp | CCGTCAGCACCAGCGGACAAAATGTACAGAAACCAAGCGGGCTCATaGGATAAAGAAAGGAGAGACCAAGGGCTGCACCTGAGGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSAPADKMYRNQAGS*DKERRDQGLHLRTS Trigger: ACTGGTCCTCAGGTGCAGCCCTTGGTCTCTCCTTTCTTTATCGCATGAGCCCGCTTGGTTTCTGTACATTTTGTCCGCTGGTGCTGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 90 bp | ACAAAAAGCCACGCTTATTTCTTGGGAAAGACCTTATCATGTGTTTaGTTAGATAAAGGTCCTGAGGACATCCCAGAGTCTCCAGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TKSHAYFLGKTLSCV*LDKGPEDIPESPAV Trigger: AACAGCTGGAGACTCTGGGATGTCCTCAGGACCTTTATCTAAGCAAACACATGATAAGGTCTTTCCCAAGAAATAAGCGTGGCTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 72 bp | GACATGGGCAGTGGCCGTGATAACACCGCAGGTGTGTaGTCCCCAGAATGTGCTCCTGGTTGCCCCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DMGSGRDNTAGV*SPECAPGCPLR Trigger: CCTCAGGGGGCAACCAGGAGCACATTCTGGGGAGCACACACCTGCGGTGTTATCACGGCCACTGCCCATGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 72 bp | CCCGTGATGAGCCTTAGCATGAAGGAGTGGGGCACCTaGTGCTCACTTGTGGGTCCTAGTCGCCTCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PVMSLSMKEWGT*CSLVGPSRLWD Trigger: GTCCCAGAGGCGACTAGGACCCACAAGTGAGCAGCAGGTGCCCCACTCCTTCATGCTAAGGCTCATCACGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CCA 72 bp | TCGTCTGGAGTGGGTGGCTGTCATGGCCACAGCCCCTaGCTCCAATACCACCTTGGGTTTCGTCCCGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSGVGGCHGHSP*LQYHLGFRPVM Trigger: CATCACGGGACGAAACCCAAGGTGGTATTGGAGCCAGGGGCTGTGGCCATGACAGCCACCCACTCCAGACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CCA 72 bp | GGCACCTGCTGCTCACTTGTGGGTCCTAGTCGCCTCTaGGACACAGGAGACCTTGCTGCCATGTGCCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GTCCSLVGPSRL*DTGDLAAMCLN Trigger: ATTCAGGCACATGGCAGCAAGGTCTCCTGTGTCCCAGAGGCGACTAGGACCCACAAGTGAGCAGCAGGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CCA 72 bp | GGGTTTCGTCCCGTGATGAGCCTTAGCATGAAGGAGTaGGGCACCTGCTGCTCACTTGTGGGTCCTAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GFRPVMSLSMKE*GTCCSLVGPSR Trigger: GCGACTAGGACCCACAAGTGAGCAGCAGGTGCCCCACTCCTTCATGCTAAGGCTCATCACGGGACGAAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 72 bp | GTGATGAGCCTTAGCATGAAGGAGTGGGGCACCTGCTaGTCACTTGTGGGTCCTAGTCGCCTCTGGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: VMSLSMKEWGTC*SLVGPSRLWDT Trigger: TGTGTCCCAGAGGCGACTAGGACCCACAAGTGAGCAGCAGGTGCCCCACTCCTTCATGCTAAGGCTCATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CCA 72 bp | GCACCTGAGGACCAGTCCAAGGATAGTAGGCCTGGGTaGAGCATAAAACTTGGCACTGAGCTTCCTGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: APEDQSKDSRPG*SIKLGTELPGS Trigger: GCTTCCAGGAAGCTCAGTGCCAAGTTTTATGCTCCACCCAGGCCTACTATCCTTGGACTGGTCCTCAGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CCA 72 bp | GTCATCAAGGCAGGCCACTCTGAACTATTCCGAATGTaGATATCGTCTGGAGTGGGTGGCTGTCATGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VIKAGHSELFRM*ISSGVGGCHGH Trigger: GTGGCCATGACAGCCACCCACTCCAGACGATATCCACATTCGGAATAGTTCAGAGTGGCCTGCCTTGATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 72 bp | CCAGCGGACAAAATGTACAGAAACCAAGCGGGCTCATaGGATAAAGAAAGGAGAGACCAAGGGCTGCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: PADKMYRNQAGS*DKERRDQGLHL Trigger: CAGGTGCAGCCCTTGGTCTCTCCTTTCTTTATCGCATGAGCCCGCTTGGTTTCTGTACATTTTGTCCGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CAA 90 bp | CCACAACAACCCTCCTCAACCAGGACAAAAAGCCACGCTTATTTCTaGGGAAAGACCTTATCATGTGTTTGCTTAGATAAAGGTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PQQPSSTRTKSHAYF*GKTLSCVCLDKGPE Trigger: CTCAGGACCTTTATCTAAGCAAACACATGATAAGGTCTTTCCCAAGAAATAAGCGTGGCTTTTTGTCCTGGTTGAGGAGGGTTGTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS GCA 72 bp | CACGCTTATTTCTTGGGAAAGACCTTATCATGTGTTTaGTTAGATAAAGGTCCTGAGGACATCCCAGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HAYFLGKTLSCV*LDKGPEDIPES Trigger: AGACTCTGGGATGTCCTCAGGACCTTTATCTAAGCAAACACATGATAAGGTCTTTCCCAAGAAATAAGCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||
| CDS CAA 72 bp | CCCTCCTCAACCAGGACAAAAAGCCACGCTTATTTCTaGGGAAAGACCTTATCATGTGTTTGCTTAGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: PSSTRTKSHAYF*GKTLSCVCLDK Trigger: TTTATCTAAGCAAACACATGATAAGGTCTTTCCCAAGAAATAAGCGTGGCTTTTTGTCCTGGTTGAGGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000421320.1 |
||