Pregenerated sensors for LINC02622 (Homo sapiens)
Ensembl gene IDs: ENSG00000259267Ensembl transcript IDs: ENST00000558852.2, ENST00000560700.2, ENST00000654967.1, ENST00000664582.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGCCCTTTCTCCCACTAGCTCTGGACCCAGGTGGGTCCTGGCTGTaGATGATCCCACTTGGCCTGCCCCTACCCCTCCAAGCTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: EPFLPLALDPGGSWL*MIPLGLPLPLQAGQ Trigger: CTGCCCAGCTTGGAGGGGTAGGGGCAGGCCAAGTGGGATCATGCACAGCCAGGACCCACCTGGGTCCAGAGCTAGTGGGAGAAAGGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS CCA 90 bp | GCCCATGAGCCCTTTCTCCCACTAGCTCTGGACCCAGGTGGGTCCTaGCTGTGCATGATCCCACTTGGCCTGCCCCTACCCCTCCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: AHEPFLPLALDPGGS*LCMIPLGLPLPLQA Trigger: AGCTTGGAGGGGTAGGGGCAGGCCAAGTGGGATCATGCACAGCCAGGACCCACCTGGGTCCAGAGCTAGTGGGAGAAAGGGCTCATGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS TCA 90 bp | AAATCTGGCCTTGGTGGGCTGAAGATGAGGAGGAGGAGGCCGGGGTaGGAGGGAGGAGGCTGTGGTGGCATCCAGACAAGGGTGCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: KSGLGGLKMRRRRPG*EGGGCGGIQTRVPS Trigger: TGAAGGCACCCTTGTCTGGATGCCACCACAGCCTCCTCCCTCTCACCCCGGCCTCCTCCTCCTCATCTTCAGCCCACCAAGGCCAGATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS CCA 90 bp | CTGGCTGTGCATGATCCCACTTGGCCTGCCCCTACCCCTCCAAGCTaGGCAGTTAGGAAAGGTGGCGCATTTCACTTGTGCTGTGTGACC | + |
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Preference number: 5 (lower is better) Translates to: LAVHDPTWPAPTPPS*AVRKGGAFHLCCVT Trigger: GGTCACACAGCACAAGTGAAATGCGCCACCTTTCCTAACTGCCCAGCTTGGAGGGGTAGGGGCAGGCCAAGTGGGATCATGCACAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS TCA 90 bp | GCCTGGATGGGCTGGCGGGAGCAGGCACAGGCGTCCAGAGGAGGCTaGTGCGTTTATAATGATGCCACTTTGCAAGACAAATCTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: AWMGWREQAQASRGG*CVYNDATLQDKSGL Trigger: AAGGCCAGATTTGTCTTGCAAAGTGGCATCATTATAAACGCATCAGCCTCCTCTGGACGCCTGTGCCTGCTCCCGCCAGCCCATCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS GCA 90 bp | TTAGCCACAATCACAGTGGGGTGCATTAGGCAGACACAGCCTCAGTaGAGCGGCAGCAGCTCTTGGGAAGCAAGAGCCCAGGGCTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LATITVGCIRQTQPQ*SGSSSWEARAQGFE Trigger: TTCAAAGCCCTGGGCTCTTGCTTCCCAAGAGCTGCTGCCGCTGCACTGAGGCTGTGTCTGCCTAATGCACCCCACTGTGATTGTGGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS GCA 90 bp | AAGGTGGCAGGTGGAGGGCATCAGAAGAGGATTCCAGGCAACAGTTaGAAAGGCCTAGAGACCAGAAAGAGCCTCTGGGGTAGCGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: KVAGGGHQKRIPGNS*KGLETRKSLWGSVA Trigger: GGCTACGCTACCCCAGAGGCTCTTTCTGGTCTCTAGGCCTTTGCAACTGTTGCCTGGAATCCTCTTCTGATGCCCTCCACCTGCCACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS CCA 90 bp | CCACTTCTTCATTTCACTCAGGAGTCCCAGCCTGCAGAAATTCTTTaGGGACCTGTTGTGGCTTCTGTTGGGTGGGCCGTCCCTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: PLLHFTQESQPAEIL*GPVVASVGWAVPLS Trigger: GCTGAGAGGGACGGCCCACCCAACAGAAGCCACAACAGGTCCCCAAAGAATTTCTGCAGGCTGGGACTCCTGAGTGAAATGAAGAAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000560700.2 ENST00000654967.1 ENST00000664582.1 |
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| CDS CCA 90 bp | CAAAGCCCTAGGAGATCTTCCAGATTTCTCCAGGCAGCAGGAAACTaGGGGACAGGTCTTTACTTCCCACCCCATCATCCAAGAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: QSPRRSSRFLQAAGN*GTGLYFPPHHPRGC Trigger: ACAGCCTCTTGGATGATGGGGTGGGAAGTAAAGACCTGTCCCCCAGTTTCCTGCTGCCTGGAGAAATCTGGAAGATCTCCTAGGGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS TCA 90 bp | AAATTAATTTTATGCAGTTGCGATGTCAGCAATGTGACTTGCCAATaGCTGAGGCCACTCGGACAGACTTGGCAAGGGCTGCAGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: KLILCSCDVSNVTCQ*LRPLGQTWQGLQGR Trigger: CCTGCCCTGCAGCCCTTGCCAAGTCTGTCCGAGTGGCCTCAGTCATTGGCAAGTCACATTGCTGACATCGCAACTGCATAAAATTAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558852.2 ENST00000654967.1 |
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| CDS GCA 90 bp | CACCTCATTCCAGGTAACATATATACCTTCTGCTCACATCCCATTTaGTGGAGTGAGTCATGTGACCAACCTAAGAGCAAGGGAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: HLIPGNIYTFCSHPI*WSESCDQPKSKGGP Trigger: TGGGCCTCCCTTGCTCTTAGGTTGGTCACATGACTCACTCCAGCAAATGGGATGTGAGCAGAAGGTATATATGTTACCTGGAATGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560700.2 |
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| CDS GCA 90 bp | ACATCTCGGTGGCTTTGTGCAGGAAGGTTGATTTCTCAGTGGCTTTaGGCAGTGAGGTTGATTTCTTACTCATATGACCCATGTCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: TSRWLCAGRLISQWL*AVRLISYSYDPCQA Trigger: TGCTTGACATGGGTCATATGAGTAAGAAATCAACCTCACTGCGCAAAGCCACTGAGAAATCAACCTTCCTGCACAAAGCCACCGAGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS TCA 90 bp | CAGGTTCCTTTCATCTTGTGGCTCCACCATCTTGCAGCTTCAAAATaGTCTTGGCATCACTCAGGCAACAAGGATTGTAGAAAAGCACAC | + |
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Preference number: 5 (lower is better) Translates to: QVPFILWLHHLAASK*SWHHSGNKDCRKAH Trigger: GTGTGCTTTTCTACAATCCTTGTTGCCTGAGTGATGCCAAGATCATTTTGAAGCTGCAAGATGGTGGAGCCACAAGATGAAAGGAACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS GCA 90 bp | CACCAGGTAATTATTCACCTCATTCCAGGTAACATATATACCTTCTaGTCACATCCCATTTGCTGGAGTGAGTCATGTGACCAACCTAAG | + |
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Preference number: 5 (lower is better) Translates to: HQVIIHLIPGNIYTF*SHPICWSESCDQPK Trigger: CTTAGGTTGGTCACATGACTCACTCCAGCAAATGGGATGTGAGCAGAAGGTATATATGTTACCTGGAATGAGGTGAATAATTACCTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS CCA 72 bp | AAGGGAGGCCCAGACAGCCTCAGATGTAATCGAGCCTaGATGGGCTGGCGGGAGCAGGCACAGGCGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: KGGPDSLRCNRA*MGWREQAQASR Trigger: TCTGGACGCCTGTGCCTGCTCCCGCCAGCCCATCCAGGCTCGATTACATCTGAGGCTGTCTGGGCCTCCCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560700.2 |
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| CDS CCA 72 bp | CCCTTTCTCCCACTAGCTCTGGACCCAGGTGGGTCCTaGCTGTGCATGATCCCACTTGGCCTGCCCCTACCC | + |
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Preference number: 6 (lower is better) Translates to: PFLPLALDPGGS*LCMIPLGLPLP Trigger: GGGTAGGGGCAGGCCAAGTGGGATCATGCACAGCCAGGACCCACCTGGGTCCAGAGCTAGTGGGAGAAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS CAA 72 bp | TGTGACTTGCCAATGACTGAGGCCACTCGGACAGACTaGGCAAGGGCTGCAGGGCAGGCTCAGCGGGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: CDLPMTEATRTD*ARAAGQAQRGV Trigger: AACACCCCGCTGAGCCTGCCCTGCAGCCCTTGCCAAGTCTGTCCGAGTGGCCTCAGTCATTGGCAAGTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558852.2 ENST00000654967.1 |
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| CDS GCA 72 bp | ATCACAGTGGGGTGCATTAGGCAGACACAGCCTCAGTaGAGCGGCAGCAGCTCTTGGGAAGCAAGAGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ITVGCIRQTQPQ*SGSSSWEARAQ Trigger: CTGGGCTCTTGCTTCCCAAGAGCTGCTGCCGCTGCACTGAGGCTGTGTCTGCCTAATGCACCCCACTGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS CCA 72 bp | AGTCCCAGCCTGCAGAAATTCTTTGGGGACCTGTTGTaGCTTCTGTTGGGTGGGCCGTCCCTCTCAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPSLQKFFGDLL*LLLGGPSLSAW Trigger: CCAGGCTGAGAGGGACGGCCCACCCAACAGAAGCCACAACAGGTCCCCAAAGAATTTCTGCAGGCTGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654967.1 ENST00000664582.1 |
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| CDS CCA 72 bp | TGCAGAAATTCTTTGGGGACCTGTTGTGGCTTCTGTTaGGTGGGCCGTCCCTCTCAGCCTGGTGACATGGCC | + |
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Preference number: 6 (lower is better) Translates to: CRNSLGTCCGFC*VGRPSQPGDMA Trigger: GGCCATGTCACCAGGCTGAGAGGGACGGCCCACCCAACAGAAGCCACAACAGGTCCCCAAAGAATTTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654967.1 |
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| CDS CCA 72 bp | TTAATTACCCCAGACAGCCTCAGATGTAATCGAGCCTaGATGGGCTGGCGGGAGCAGGCACAGGCGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LITPDSLRCNRA*MGWREQAQASR Trigger: TCTGGACGCCTGTGCCTGCTCCCGCCAGCCCATCCAGGCTCGATTACATCTGAGGCTGTCTGGGGTAATTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS CAA 90 bp | CCCACTTCTTCATTTCACTCAGGAGTCCCAGCCTGCAGAAATTCTTaGGGGACCTGTTGTGGCTTCTGTTGGGTGGGCCGTCCCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PTSSFHSGVPACRNS*GTCCGFCWVGRPSQ Trigger: CTGAGAGGGACGGCCCACCCAACAGAAGCCACAACAGGTCCCCAAAGAATTTCTGCAGGCTGGGACTCCTGAGTGAAATGAAGAAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000560700.2 ENST00000654967.1 ENST00000664582.1 |
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| CDS TCA 72 bp | GGCTGGCGGGAGCAGGCACAGGCGTCCAGAGGAGGCTaGTGCGTTTATAATGATGCCACTTTGCAAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: GWREQAQASRGG*CVYNDATLQDK Trigger: TTTGTCTTGCAAAGTGGCATCATTATAAACGCATCAGCCTCCTCTGGACGCCTGTGCCTGCTCCCGCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS GCA 72 bp | GGTGGAGGGCATCAGAAGAGGATTCCAGGCAACAGTTaGAAAGGCCTAGAGACCAGAAAGAGCCTCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GGGHQKRIPGNS*KGLETRKSLWG Trigger: ACCCCAGAGGCTCTTTCTGGTCTCTAGGCCTTTGCAACTGTTGCCTGGAATCCTCTTCTGATGCCCTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS CAA 72 bp | GCGGCAGCAGCTCTTGGGAAGCAAGAGCCCAGGGCTTaGAACACTGCATTACAACAGGGGATGCGTCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: AAAALGKQEPRA*NTALQQGMRPN Trigger: ATTAGGACGCATCCCCTGTTGTAATGCAGTGTTCAAAGCCCTGGGCTCTTGCTTCCCAAGAGCTGCTGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS GCA 72 bp | AGCTGGGCAGTTAGGAAAGGTGGCGCATTTCACTTGTaGTGTGTGACCTTGGGCAAGTCAGTAACCCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SWAVRKGGAFHL*CVTLGKSVTPS Trigger: AGAGGGGGTTACTGACTTGCCCAAGGTCACACAGCACAAGTGAAATGCGCCACCTTTCCTAACTGCCCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS CAA 72 bp | TCATTTCACTCAGGAGTCCCAGCCTGCAGAAATTCTTaGGGGACCTGTTGTGGCTTCTGTTGGGTGGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: SFHSGVPACRNS*GTCCGFCWVGR Trigger: ACGGCCCACCCAACAGAAGCCACAACAGGTCCCCAAAGAATTTCTGCAGGCTGGGACTCCTGAGTGAAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000560700.2 ENST00000654967.1 ENST00000664582.1 |
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| CDS TCA 72 bp | TTATGCAGTTGCGATGTCAGCAATGTGACTTGCCAATaGCTGAGGCCACTCGGACAGACTTGGCAAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LCSCDVSNVTCQ*LRPLGQTWQGL Trigger: CAGCCCTTGCCAAGTCTGTCCGAGTGGCCTCAGTCATTGGCAAGTCACATTGCTGACATCGCAACTGCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558852.2 ENST00000654967.1 |
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| CDS CCA 72 bp | AGGAGATCTTCCAGATTTCTCCAGGCAGCAGGAAACTaGGGGACAGGTCTTTACTTCCCACCCCATCATCCA | + |
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Preference number: 6 (lower is better) Translates to: RRSSRFLQAAGN*GTGLYFPPHHP Trigger: TGGATGATGGGGTGGGAAGTAAAGACCTGTCCCCCAGTTTCCTGCTGCCTGGAGAAATCTGGAAGATCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS CAA 72 bp | GTAGCCCCAACATCTCGGTGGCTTTGTGCAGGAAGGTaGATTTCTCAGTGGCTTTGCGCAGTGAGGTTGATT | + |
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Preference number: 6 (lower is better) Translates to: VAPTSRWLCAGR*ISQWLCAVRLI Trigger: AATCAACCTCACTGCGCAAAGCCACTGAGAAATCAACCTTCCTGCACAAAGCCACCGAGATGTTGGGGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS CCA 72 bp | CATCCTCTCTTGTCATGCCTGCTTCTCAGGGCTAGCTaGCAGACTTCACATTTCTCTCTGTTGAATCCCACT | + |
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Preference number: 6 (lower is better) Translates to: HPLLSCLLLRAS*QTSHFSLLNPT Trigger: AGTGGGATTCAACAGAGAGAAATGTGAAGTCTGCCAGCTAGCCCTGAGAAGCAGGCATGACAAGAGAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000558852.2 ENST00000654967.1 |
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| CDS CAA 90 bp | AGGCCCTGTAGCTCAGTAGATGACCTTGCCCAGATGAGACGTCTTTaGGGAATTCCTTTGCCCTATTCTAATCCTGCCTCAACAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RPCSSVDDLAQMRRL*GIPLPYSNPASTAK Trigger: CTTTGCTGTTGAGGCAGGATTAGAATAGGGCAAAGGAATTCCCAAAAGACGTCTCATCTGGGCAAGGTCATCTACTGAGCTACAGGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS GCA 72 bp | ACTCTAATAAGTAGCCCCAACATCTCGGTGGCTTTGTaGAGGAAGGTTGATTTCTCAGTGGCTTTGCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: TLISSPNISVAL*RKVDFSVALRS Trigger: ACTGCGCAAAGCCACTGAGAAATCAACCTTCCTGCACAAAGCCACCGAGATGTTGGGGCTACTTATTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS CAA 72 bp | CTCAGGGCTAGCTGGCAGACTTCACATTTCTCTCTGTaGAATCCCACTTCTTCATTTCACTCAGGAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LRASWQTSHFSL*NPTSSFHSGVP Trigger: TGGGACTCCTGAGTGAAATGAAGAAGTGGGATTCAACAGAGAGAAATGTGAAGTCTGCCAGCTAGCCCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654967.1 |
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| CDS CAA 72 bp | AGCTCAGTAGATGACCTTGCCCAGATGAGACGTCTTTaGGGAATTCCTTTGCCCTATTCTAATCCTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSVDDLAQMRRL*GIPLPYSNPAS Trigger: TGAGGCAGGATTAGAATAGGGCAAAGGAATTCCCAAAAGACGTCTCATCTGGGCAAGGTCATCTACTGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664582.1 |
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| CDS GCA 72 bp | CCAGGTAACATATATACCTTCTGCTCACATCCCATTTaGTGGAGTGAGTCATGTGACCAACCTAAGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PGNIYTFCSHPI*WSESCDQPKSK Trigger: CTTGCTCTTAGGTTGGTCACATGACTCACTCCAGCAAATGGGATGTGAGCAGAAGGTATATATGTTACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS GCA 72 bp | TGGCTTTGTGCAGGAAGGTTGATTTCTCAGTGGCTTTaGGCAGTGAGGTTGATTTCTTACTCATATGACCCA | + |
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Preference number: 6 (lower is better) Translates to: WLCAGRLISQWL*AVRLISYSYDP Trigger: TGGGTCATATGAGTAAGAAATCAACCTCACTGCGCAAAGCCACTGAGAAATCAACCTTCCTGCACAAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS CAA 72 bp | TCATTCCCTAGCTGGCAGACTTCACATTTCTCTCTGTaGAATCCCACTTCTTCATTTCACTCAGGAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SFPSWQTSHFSL*NPTSSFHSGVP Trigger: TGGGACTCCTGAGTGAAATGAAGAAGTGGGATTCAACAGAGAGAAATGTGAAGTCTGCCAGCTAGGGAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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| CDS CAA 72 bp | ATTAATTTTATGCAGTTGCGATGTCAGCAATGTGACTaGCCAATGACTGAGGCCACTCGGACAGACTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: INFMQLRCQQCD*PMTEATRTDLA Trigger: TGCCAAGTCTGTCCGAGTGGCCTCAGTCATTGGCAAGTCACATTGCTGACATCGCAACTGCATAAAATTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000558852.2 ENST00000654967.1 |
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| CDS TCA 72 bp | TTCATCTTGTGGCTCCACCATCTTGCAGCTTCAAAATaGTCTTGGCATCACTCAGGCAACAAGGATTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: FILWLHHLAASK*SWHHSGNKDCR Trigger: TCTACAATCCTTGTTGCCTGAGTGATGCCAAGATCATTTTGAAGCTGCAAGATGGTGGAGCCACAAGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000560700.2 ENST00000664582.1 |
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