Pregenerated sensors for LINC02613 (Homo sapiens)
Ensembl gene IDs: ENSG00000231367Ensembl transcript IDs: ENST00000413227.2, ENST00000417039.6, ENST00000421463.6, ENST00000437979.1, ENST00000438085.1, ENST00000658016.1, ENST00000659803.1, ENST00000661472.1, ENST00000667944.1, ENST00000669322.1, ENST00000669429.1, ENST00000671178.1
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CACTGCGCACCAGACACATGGCTCTGGGGCTCGGCTCGCCTGAAATaGCTTGTCATGGTAGGCGCGCAGGCGCCCAGAGAAAGAGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: HCAPDTWLWGSARLK*LVMVGAQAPRERAS Trigger: GCTCGCTCTTTCTCTGGGCGCCTGCGCGCCTACCATGACAAGCCATTTCAGGCGAGCCGAGCCCCAGAGCCATGTGTCTGGTGCGCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 |
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| CDS CCA 90 bp | GAGGGAGAAAGGCTGAACATTCCTCAGCGTCGGCGTCGGCGTCCATaGGGGGCTCTGAGCGATGGCCTTCTCCGCTTGCAAGGTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: EGERLNIPQRRRRRP*GALSDGLLRLQGHW Trigger: CCAATGACCTTGCAAGCGGAGAAGGCCATCGCTCAGAGCCCCCCATGGACGCCGACGCCGACGCTGAGGAATGTTCAGCCTTTCTCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669429.1 |
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| CDS GCA 90 bp | GAAGTCCAGAGAAGGTGGAGAGCTGTGAGCAGCCAGAGCGAGGGCTaGAGGATGGTCAGCGGCAGCCTCTGCTTTCCTCCACTCCACAGA | + |
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Preference number: 5 (lower is better) Translates to: EVQRRWRAVSSQSEG*RMVSGSLCFPPLHR Trigger: TCTGTGGAGTGGAGGAAAGCAGAGGCTGCCGCTGACCATCCTGCAGCCCTCGCTCTGGCTGCTCACAGCTCTCCACCTTCTCTGGACTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS TCA 90 bp | TGCCTCTCTAGGGGCCACCTTTGCTCAGAGGCTCCGTTAGGCTGGTaGAGCAGGGGGCTACAGTGGGAGGGAGAAAGGCTGAACATTCCT | + |
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Preference number: 5 (lower is better) Translates to: CLSRGHLCSEAPLGW*SRGLQWEGERLNIP Trigger: AGGAATGTTCAGCCTTTCTCCCTCCCACTGTAGCCCCCTGCTTCACCAGCCTAACGGAGCCTCTGAGCAAAGGTGGCCCCTAGAGAGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669429.1 |
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| CDS GCA 90 bp | GTGAGCAGCCAGAGCGAGGGCTGCAGGATGGTCAGCGGCAGCCTCTaGTTTCCTCCACTCCACAGACACTACTCCTGTCTCTTAACTTGC | + |
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Preference number: 5 (lower is better) Translates to: VSSQSEGCRMVSGSL*FPPLHRHYSCLLTC Trigger: GCAAGTTAAGAGACAGGAGTAGTGTCTGTGGAGTGGAGGAAAGCAGAGGCTGCCGCTGACCATCCTGCAGCCCTCGCTCTGGCTGCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS GCA 90 bp | CGGCAAGCAGTTCAGTGTCTCCATTCTGTTCACCCCCTGTGGCCCTaGTCAAATCCTTGTCAGCTACCCATGCCATGGGCAGCCCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: RQAVQCLHSVHPLWP*SNPCQLPMPWAAPC Trigger: GCAAGGGGCTGCCCATGGCATGGGTAGCTGACAAGGATTTGAGCAGGGCCACAGGGGGTGAACAGAATGGAGACACTGAACTGCTTGCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS CCA 90 bp | GGCTCCCACAGCCCTCCTGTGCCCATAGAAGGGAAGCACTTGCTCTaGACCTTGGCATTCTTGAAGGGATGCGTGGTGGGTCTTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GSHSPPVPIEGKHLL*TLAFLKGCVVGLPP Trigger: TGGAGGAAGACCCACCACGCATCCCTTCAAGAATGCCAAGGTCCAGAGCAAGTGCTTCCCTTCTATGGGCACAGGAGGGCTGTGGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS CCA 90 bp | AATCCCCGGCAAGCAGTTCAGTGTCTCCATTCTGTTCACCCCCTGTaGCCCTGCTCAAATCCTTGTCAGCTACCCATGCCATGGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: NPRQAVQCLHSVHPL*PCSNPCQLPMPWAA Trigger: GGCTGCCCATGGCATGGGTAGCTGACAAGGATTTGAGCAGGGCCACAGGGGGTGAACAGAATGGAGACACTGAACTGCTTGCCGGGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS GCA 90 bp | CGTTCTGCTCACAATGCCGTTTGCCTCTGCTGTTGGACTGGAGACTaGTGCCCAAGACATTTCATCTCCTGCAGCTTCCTGGAGCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: RSAHNAVCLCCWTGD*CPRHFISCSFLEPL Trigger: AAGGGGCTCCAGGAAGCTGCAGGAGATGAAATGTCTTGGGCAGCAGTCTCCAGTCCAACAGCAGAGGCAAACGGCATTGTGAGCAGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS CCA 90 bp | CTTGAAGGGATGCGTGGTGGGTCTTCCTCCAGCAGAGATGGTTCCTaGCCTCCTATTCTGGCACAGTTGACTGTGAGACCACGTGCAACT | + |
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Preference number: 5 (lower is better) Translates to: LEGMRGGSSSSRDGS*PPILAQLTVRPRAT Trigger: AGTTGCACGTGGTCTCACAGTCAACTGTGCCAGAATAGGAGGCCAGGAACCATCTCTGCTGGAGGAAGACCCACCACGCATCCCTTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS GCA 90 bp | TGGTTCCTGGCCTCCTATTCTGGCACAGTTGACTGTGAGACCACGTaGAACTTCCACCTTCCCAAGAGCTTCAGTTTCCTGCCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: WFLASYSGTVDCETT*NFHLPKSFSFLPWK Trigger: CTTCCAGGGCAGGAAACTGAAGCTCTTGGGAAGGTGGAAGTTGCACGTGGTCTCACAGTCAACTGTGCCAGAATAGGAGGCCAGGAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS GCA 90 bp | CTTTCAAGCAATTCCCCTTTGCTTCTTGCTCTGAGGAGCAGAGTCTaGCCAGCGTCCAGGCCACATCATTCTCCACGACTCCTGATGCCT | + |
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Preference number: 5 (lower is better) Translates to: LSSNSPLLLALRSRV*PASRPHHSPRLLMP Trigger: AGGCATCAGGAGTCGTGGAGAATGATGTGGCCTGGACGCTGGGCAGACTCTGCTCCTCAGAGCAAGAAGCAAAGGGGAATTGCTTGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS TCA 90 bp | ACCATATCACTTCTCTCCTCTGGGATTCCATCACCCCTGATTCCCTaGCCACCTTGGCACCTCAGACCAACTGATTCCCACCCTACTGTC | + |
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Preference number: 5 (lower is better) Translates to: TISLLSSGIPSPLIP*PPWHLRPTDSHPTV Trigger: GACAGTAGGGTGGGAATCAGTTGGTCTGAGGTGCCAAGGTGGTCAGGGAATCAGGGGTGATGGAATCCCAGAGGAGAGAAGTGATATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659803.1 |
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| CDS TCA 90 bp | AGAGCCAAACCATATCACTTCTCTCCTCTGGGATTCCATCACCCCTaGTTCCCTGACCACCTTGGCACCTCAGACCAACTGATTCCCACC | + |
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Preference number: 5 (lower is better) Translates to: RAKPYHFSPLGFHHP*FPDHLGTSDQLIPT Trigger: GGTGGGAATCAGTTGGTCTGAGGTGCCAAGGTGGTCAGGGAATCAGGGGTGATGGAATCCCAGAGGAGAGAAGTGATATGGTTTGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659803.1 |
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| CDS GCA 90 bp | TCTTCCACACATCACTCGCCTTTCAAGCAATTCCCCTTTGCTTCTTaGTCTGAGGAGCAGAGTCTGCCCAGCGTCCAGGCCACATCATTC | + |
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Preference number: 5 (lower is better) Translates to: SSTHHSPFKQFPFAS*SEEQSLPSVQATSF Trigger: GAATGATGTGGCCTGGACGCTGGGCAGACTCTGCTCCTCAGAGCAAGAAGCAAAGGGGAATTGCTTGAAAGGCGAGTGATGTGTGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS GCA 90 bp | GGCCTTCTCCGCTTGCAAGGTCATTGGTCTTTGAGCCGGACTCGCTaGCTAAGGCAGGCTAAGACTGGCATATTAGCATTCCATCTACAT | + |
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Preference number: 5 (lower is better) Translates to: GLLRLQGHWSLSRTR*LRQAKTGILAFHLH Trigger: ATGTAGATGGAATGCTAATATGCCAGTCTTAGCCTGCCTTAGGCAGCGAGTCCGGCTCAAAGACCAATGACCTTGCAAGCGGAGAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669429.1 |
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| CDS GCA 90 bp | GGAAAGTCAAAGCCATTAGGCACACTCCAGGTTTTCCCTCTGCCCTaGTTTCCTCTTCCACACATCACTCGCCTTTCAAGCAATTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: GKSKPLGTLQVFPLP*FPLPHITRLSSNSP Trigger: AGGGGAATTGCTTGAAAGGCGAGTGATGTGTGGAAGAGGAAAGCAGGGCAGAGGGAAAACCTGGAGTGTGCCTAATGGCTTTGACTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS CCA 90 bp | ATTATTGCAAAACAGCTCACCTTCCCTCTTCCCGTTCTGCATGGCTaGGAAGGCCTCAGGAAACTTACAATCCTGGTGGAAGGCAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: IIAKQLTFPLPVLHG*EGLRKLTILVEGKG Trigger: CCCTTTGCCTTCCACCAGGATTGTAAGTTTCCTGAGGCCTTCCCAGCCATGCAGAACGGGAAGAGGGAAGGTGAGCTGTTTTGCAATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659803.1 |
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| CDS CCA 90 bp | ATTACTTCGTTCTGCTCACAATGCCGTTTGCCTCTGCTGTTGGACTaGAGACTGCTGCCCAAGACATTTCATCTCCTGCAGCTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: ITSFCSQCRLPLLLD*RLLPKTFHLLQLPG Trigger: TCCAGGAAGCTGCAGGAGATGAAATGTCTTGGGCAGCAGTCTCCAGTCCAACAGCAGAGGCAAACGGCATTGTGAGCAGAACGAAGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS TCA 90 bp | TGTGCCCTTAAGAGAATGATGCAGGCAGCCGGGTTCGTCTTTCTCTaGGCTGCCATGGGGAAGGTGTGGTCTTTGTTTCTGAACATGTTT | + |
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Preference number: 5 (lower is better) Translates to: CALKRMMQAAGFVFL*AAMGKVWSLFLNMF Trigger: AAACATGTTCAGAAACAAAGACCACACCTTCCCCATGGCAGCTCAGAGAAAGACGAACCCGGCTGCCTGCATCATTCTCTTAAGGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659803.1 |
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| CDS GCA 90 bp | TTGGAGGAATTATTGCAAAACAGCTCACCTTCCCTCTTCCCGTTCTaGATGGCTGGGAAGGCCTCAGGAAACTTACAATCCTGGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LEELLQNSSPSLFPF*MAGKASGNLQSWWK Trigger: CTTCCACCAGGATTGTAAGTTTCCTGAGGCCTTCCCAGCCATGCAGAACGGGAAGAGGGAAGGTGAGCTGTTTTGCAATAATTCCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659803.1 |
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| CDS CCA 90 bp | TCCCAGCCCTGTCTCAGGCCATTTGTCTGTCAGGCCTCTGGATGGTaGAGTTGGTCTCAGTGTTTACTAAACAAACCAATGTGGTTATCC | + |
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Preference number: 5 (lower is better) Translates to: SQPCLRPFVCQASGW*SWSQCLLNKPMWLS Trigger: GGATAACCACATTGGTTTGTTTAGTAAACACTGAGACCAACTCCACCATCCAGAGGCCTGACAGACAAATGGCCTGAGACAGGGCTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000417039.6 ENST00000438085.1 ENST00000667944.1 ENST00000669322.1 ENST00000669429.1 ENST00000671178.1 |
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| CDS TCA 90 bp | CTTCTACTCACGTCCCCTTGGTCAAAGCAATCTTGTGGTGAAGCCTaGTTTCATGAGGTGGGATATATCACCTTCCACCTTGGGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLLTSPWSKQSCGEA*FHEVGYITFHLGRK Trigger: CTTCCTCCCAAGGTGGAAGGTGATATATCCCACCTCATGAAATCAGGCTTCACCACAAGATTGCTTTGACCAAGGGGACGTGAGTAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421463.6 |
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| CDS CCA 90 bp | CTTTCCCAGCCCTGTCTCAGGCCATTTGTCTGTCAGGCCTCTGGATaGTGGAGTTGGTCTCAGTGTTTACTAAACAAACCAATGTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: LSQPCLRPFVCQASG*WSWSQCLLNKPMWL Trigger: TAACCACATTGGTTTGTTTAGTAAACACTGAGACCAACTCCACCATCCAGAGGCCTGACAGACAAATGGCCTGAGACAGGGCTGGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000417039.6 ENST00000438085.1 ENST00000667944.1 ENST00000669322.1 ENST00000669429.1 ENST00000671178.1 |
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| CDS CCA 90 bp | TCTGGATGGTGGAGTTGGTCTCAGTGTTTACTAAACAAACCAATGTaGTTATCCCATGGAGATCGTTCTGCATGGCTGGGAAGGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SGWWSWSQCLLNKPM*LSHGDRSAWLGRPQ Trigger: CTGAGGCCTTCCCAGCCATGCAGAACGATCTCCATGGGATAACCACATTGGTTTGTTTAGTAAACACTGAGACCAACTCCACCATCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669322.1 |
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| CDS CCA 90 bp | AAAACTTTCCCAGCCCTGTCTCAGGCCATTTGTCTGTCAGGCCTCTaGATGGTGGAGTTGGTCTCAGTGTTTACTAAACAAACCAATGTG | + |
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Preference number: 5 (lower is better) Translates to: KTFPALSQAICLSGL*MVELVSVFTKQTNV Trigger: CACATTGGTTTGTTTAGTAAACACTGAGACCAACTCCACCATCCAGAGGCCTGACAGACAAATGGCCTGAGACAGGGCTGGGAAAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000417039.6 ENST00000438085.1 ENST00000667944.1 ENST00000669322.1 ENST00000669429.1 ENST00000671178.1 |
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| CDS GCA 90 bp | GTGTTTACTAAACAAACCAATGTGGTTATCCCATGGAGATCGTTCTaGATGGCTGGGAAGGCCTCAGGAAACTTACAATCCTGGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VFTKQTNVVIPWRSF*MAGKASGNLQSWWK Trigger: CTTCCACCAGGATTGTAAGTTTCCTGAGGCCTTCCCAGCCATGCAGAACGATCTCCATGGGATAACCACATTGGTTTGTTTAGTAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669322.1 |
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| CDS GCA 90 bp | TTCCCCAAACCTGCCCCTCCACCCTTGAATACATCCAAATGTCATTaGAAATTTCTGACCTTCAGCAACAAGTCAGTACCTAGAGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: FPKPAPPPLNTSKCH*KFLTFSNKSVPRGL Trigger: CAAACCTCTAGGTACTGACTTGTTGCTGAAGGTCAGAAATTTGCAATGACATTTGGATGTATTCAAGGGTGGAGGGGCAGGTTTGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671178.1 |
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| CDS TCA 90 bp | GGCCATAGAAAACCACAGAACCTAACTACATACGCATTCTTGCTTTaGATGATTACTTCGTTCTGCTCACAATGCCGTTTGCCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: GHRKPQNLTTYAFLL*MITSFCSQCRLPLL Trigger: CAGCAGAGGCAAACGGCATTGTGAGCAGAACGAAGTAATCATTCAAAGCAAGAATGCGTATGTAGTTAGGTTCTGTGGTTTTCTATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS CCA 90 bp | TTTCCAAATGGCCTTGAAGCTTTCCCTAAATGTCTCCTTCTGGATTaGTTTGGCAAACATTATCTAAGTATCCGTCATATGCCAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: FPNGLEAFPKCLLLD*FGKHYLSIRHMPAT Trigger: AGTGGCTGGCATATGACGGATACTTAGATAATGTTTGCCAAACCAATCCAGAAGGAGACATTTAGGGAAAGCTTCAAGGCCATTTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659803.1 |
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| CDS CCA 72 bp | CAGCAACACGAGTCGGAGCAAGCATCTGGTAGCACCTaGTCCCTGACTCCTGGGTCCCTGGGCCTGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QQHESEQASGST*SLTPGSLGLPA Trigger: TGCAGGCAGGCCCAGGGACCCAGGAGTCAGGGACCAGGTGCTACCAGATGCTTGCTCCGACTCGTGTTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS CCA 72 bp | AGGCTGAACATTCCTCAGCGTCGGCGTCGGCGTCCATaGGGGGCTCTGAGCGATGGCCTTCTCCGCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: RLNIPQRRRRRP*GALSDGLLRLQ Trigger: TTGCAAGCGGAGAAGGCCATCGCTCAGAGCCCCCCATGGACGCCGACGCCGACGCTGAGGAATGTTCAGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669429.1 |
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| CDS TCA 72 bp | AGGGGCCACCTTTGCTCAGAGGCTCCGTTAGGCTGGTaGAGCAGGGGGCTACAGTGGGAGGGAGAAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RGHLCSEAPLGW*SRGLQWEGERL Trigger: CAGCCTTTCTCCCTCCCACTGTAGCCCCCTGCTTCACCAGCCTAACGGAGCCTCTGAGCAAAGGTGGCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669429.1 |
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| CDS GCA 72 bp | CAGAGCGAGGGCTGCAGGATGGTCAGCGGCAGCCTCTaGTTTCCTCCACTCCACAGACACTACTCCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: QSEGCRMVSGSL*FPPLHRHYSCL Trigger: GAGACAGGAGTAGTGTCTGTGGAGTGGAGGAAAGCAGAGGCTGCCGCTGACCATCCTGCAGCCCTCGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS GCA 72 bp | CACCTGGTCCCTGACTCCTGGGTCCCTGGGCCTGCCTaGATTGGTTTCTCAGCCCCATCTTGGCTTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: HLVPDSWVPGPA*IGFSAPSWLLS Trigger: AGAGAGAAGCCAAGATGGGGCTGAGAAACCAATGCAGGCAGGCCCAGGGACCCAGGAGTCAGGGACCAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS CAA 72 bp | GGCTCTGAGCGATGGCCTTCTCCGCTTGCAAGGTCATaGGTCTTTGAGCCGGACTCGCTGCCTAAGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: GSERWPSPLARS*VFEPDSLPKAG Trigger: GCCTGCCTTAGGCAGCGAGTCCGGCTCAAAGACCAATGACCTTGCAAGCGGAGAAGGCCATCGCTCAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669429.1 |
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| CDS GCA 72 bp | CACCTCAGACCAACTGATTCCCACCCTACTGTCGCCTaGTTCACTCCACCCCTGTCCACCCTCTGGCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: HLRPTDSHPTVA*FTPPLSTLWPH Trigger: ATGAGGCCAGAGGGTGGACAGGGGTGGAGTGAAGCAGGCGACAGTAGGGTGGGAATCAGTTGGTCTGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659803.1 |
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| CDS GCA 72 bp | GAGGAAGCAGGTGGTGGGGAAGGCCAAGCCACCCCATaGATTCTGCCTGTAATTTGGCAGTGCCGCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: EEAGGGEGQATP*ILPVIWQCRHL Trigger: CAGATGGCGGCACTGCCAAATTACAGGCAGAATGCATGGGGTGGCTTGGCCTTCCCCACCACCTGCTTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659803.1 |
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| CDS CCA 72 bp | GCTCTGAGCGATGGCCTTCTCCGCTTGCAAGGTCATTaGTCTTTGAGCCGGACTCGCTGCCTAAGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: ALSDGLLRLQGH*SLSRTRCLRQA Trigger: AGCCTGCCTTAGGCAGCGAGTCCGGCTCAAAGACCAATGACCTTGCAAGCGGAGAAGGCCATCGCTCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669429.1 |
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| CDS CAA 72 bp | CCATTCTGTTCACCCCCTGTGGCCCTGCTCAAATCCTaGTCAGCTACCCATGCCATGGGCAGCCCCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: PFCSPPVALLKS*SATHAMGSPLL Trigger: GAGCAAGGGGCTGCCCATGGCATGGGTAGCTGACAAGGATTTGAGCAGGGCCACAGGGGGTGAACAGAATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS CAA 90 bp | CACAGCCCTCCTGTGCCCATAGAAGGGAAGCACTTGCTCTGGACCTaGGCATTCTTGAAGGGATGCGTGGTGGGTCTTCCTCCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: HSPPVPIEGKHLLWT*AFLKGCVVGLPPAE Trigger: CTCTGCTGGAGGAAGACCCACCACGCATCCCTTCAAGAATGCCAAGGTCCAGAGCAAGTGCTTCCCTTCTATGGGCACAGGAGGGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS CAA 90 bp | TCTGTGGGCTCCCACAGCCCTCCTGTGCCCATAGAAGGGAAGCACTaGCTCTGGACCTTGGCATTCTTGAAGGGATGCGTGGTGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SVGSHSPPVPIEGKH*LWTLAFLKGCVVGL Trigger: AAGACCCACCACGCATCCCTTCAAGAATGCCAAGGTCCAGAGCAAGTGCTTCCCTTCTATGGGCACAGGAGGGCTGTGGGAGCCCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS CAA 90 bp | CTCCCTCTCTCCATAGCCGCCCCAGACCACCAAGGCCACATCTCATaGCTGACTCCTCCAATCCCCGGCAAGCAGTTCAGTGTCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: LPLSIAAPDHQGHIS*LTPPIPGKQFSVSI Trigger: AATGGAGACACTGAACTGCTTGCCGGGGATTGGAGGAGTCAGCAATGAGATGTGGCCTTGGTGGTCTGGGGCGGCTATGGAGAGAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS TCA 72 bp | CACTCCCAGAGAGAGAAAGAGTTAAGCTGCTCACCCTaGAGGCAAGGGAGAGCCGGCCACGCAGCTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HSQREKELSCSP*RQGRAGHAAVC Trigger: ACACACAGCTGCGTGGCCGGCTCTCCCTTGCCTTCAGGGTGAGCAGCTTAACTCTTTCTCTCTCTGGGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413227.2 |
||
| CDS CAA 72 bp | TCCATAGCCGCCCCAGACCACCAAGGCCACATCTCATaGCTGACTCCTCCAATCCCCGGCAAGCAGTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SIAAPDHQGHIS*LTPPIPGKQFS Trigger: ACTGAACTGCTTGCCGGGGATTGGAGGAGTCAGCAATGAGATGTGGCCTTGGTGGTCTGGGGCGGCTATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS CAA 90 bp | GGGGCTCTGAGCGATGGCCTTCTCCGCTTGCAAGGTCATTGGTCTTaGAGCCGGACTCGCTGCCTAAGGCAGGCTAAGACTGGCATATTA | + |
|
Preference number: 6 (lower is better) Translates to: GALSDGLLRLQGHWS*SRTRCLRQAKTGIL Trigger: TAATATGCCAGTCTTAGCCTGCCTTAGGCAGCGAGTCCGGCTCAAAGACCAATGACCTTGCAAGCGGAGAAGGCCATCGCTCAGAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669429.1 |
||
| CDS TCA 72 bp | TTCCTGCCCTGGAAGTGCTTCGGTCAAGGAATAGTCTaGGGCGGGTATCCAGGCCTGCACGAGTCAGCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: FLPWKCFGQGIV*GGYPGLHESAS Trigger: ACTTGCTGACTCGTGCAGGCCTGGATACCCGCCTCAGACTATTCCTTGACCGAAGCACTTCCAGGGCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
||
| CDS CCA 72 bp | AGCCCTCCTGTGCCCATAGAAGGGAAGCACTTGCTCTaGACCTTGGCATTCTTGAAGGGATGCGTGGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPPVPIEGKHLL*TLAFLKGCVVG Trigger: ACCCACCACGCATCCCTTCAAGAATGCCAAGGTCCAGAGCAAGTGCTTCCCTTCTATGGGCACAGGAGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
||
| CDS CAA 72 bp | AGCGATGGCCTTCTCCGCTTGCAAGGTCATTGGTCTTaGAGCCGGACTCGCTGCCTAAGGCAGGCTAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: SDGLLRLQGHWS*SRTRCLRQAKT Trigger: AGTCTTAGCCTGCCTTAGGCAGCGAGTCCGGCTCAAAGACCAATGACCTTGCAAGCGGAGAAGGCCATCGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669429.1 |
||
| CDS CAA 90 bp | CCTGTGCCCATAGAAGGGAAGCACTTGCTCTGGACCTTGGCATTCTaGAAGGGATGCGTGGTGGGTCTTCCTCCAGCAGAGATGGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PVPIEGKHLLWTLAF*KGCVVGLPPAEMVP Trigger: AGGAACCATCTCTGCTGGAGGAAGACCCACCACGCATCCCTTCAAGAATGCCAAGGTCCAGAGCAAGTGCTTCCCTTCTATGGGCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
||
| CDS TCA 72 bp | CTTCTCTCCTCTGGGATTCCATCACCCCTGATTCCCTaGCCACCTTGGCACCTCAGACCAACTGATTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLSSGIPSPLIP*PPWHLRPTDSH Trigger: GTGGGAATCAGTTGGTCTGAGGTGCCAAGGTGGTCAGGGAATCAGGGGTGATGGAATCCCAGAGGAGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659803.1 |
||
| CDS GCA 72 bp | GTTCAGTGTCTCCATTCTGTTCACCCCCTGTGGCCCTaGTCAAATCCTTGTCAGCTACCCATGCCATGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VQCLHSVHPLWP*SNPCQLPMPWA Trigger: TGCCCATGGCATGGGTAGCTGACAAGGATTTGAGCAGGGCCACAGGGGGTGAACAGAATGGAGACACTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS CCA 72 bp | GAGGCGGGTATCCAGGCCTGCACGAGTCAGCAAGTTTaGCACGCAGGCGCACACCTCCACTTGTTATATAAA | + |
|
Preference number: 6 (lower is better) Translates to: EAGIQACTSQQV*HAGAHLHLLYK Trigger: TTTATATAACAAGTGGAGGTGTGCGCCTGCGTGCCAAACTTGCTGACTCGTGCAGGCCTGGATACCCGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
||
| CDS CCA 72 bp | ATGCGTGGTGGGTCTTCCTCCAGCAGAGATGGTTCCTaGCCTCCTATTCTGGCACAGTTGACTGTGAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: MRGGSSSSRDGS*PPILAQLTVRP Trigger: TGGTCTCACAGTCAACTGTGCCAGAATAGGAGGCCAGGAACCATCTCTGCTGGAGGAAGACCCACCACGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
||
| CDS CAA 90 bp | TGCTTTCCTCTTCCACACATCACTCGCCTTTCAAGCAATTCCCCTTaGCTTCTTGCTCTGAGGAGCAGAGTCTGCCCAGCGTCCAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CFPLPHITRLSSNSP*LLALRSRVCPASRP Trigger: TGGCCTGGACGCTGGGCAGACTCTGCTCCTCAGAGCAAGAAGCAAAGGGGAATTGCTTGAAAGGCGAGTGATGTGTGGAAGAGGAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS GCA 72 bp | CACAATGCCGTTTGCCTCTGCTGTTGGACTGGAGACTaGTGCCCAAGACATTTCATCTCCTGCAGCTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HNAVCLCCWTGD*CPRHFISCSFL Trigger: CAGGAAGCTGCAGGAGATGAAATGTCTTGGGCAGCAGTCTCCAGTCCAACAGCAGAGGCAAACGGCATTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS CCA 72 bp | AAGAGGAGAAGCAAGGCATGTCTTCTCATGGCACCTTaGGAGGAAGCTGCCTGCAGTGACAGAGGACAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KRRSKACLLMAP*EEAACSDRGQS Trigger: ACTCTGTCCTCTGTCACTGCAGGCAGCTTCCTCCCAAGGTGCCATGAGAAGACATGCCTTGCTTCTCCTCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658016.1 ENST00000671178.1 |
||
| CDS CCA 72 bp | CAAGCAGTTCAGTGTCTCCATTCTGTTCACCCCCTGTaGCCCTGCTCAAATCCTTGTCAGCTACCCATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QAVQCLHSVHPL*PCSNPCQLPMP Trigger: TGGCATGGGTAGCTGACAAGGATTTGAGCAGGGCCACAGGGGGTGAACAGAATGGAGACACTGAACTGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS CCA 72 bp | ATGGCTGGGAAGGCCTCAGGAAACTTACAATCCTGGTaGAAGGCAAAGGGAAAGCAAGGCACCTCACCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: MAGKASGNLQSW*KAKGKQGTSPW Trigger: CCAAGGTGAGGTGCCTTGCTTTCCCTTTGCCTTCCACCAGGATTGTAAGTTTCCTGAGGCCTTCCCAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669322.1 |
||
| CDS CAA 72 bp | AGCAGAGATGGTTCCTGGCCTCCTATTCTGGCACAGTaGACTGTGAGACCACGTGCAACTTCCACCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRDGSWPPILAQ*TVRPRATSTFP Trigger: TGGGAAGGTGGAAGTTGCACGTGGTCTCACAGTCAACTGTGCCAGAATAGGAGGCCAGGAACCATCTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
||
| CDS CAA 72 bp | ATAGAAGGGAAGCACTTGCTCTGGACCTTGGCATTCTaGAAGGGATGCGTGGTGGGTCTTCCTCCAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IEGKHLLWTLAF*KGCVVGLPPAE Trigger: CTCTGCTGGAGGAAGACCCACCACGCATCCCTTCAAGAATGCCAAGGTCCAGAGCAAGTGCTTCCCTTCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS CAA 72 bp | CTTCCACACATCACTCGCCTTTCAAGCAATTCCCCTTaGCTTCTTGCTCTGAGGAGCAGAGTCTGCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LPHITRLSSNSP*LLALRSRVCPA Trigger: CGCTGGGCAGACTCTGCTCCTCAGAGCAAGAAGCAAAGGGGAATTGCTTGAAAGGCGAGTGATGTGTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS CAA 90 bp | GGGCAGCCCCTTGCTCCAATGTCTAGACTCATGTGTGCCTCACTCTaGTCCCTTGTCTTAGGCAAATGTCTGATCTGGGGTCTCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GQPLAPMSRLMCASL*SLVLGKCLIWGLSL Trigger: CAGAGAGAGACCCCAGATCAGACATTTGCCTAAGACAAGGGACAAGAGTGAGGCACACATGAGTCTAGACATTGGAGCAAGGGGCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS TCA 72 bp | AAGAGAATGATGCAGGCAGCCGGGTTCGTCTTTCTCTaGGCTGCCATGGGGAAGGTGTGGTCTTTGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KRMMQAAGFVFL*AAMGKVWSLFL Trigger: CAGAAACAAAGACCACACCTTCCCCATGGCAGCTCAGAGAAAGACGAACCCGGCTGCCTGCATCATTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659803.1 |
||
| CDS GCA 72 bp | GCCTCCTATTCTGGCACAGTTGACTGTGAGACCACGTaGAACTTCCACCTTCCCAAGAGCTTCAGTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASYSGTVDCETT*NFHLPKSFSFL Trigger: CAGGAAACTGAAGCTCTTGGGAAGGTGGAAGTTGCACGTGGTCTCACAGTCAACTGTGCCAGAATAGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS GCA 72 bp | CGCTTGCAAGGTCATTGGTCTTTGAGCCGGACTCGCTaGCTAAGGCAGGCTAAGACTGGCATATTAGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: RLQGHWSLSRTR*LRQAKTGILAF Trigger: GAATGCTAATATGCCAGTCTTAGCCTGCCTTAGGCAGCGAGTCCGGCTCAAAGACCAATGACCTTGCAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669429.1 |
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| CDS CCA 72 bp | TGCATGGCTGGGAAGGCCTCAGGAAACTTACAATCCTaGTGGAAGGCAAAGGGAAAGCAAGGCACCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CMAGKASGNLQS*WKAKGKQGTSS Trigger: AGAAGAGGTGCCTTGCTTTCCCTTTGCCTTCCACCAGGATTGTAAGTTTCCTGAGGCCTTCCCAGCCATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659803.1 |
||
| CDS CCA 72 bp | AAACAGCTCACCTTCCCTCTTCCCGTTCTGCATGGCTaGGAAGGCCTCAGGAAACTTACAATCCTGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KQLTFPLPVLHG*EGLRKLTILVE Trigger: TTCCACCAGGATTGTAAGTTTCCTGAGGCCTTCCCAGCCATGCAGAACGGGAAGAGGGAAGGTGAGCTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659803.1 |
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| CDS CCA 72 bp | TTCTGCTCACAATGCCGTTTGCCTCTGCTGTTGGACTaGAGACTGCTGCCCAAGACATTTCATCTCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FCSQCRLPLLLD*RLLPKTFHLLQ Trigger: CTGCAGGAGATGAAATGTCTTGGGCAGCAGTCTCCAGTCCAACAGCAGAGGCAAACGGCATTGTGAGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS CCA 72 bp | CTTCGTTCTGCTCACAATGCCGTTTGCCTCTGCTGTTaGACTGGAGACTGCTGCCCAAGACATTTCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRSAHNAVCLCC*TGDCCPRHFIS Trigger: GGAGATGAAATGTCTTGGGCAGCAGTCTCCAGTCCAACAGCAGAGGCAAACGGCATTGTGAGCAGAACGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS CCA 72 bp | CCAGCCCTGTCTCAGGCCATTTGTCTGTCAGGCCTCTaGATGGTGGAGTTGGTCTCAGTGTTTACTAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: PALSQAICLSGL*MVELVSVFTKQ Trigger: TTGTTTAGTAAACACTGAGACCAACTCCACCATCCAGAGGCCTGACAGACAAATGGCCTGAGACAGGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000417039.6 ENST00000438085.1 ENST00000667944.1 ENST00000669322.1 ENST00000669429.1 ENST00000671178.1 |
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| CDS CAA 72 bp | ACTTCGTTCTGCTCACAATGCCGTTTGCCTCTGCTGTaGGACTGGAGACTGCTGCCCAAGACATTTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSFCSQCRLPLL*DWRLLPKTFHL Trigger: GAGATGAAATGTCTTGGGCAGCAGTCTCCAGTCCAACAGCAGAGGCAAACGGCATTGTGAGCAGAACGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS CCA 72 bp | CCCTGTCTCAGGCCATTTGTCTGTCAGGCCTCTGGATaGTGGAGTTGGTCTCAGTGTTTACTAAACAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: PCLRPFVCQASG*WSWSQCLLNKP Trigger: TGGTTTGTTTAGTAAACACTGAGACCAACTCCACCATCCAGAGGCCTGACAGACAAATGGCCTGAGACAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000417039.6 ENST00000438085.1 ENST00000667944.1 ENST00000669322.1 ENST00000669429.1 ENST00000671178.1 |
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| CDS CCA 72 bp | CAATGTGGTTATCCCATGGAGATCGTTCTGCATGGCTaGGAAGGCCTCAGGAAACTTACAATCCTGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: QCGYPMEIVLHG*EGLRKLTILVE Trigger: TTCCACCAGGATTGTAAGTTTCCTGAGGCCTTCCCAGCCATGCAGAACGATCTCCATGGGATAACCACATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669322.1 |
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| CDS CAA 90 bp | GGCCTGCCTGCATTGGTTTCTCAGCCCCATCTTGGCTTCTCTCTTTaGTCCAAGCTGGTTGAAATGGTTGTTTCACATACTGAAGTGACG | + |
|
Preference number: 6 (lower is better) Translates to: GLPALVSQPHLGFSL*SKLVEMVVSHTEVT Trigger: CGTCACTTCAGTATGTGAAACAACCATTTCAACCAGCTTGGACAAAAGAGAGAAGCCAAGATGGGGCTGAGAAACCAATGCAGGCAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS CCA 72 bp | CATTCTGGAAGCCAGGCTAACAGAACAGCCCCAGTCTaGGACATTGCTTATGTCAGAGGGATAAGAAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: HSGSQANRTAPV*DIAYVRGIRNK Trigger: CTTGTTTCTTATCCCTCTGACATAAGCAATGTCCCAGACTGGGGCTGTTCTGTTAGCCTGGCTTCCAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413227.2 ENST00000421463.6 ENST00000437979.1 |
||
| CDS CAA 72 bp | CTTGCTCCAATGTCTAGACTCATGTGTGCCTCACTCTaGTCCCTTGTCTTAGGCAAATGTCTGATCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LAPMSRLMCASL*SLVLGKCLIWG Trigger: ACCCCAGATCAGACATTTGCCTAAGACAAGGGACAAGAGTGAGGCACACATGAGTCTAGACATTGGAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661472.1 |
||
| CDS TCA 72 bp | ACGTCCCCTTGGTCAAAGCAATCTTGTGGTGAAGCCTaGTTTCATGAGGTGGGATATATCACCTTCCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TSPWSKQSCGEA*FHEVGYITFLQ Trigger: TTGCAGGAAGGTGATATATCCCACCTCATGAAATCAGGCTTCACCACAAGATTGCTTTGACCAAGGGGACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413227.2 ENST00000437979.1 |
||
| CDS TCA 72 bp | ACGTCCCCTTGGTCAAAGCAATCTTGTGGTGAAGCCTaGTTTCATGAGGTGGGATATATCACCTTCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: TSPWSKQSCGEA*FHEVGYITFHL Trigger: AAGGTGGAAGGTGATATATCCCACCTCATGAAATCAGGCTTCACCACAAGATTGCTTTGACCAAGGGGACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421463.6 |
||
| CDS GCA 72 bp | AAACAAACCAATGTGGTTATCCCATGGAGATCGTTCTaGATGGCTGGGAAGGCCTCAGGAAACTTACAATCC | + |
|
Preference number: 6 (lower is better) Translates to: KQTNVVIPWRSF*MAGKASGNLQS Trigger: GGATTGTAAGTTTCCTGAGGCCTTCCCAGCCATGCAGAACGATCTCCATGGGATAACCACATTGGTTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669322.1 |
||
| CDS CCA 72 bp | CAAAGCAATCTTGTGGTGAAGCCTGATTTCATGAGGTaGGATATATCACCTTCCTGCAAAGCCCCTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: QSNLVVKPDFMR*DISPSCKAPDF Trigger: GAAGTCAGGGGCTTTGCAGGAAGGTGATATATCCCACCTCATGAAATCAGGCTTCACCACAAGATTGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413227.2 ENST00000437979.1 |
||
| CDS CCA 72 bp | TGTCTCAGGCCATTTGTCTGTCAGGCCTCTGGATGGTaGAGTTGGTCTCAGTGTTTACTAAACAAACCAATG | + |
|
Preference number: 6 (lower is better) Translates to: CLRPFVCQASGW*SWSQCLLNKPM Trigger: CATTGGTTTGTTTAGTAAACACTGAGACCAACTCCACCATCCAGAGGCCTGACAGACAAATGGCCTGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000417039.6 ENST00000438085.1 ENST00000667944.1 ENST00000669322.1 ENST00000669429.1 ENST00000671178.1 |
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| CDS GCA 72 bp | CCTGCCCCTCCACCCTTGAATACATCCAAATGTCATTaGAAATTTCTGACCTTCAGCAACAAGTCAGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: PAPPPLNTSKCH*KFLTFSNKSVP Trigger: AGGTACTGACTTGTTGCTGAAGGTCAGAAATTTGCAATGACATTTGGATGTATTCAAGGGTGGAGGGGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671178.1 |
||
| CDS CCA 72 bp | TGGAGTTGGTCTCAGTGTTTACTAAACAAACCAATGTaGTTATCCCATGGAGATCACCTTGGGAGGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WSWSQCLLNKPM*LSHGDHLGRKL Trigger: CAGCTTCCTCCCAAGGTGATCTCCATGGGATAACCACATTGGTTTGTTTAGTAAACACTGAGACCAACTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417039.6 |
||
| CDS CCA 72 bp | TGGAGTTGGTCTCAGTGTTTACTAAACAAACCAATGTaGTTATCCCATGGAGATCGTTCTGCATGGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: WSWSQCLLNKPM*LSHGDRSAWLG Trigger: TCCCAGCCATGCAGAACGATCTCCATGGGATAACCACATTGGTTTGTTTAGTAAACACTGAGACCAACTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669322.1 |
||
| CDS CCA 72 bp | CAATGTGGTTATCCCATGGAGATAGTTCTGCATAGCTaGGGAAGCCTCAGGAAACTTACAATCATGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QCGYPMEIVLHS*GSLRKLTIMAE Trigger: TTCTGCCATGATTGTAAGTTTCCTGAGGCTTCCCCAGCTATGCAGAACTATCTCCATGGGATAACCACATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667944.1 |
||
| CDS CCA 72 bp | GAAAAGAGGTTTAATCGACTCACAGTTCTGCATAGCTaGGGAAGCCTCAGGAAACTTACAATCATGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: EKRFNRLTVLHS*GSLRKLTIMAE Trigger: TTCTGCCATGATTGTAAGTTTCCTGAGGCTTCCCCAGCTATGCAGAACTGTGAGTCGATTAAACCTCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658016.1 |
||
| CDS CAA 72 bp | GCATTGGTTTCTCAGCCCCATCTTGGCTTCTCTCTTTaGTCCAAGCTGGTTGAAATGGTTGTTTCACATACT | + |
|
Preference number: 6 (lower is better) Translates to: ALVSQPHLGFSL*SKLVEMVVSHT Trigger: AGTATGTGAAACAACCATTTCAACCAGCTTGGACAAAAGAGAGAAGCCAAGATGGGGCTGAGAAACCAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000661472.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
||
| CDS CCA 72 bp | TGGAGTTGGTCTCAGTGTTTACTAAACAAACCAATGTaGTTATCCCATGGAGATTGGGTAGAAACTGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: WSWSQCLLNKPM*LSHGDWVETVA Trigger: TGCTACAGTTTCTACCCAATCTCCATGGGATAACCACATTGGTTTGTTTAGTAAACACTGAGACCAACTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438085.1 |
||
| CDS CCA 72 bp | GGCCTTGAAGCTTTCCCTAAATGTCTCCTTCTGGATTaGTTTGGCAAACATTATCTAAGTATCCGTCATATG | + |
|
Preference number: 6 (lower is better) Translates to: GLEAFPKCLLLD*FGKHYLSIRHM Trigger: CATATGACGGATACTTAGATAATGTTTGCCAAACCAATCCAGAAGGAGACATTTAGGGAAAGCTTCAAGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659803.1 |
||
| CDS CAA 90 bp | TATATAAACTGTTTGTGTAAGTTCATACTTGACTTGGAGCCACAGTaGTCTGTAAAAGGTATAACTGCCCTGTTAACACTGCGCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YINCLCKFILDLEPQ*SVKGITALLTLRTR Trigger: TCTGGTGCGCAGTGTTAACAGGGCAGTTATACCTTTTACAGACAACTGTGGCTCCAAGTCAAGTATGAACTTACACAAACAGTTTATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
||
| CDS TCA 72 bp | AAACCACAGAACCTAACTACATACGCATTCTTGCTTTaGATGATTACTTCGTTCTGCTCACAATGCCGTTTG | + |
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Preference number: 6 (lower is better) Translates to: KPQNLTTYAFLL*MITSFCSQCRL Trigger: CAAACGGCATTGTGAGCAGAACGAAGTAATCATTCAAAGCAAGAATGCGTATGTAGTTAGGTTCTGTGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS CAA 72 bp | TGTTTGTGTAAGTTCATACTTGACTTGGAGCCACAGTaGTCTGTAAAAGGTATAACTGCCCTGTTAACACTG | + |
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Preference number: 6 (lower is better) Translates to: CLCKFILDLEPQ*SVKGITALLTL Trigger: CAGTGTTAACAGGGCAGTTATACCTTTTACAGACAACTGTGGCTCCAAGTCAAGTATGAACTTACACAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS CAA 72 bp | AAAACCACAGAACCTAACTACATACGCATTCTTGCTTaGAATGATTACTTCGTTCTGCTCACAATGCCGTTT | + |
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Preference number: 6 (lower is better) Translates to: KTTEPNYIRILA*NDYFVLLTMPF Trigger: AAACGGCATTGTGAGCAGAACGAAGTAATCATTCAAAGCAAGAATGCGTATGTAGTTAGGTTCTGTGGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661472.1 |
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| CDS CAA 90 bp | ACCTCCACTTGTTATATAAACTGTTTGTGTAAGTTCATACTTGACTaGGAGCCACAGTTGTCTGTAAAAGGTATAACTGCCCTGTTAACA | + |
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Preference number: 6 (lower is better) Translates to: TSTCYINCLCKFILD*EPQLSVKGITALLT Trigger: TGTTAACAGGGCAGTTATACCTTTTACAGACAACTGTGGCTCCAAGTCAAGTATGAACTTACACAAACAGTTTATATAACAAGTGGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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| CDS CAA 72 bp | TGTTATATAAACTGTTTGTGTAAGTTCATACTTGACTaGGAGCCACAGTTGTCTGTAAAAGGTATAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: CYINCLCKFILD*EPQLSVKGITA Trigger: GGCAGTTATACCTTTTACAGACAACTGTGGCTCCAAGTCAAGTATGAACTTACACAAACAGTTTATATAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000413227.2 ENST00000417039.6 ENST00000421463.6 ENST00000658016.1 ENST00000667944.1 ENST00000669322.1 ENST00000671178.1 |
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