Pregenerated sensors for LINC02612 (Homo sapiens)
Ensembl gene IDs: ENSG00000224048Ensembl transcript IDs: ENST00000413247.5, ENST00000423428.2, ENST00000427615.5, ENST00000440668.5, ENST00000443811.2, ENST00000652947.1, ENST00000653799.1, ENST00000655103.1, ENST00000655327.1, ENST00000657466.1, ENST00000660328.1, ENST00000661012.1, ENST00000665320.1, ENST00000665399.1, ENST00000665656.1, ENST00000666939.1, ENST00000667037.1, ENST00000667235.1, ENST00000667502.1, ENST00000670597.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTTACATGGATCGTTTTGTGGCAGGCAGCACTGAGATTTAACCTCTaGTCTCTAAAGCTGAGGCCAATACCCATCACCTGCATCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: LTWIVLWQAALRFNL*SLKLRPIPITCICL Trigger: CAGGCAGATGCAGGTGATGGGTATTGGCCTCAGCTTTAGAGACCAGAGGTTAAATCTCAGTGCTGCCTGCCACAAAACGATCCATGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443811.2 ENST00000652947.1 ENST00000657466.1 |
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| CDS CCA 90 bp | CTTACATGGATCGTTTTGTGGCAGGCAGCACTGAGATTTAACCTCTaGTCTCTAAAGCTGAGGCCAATACCCATCACCTGCATCCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LTWIVLWQAALRFNL*SLKLRPIPITCILC Trigger: GCACAGGATGCAGGTGATGGGTATTGGCCTCAGCTTTAGAGACCAGAGGTTAAATCTCAGTGCTGCCTGCCACAAAACGATCCATGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655327.1 ENST00000666939.1 |
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| CDS TCA 90 bp | TTAAACCTTCCAAGAGTGGAGGAATGTGAGGGAGTAGAGTATAAGTaGAGACATTTTCTGTTCTCTGGGCCCAAGGAGGACAGGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LNLPRVEECEGVEYK*RHFLFSGPKEDRGP Trigger: AGGCCCCCTGTCCTCCTTGGGCCCAGAGAACAGAAAATGTCTTCACTTATACTCTACTCCCTCACATTCCTCCACTCTTGGAAGGTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655103.1 ENST00000666939.1 |
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| CDS CCA 90 bp | CTTACATGGATCGTTTTGTGGCAGGCAGCACTGAGATTTAACCTCTaGTCTCTAAAGCTGAGGCCAATACCCATCACCTGCATCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LTWIVLWQAALRFNL*SLKLRPIPITCILL Trigger: AAGCAGGATGCAGGTGATGGGTATTGGCCTCAGCTTTAGAGACCAGAGGTTAAATCTCAGTGCTGCCTGCCACAAAACGATCCATGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000413247.5 ENST00000427615.5 ENST00000655103.1 ENST00000660328.1 ENST00000661012.1 ENST00000665320.1 ENST00000665399.1 ENST00000665656.1 ENST00000667037.1 ENST00000667235.1 ENST00000667502.1 ENST00000670597.1 |
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| CDS TCA 90 bp | CACAGGAAATGCTTCCCATGTTTTTGGGAAAGACCTGCCAGACAGTaGTTGAAAGGTCAACCTAATCTTCCTGGTAACCCTTCCAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: HRKCFPCFWERPARQ*LKGQPNLPGNPSKG Trigger: CCCCTTGGAAGGGTTACCAGGAAGATTAGGTTGACCTTTCAATCACTGTCTGGCAGGTCTTTCCCAAAAACATGGGAAGCATTTCCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653799.1 ENST00000655327.1 |
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| CDS GCA 90 bp | CCTCCTGCATTGATCTCCTTGGCCTCACATCAGAAGTGTCAGCAATaGCAGCATCCAGCATCTTTCATCTGGGAGAAAAGTACTCATACA | + |
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Preference number: 5 (lower is better) Translates to: PPALISLASHQKCQQ*QHPASFIWEKSTHT Trigger: TGTATGAGTACTTTTCTCCCAGATGAAAGATGCTGGATGCTGGCATTGCTGACACTTCTGATGTGAGGCCAAGGAGATCAATGCAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665399.1 |
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| CDS TCA 90 bp | GGAAATGCTTCCCATGTTTTTGGGAAAGACCTGCCAGACAGTGATTaGAAGGTCAACCTAATCTTCCTGGTAACCCTTCCAAGGGGACTT | + |
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Preference number: 5 (lower is better) Translates to: GNASHVFGKDLPDSD*KVNLIFLVTLPRGL Trigger: AAGTCCCCTTGGAAGGGTTACCAGGAAGATTAGGTTGACCTTTCAATCACTGTCTGGCAGGTCTTTCCCAAAAACATGGGAAGCATTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000653799.1 ENST00000655327.1 |
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| CDS TCA 90 bp | TCTCTGATCAGCAATAGGTCATTCTGCACAGGATTTCGGAGCTCATaGAAGATGTCCACTGGTCAGTTCATCATAGTGTCTGCGTGTACT | + |
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Preference number: 5 (lower is better) Translates to: SLISNRSFCTGFRSS*KMSTGQFIIVSACT Trigger: AGTACACGCAGACACTATGATGAACTGACCAGTGGACATCTTTCATGAGCTCCGAAATCCTGTGCAGAATGACCTATTGCTGATCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655327.1 |
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| CDS CCA 90 bp | AGAAAGTACATGGACTCCAGACCAGACAAACTTGGATCCAAATCCTaGTTCTACCATATAAGAGCTCTCAGGGCCTCATCTCTCCATTTA | + |
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Preference number: 5 (lower is better) Translates to: RKYMDSRPDKLGSKS*FYHIRALRASSLHL Trigger: TAAATGGAGAGATGAGGCCCTGAGAGCTCTTATATGGTAGAACCAGGATTTGGATCCAAGTTTGTCTGGTCTGGAGTCCATGTACTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440668.5 |
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| CDS CCA 90 bp | ATCTGCTTCGATCTTGTCTATATCTCCAGATATCAACACAGCACTTaGAATGTGATAGGAGTTCCACAGCATCTTCAGCTGCATTCATCC | + |
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Preference number: 5 (lower is better) Translates to: ICFDLVYISRYQHST*NVIGVPQHLQLHSS Trigger: GGATGAATGCAGCTGAAGATGCTGTGGAACTCCTATCACATTCCAAGTGCTGTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 20 transcripts: ENST00000413247.5 ENST00000423428.2 ENST00000427615.5 ENST00000440668.5 ENST00000443811.2 ENST00000652947.1 ENST00000653799.1 ENST00000655103.1 ENST00000655327.1 ENST00000657466.1 ENST00000660328.1 ENST00000661012.1 ENST00000665320.1 ENST00000665399.1 ENST00000665656.1 ENST00000666939.1 ENST00000667037.1 ENST00000667235.1 ENST00000667502.1 ENST00000670597.1 |
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| CDS CCA 90 bp | CTGCAGATTCTGGTGGTCATGCCAGGGTTAGTTGCTAGAAGTTCTTaGTTACCAAAAAGTCCAGAGAATAATTGTCAATCCACTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LQILVVMPGLVARSS*LPKSPENNCQSTLQ Trigger: CTGAAGAGTGGATTGACAATTATTCTCTGGACTTTTTGGTAACCAAGAACTTCTAGCAACTAACCCTGGCATGACCACCAGAATCTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000440668.5 |
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| CDS CCA 90 bp | TTCCAAGGGGACTTTGGTACTGTTGATAAATACATGCTCCACAGATaGCAGCATTTTATCTTCCAGAAACCTCCTCCTCTGGATAGCAAT | + |
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Preference number: 5 (lower is better) Translates to: FQGDFGTVDKYMLHR*QHFIFQKPPPLDSN Trigger: ATTGCTATCCAGAGGAGGAGGTTTCTGGAAGATAAAATGCTGCCATCTGTGGAGCATGTATTTATCAACAGTACCAAAGTCCCCTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653799.1 ENST00000655327.1 |
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| CDS TCA 90 bp | AGGCCAATACCCATCACCTGCATCTGCCTGATTCAAATATTCATGTaGAAGACTGCATCTGCTTCGATCTTGTCTATATCTCCAGATATC | + |
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Preference number: 5 (lower is better) Translates to: RPIPITCICLIQIFM*KTASASILSISPDI Trigger: GATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCAGATGCAGGTGATGGGTATTGGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443811.2 ENST00000652947.1 ENST00000657466.1 |
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| CDS TCA 90 bp | CCAATACCCATCACCTGCATCCTGTGCCTGATTCAAATATTCATGTaGAAGACTGCATCTGCTTCGATCTTGTCTATATCTCCAGATATC | + |
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Preference number: 5 (lower is better) Translates to: PIPITCILCLIQIFM*KTASASILSISPDI Trigger: GATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCACAGGATGCAGGTGATGGGTATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655327.1 ENST00000666939.1 |
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| CDS GCA 90 bp | CACCTGCATCTGCCTGATTCAAATATTCATGTGAAAGACTGCATCTaGTTCGATCTTGTCTATATCTCCAGATATCAACACAGCACTTGG | + |
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Preference number: 5 (lower is better) Translates to: HLHLPDSNIHVKDCI*FDLVYISRYQHSTW Trigger: CCAAGTGCTGTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCAGATGCAGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443811.2 ENST00000652947.1 ENST00000657466.1 |
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| CDS GCA 90 bp | ACCCATCACCTGCATCTGCCTGATTCAAATATTCATGTGAAAGACTaGATCTGCTTCGATCTTGTCTATATCTCCAGATATCAACACAGC | + |
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Preference number: 5 (lower is better) Translates to: THHLHLPDSNIHVKD*ICFDLVYISRYQHS Trigger: GCTGTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCAGATGCAGGTGATGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443811.2 ENST00000652947.1 ENST00000657466.1 |
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| CDS GCA 90 bp | CTGCATCCTGTGCCTGATTCAAATATTCATGTGAAAGACTGCATCTaGTTCGATCTTGTCTATATCTCCAGATATCAACACAGCACTTGG | + |
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Preference number: 5 (lower is better) Translates to: LHPVPDSNIHVKDCI*FDLVYISRYQHSTW Trigger: CCAAGTGCTGTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCACAGGATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655327.1 ENST00000666939.1 |
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| CDS GCA 90 bp | CATCACCTGCATCCTGTGCCTGATTCAAATATTCATGTGAAAGACTaGATCTGCTTCGATCTTGTCTATATCTCCAGATATCAACACAGC | + |
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Preference number: 5 (lower is better) Translates to: HHLHPVPDSNIHVKD*ICFDLVYISRYQHS Trigger: GCTGTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCACAGGATGCAGGTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655327.1 ENST00000666939.1 |
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| CDS CCA 90 bp | CTGCAGATTCTGGTGGTCATGCCAGGGTTAGTTGCTAGAAGTTCTTaGTTACCAAAAAGTCCAGAGAATAATTGTCAATCCACTCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LQILVVMPGLVARSS*LPKSPENNCQSTLF Trigger: AAACAGAGTGGATTGACAATTATTCTCTGGACTTTTTGGTAACCAAGAACTTCTAGCAACTAACCCTGGCATGACCACCAGAATCTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000413247.5 ENST00000655103.1 ENST00000657466.1 ENST00000665656.1 |
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| CDS CCA 90 bp | CTGCAGATTCTGGTGGTCATGCCAGGGTTAGTTGCTAGAAGTTCTTaGTTACCAAAAAGTCCAGAGAATAATTGTCAATCCACTCATACA | + |
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Preference number: 5 (lower is better) Translates to: LQILVVMPGLVARSS*LPKSPENNCQSTHT Trigger: TGTATGAGTGGATTGACAATTATTCTCTGGACTTTTTGGTAACCAAGAACTTCTAGCAACTAACCCTGGCATGACCACCAGAATCTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423428.2 |
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| CDS CCA 90 bp | CTGCAGATTCTGGTGGTCATGCCAGGGTTAGTTGCTAGAAGTTCTTaGTTACCAAAAAGTCCAGAGAATAATTGTCAATCCACTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: LQILVVMPGLVARSS*LPKSPENNCQSTLI Trigger: TATGAGAGTGGATTGACAATTATTCTCTGGACTTTTTGGTAACCAAGAACTTCTAGCAACTAACCCTGGCATGACCACCAGAATCTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000443811.2 ENST00000660328.1 |
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| CDS CCA 90 bp | CTGCAGATTCTGGTGGTCATGCCAGGGTTAGTTGCTAGAAGTTCTTaGTTACCAAAAAGTCCAGAGAATAATTGTCAATCCACTCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LQILVVMPGLVARSS*LPKSPENNCQSTLE Trigger: TTCTAGAGTGGATTGACAATTATTCTCTGGACTTTTTGGTAACCAAGAACTTCTAGCAACTAACCCTGGCATGACCACCAGAATCTGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000653799.1 ENST00000655327.1 ENST00000665399.1 ENST00000667037.1 |
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| CDS GCA 90 bp | GGGAACATACTGCCTGATTCAAATATTCATGTGAAAGACTGCATCTaGTTCGATCTTGTCTATATCTCCAGATATCAACACAGCACTTGG | + |
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Preference number: 5 (lower is better) Translates to: GNILPDSNIHVKDCI*FDLVYISRYQHSTW Trigger: CCAAGTGCTGTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCAGTATGTTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000423428.2 ENST00000440668.5 ENST00000653799.1 ENST00000655103.1 ENST00000660328.1 ENST00000661012.1 ENST00000665320.1 ENST00000665399.1 ENST00000665656.1 ENST00000667037.1 ENST00000667235.1 ENST00000667502.1 ENST00000670597.1 |
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| CDS CCA 90 bp | CTGCAGATTCTGGTGGTCATGCCAGGGTTAGTTGCTAGAAGTTCTTaGTTACCAAAAAGTCCAGAGAATAATTGTCAATCCACTCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: LQILVVMPGLVARSS*LPKSPENNCQSTLK Trigger: TTTAAGAGTGGATTGACAATTATTCTCTGGACTTTTTGGTAACCAAGAACTTCTAGCAACTAACCCTGGCATGACCACCAGAATCTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000427615.5 ENST00000652947.1 ENST00000667235.1 |
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| CDS CCA 90 bp | TCACATCAGAAGTGTCAGCAATGCCAGCATCCAGCATCTTTCATCTaGGAGAAAAGTACTCATACAACAAGAATTGTAGAGTCTAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: SHQKCQQCQHPASFI*EKSTHTTRIVESRS Trigger: ACTTCTAGACTCTACAATTCTTGTTGTATGAGTACTTTTCTCCCAGATGAAAGATGCTGGATGCTGGCATTGCTGACACTTCTGATGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665399.1 |
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| CDS CCA 90 bp | CTGCAGATTCTGGTGGTCATGCCAGGGTTAGTTGCTAGAAGTTCTTaGTTACCAAAAAGTCCAGAGAATAATTGTCAATCCACTGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: LQILVVMPGLVARSS*LPKSPENNCQSTVL Trigger: TAAAACAGTGGATTGACAATTATTCTCTGGACTTTTTGGTAACCAAGAACTTCTAGCAACTAACCCTGGCATGACCACCAGAATCTGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667502.1 |
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| CDS GCA 90 bp | TTTAGAGGTGGACAGGGCATTAGAAACCATTTAGTTCAATTCATTTaGCTCTCACATGGTAACGAAAAGCAGGCAAATTTTTGTGACAGG | + |
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Preference number: 5 (lower is better) Translates to: FRGGQGIRNHLVQFI*LSHGNEKQANFCDR Trigger: CCTGTCACAAAAATTTGCCTGCTTTTCGTTACCATGTGAGAGGCAAATGAATTGAACTAAATGGTTTCTAATGCCCTGTCCACCTCTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000660328.1 ENST00000665320.1 ENST00000665399.1 ENST00000667235.1 |
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| CDS GCA 90 bp | ATTCCATTAATGCCTGATTCAAATATTCATGTGAAAGACTGCATCTaGTTCGATCTTGTCTATATCTCCAGATATCAACACAGCACTTGG | + |
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Preference number: 5 (lower is better) Translates to: IPLMPDSNIHVKDCI*FDLVYISRYQHSTW Trigger: CCAAGTGCTGTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCATTAATGGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413247.5 ENST00000427615.5 |
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| CDS CCA 90 bp | GGCTCAGAGAGTTTGATCATTCATCAAAATCCCAGAGATACTGAGTaGCAGAGTATGGATATGAATCCACACAATATGAATACTAAATAC | + |
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Preference number: 5 (lower is better) Translates to: GSESLIIHQNPRDTE*QSMDMNPHNMNTKY Trigger: GTATTTAGTATTCATATTGTGTGGATTCATATCCATACTCTGCCACTCAGTATCTCTGGGATTTTGATGAATGATCAAACTCTCTGAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000440668.5 ENST00000655103.1 ENST00000660328.1 ENST00000661012.1 ENST00000665320.1 ENST00000665399.1 ENST00000665656.1 ENST00000667037.1 ENST00000667235.1 ENST00000667502.1 ENST00000670597.1 |
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| CDS CCA 90 bp | GTCAATCCACTCTTAAATTTCTTTGTTAGCTCCGTTAAGCAGGAATaGCCAAGTATGAAACCAGAATTTTATGTAGTAGATGATTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: VNPLLNFFVSSVKQE*PSMKPEFYVVDDFS Trigger: TGAGAAATCATCTACTACATAAAATTCTGGTTTCATACTTGGCCATTCCTGCTTAACGGAGCTAACAAAGAAATTTAAGAGTGGATTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000427615.5 ENST00000652947.1 ENST00000667235.1 |
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| CDS CCA 72 bp | CTCTCCTATAGGGCCCCAGGTTCAGCAGGTCCTGCTTaGGTGCTAATGCTCTGTGGTCACTGTATTGAAATT | + |
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Preference number: 6 (lower is better) Translates to: LSYRAPGSAGPA*VLMLCGHCIEI Trigger: AATTTCAATACAGTGACCACAGAGCATTAGCACCCAAGCAGGACCTGCTGAACCTGGGGCCCTATAGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655103.1 ENST00000660328.1 |
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| CDS CAA 72 bp | CCCCTGTTTAAGAGGTCTCCTCCTGCATTGATCTCCTaGGCCTCACATCAGAAGTGTCAGCAATGCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: PLFKRSPPALIS*ASHQKCQQCQH Trigger: ATGCTGGCATTGCTGACACTTCTGATGTGAGGCCAAGGAGATCAATGCAGGAGGAGACCTCTTAAACAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653799.1 ENST00000655327.1 ENST00000665399.1 ENST00000667037.1 |
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| CDS CAA 72 bp | GGTAGCGGGCCAATGGATGAATGTGGTAGGCCATTCTaGATAAAGCCCCTGTTTAAGAGGTCTCCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GSGPMDECGRPF*IKPLFKRSPPA Trigger: TGCAGGAGGAGACCTCTTAAACAGGGGCTTTATCAAGAATGGCCTACCACATTCATCCATTGGCCCGCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653799.1 ENST00000655327.1 ENST00000665399.1 ENST00000667037.1 |
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| CDS CCA 72 bp | ATCGTTTTGTGGCAGGCAGCACTGAGATTTAACCTCTaGTCTCTAAAGCTGAGGCCAATACCCATCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: IVLWQAALRFNL*SLKLRPIPITC Trigger: GCAGGTGATGGGTATTGGCCTCAGCTTTAGAGACCAGAGGTTAAATCTCAGTGCTGCCTGCCACAAAACGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000413247.5 ENST00000427615.5 ENST00000443811.2 ENST00000652947.1 ENST00000655103.1 ENST00000655327.1 ENST00000657466.1 ENST00000660328.1 ENST00000661012.1 ENST00000665320.1 ENST00000665399.1 ENST00000665656.1 ENST00000666939.1 ENST00000667037.1 ENST00000667235.1 ENST00000667502.1 ENST00000670597.1 |
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| CDS CAA 90 bp | TTGATAAAGCCCCTGTTTAAGAGGTCTCCTCCTGCATTGATCTCCTaGGCCTCACATCAGAAGTGTCAGCAATGCCAGCATCCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: LIKPLFKRSPPALIS*ASHQKCQQCQHPAS Trigger: AGATGCTGGATGCTGGCATTGCTGACACTTCTGATGTGAGGCCAAGGAGATCAATGCAGGAGGAGACCTCTTAAACAGGGGCTTTATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653799.1 ENST00000655327.1 ENST00000665399.1 ENST00000667037.1 |
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| CDS CAA 90 bp | AGGCCATTCTTGATAAAGCCCCTGTTTAAGAGGTCTCCTCCTGCATaGATCTCCTTGGCCTCACATCAGAAGTGTCAGCAATGCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: RPFLIKPLFKRSPPA*ISLASHQKCQQCQH Trigger: ATGCTGGCATTGCTGACACTTCTGATGTGAGGCCAAGGAGATCAATGCAGGAGGAGACCTCTTAAACAGGGGCTTTATCAAGAATGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653799.1 ENST00000655327.1 ENST00000665399.1 ENST00000667037.1 |
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| CDS CAA 90 bp | ATCAAAGATGGTAGCGGGCCAATGGATGAATGTGGTAGGCCATTCTaGATAAAGCCCCTGTTTAAGAGGTCTCCTCCTGCATTGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: IKDGSGPMDECGRPF*IKPLFKRSPPALIS Trigger: GGAGATCAATGCAGGAGGAGACCTCTTAAACAGGGGCTTTATCAAGAATGGCCTACCACATTCATCCATTGGCCCGCTACCATCTTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653799.1 ENST00000655327.1 ENST00000665399.1 ENST00000667037.1 |
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| CDS GCA 72 bp | TTGATCTCCTTGGCCTCACATCAGAAGTGTCAGCAATaGCAGCATCCAGCATCTTTCATCTGGGAGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: LISLASHQKCQQ*QHPASFIWEKS Trigger: ACTTTTCTCCCAGATGAAAGATGCTGGATGCTGGCATTGCTGACACTTCTGATGTGAGGCCAAGGAGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653799.1 ENST00000655327.1 ENST00000665399.1 ENST00000667037.1 |
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| CDS CCA 72 bp | CTGCACAGGATTTCGGAGCTCATGAAAGATGTCCACTaGTCAGTTCATCATAGTGTCTGCGTGTACTCCATT | + |
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Preference number: 6 (lower is better) Translates to: LHRISELMKDVH*SVHHSVCVYSI Trigger: AATGGAGTACACGCAGACACTATGATGAACTGACCAGTGGACATCTTTCATGAGCTCCGAAATCCTGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655327.1 |
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| CDS CAA 72 bp | TTGATAAAGCCCCTGTTTAAGAGGTCTCCTCCTGCATaGATCTCCTTGGCCTCACATCAGAAGTGTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LIKPLFKRSPPA*ISLASHQKCQQ Trigger: TTGCTGACACTTCTGATGTGAGGCCAAGGAGATCAATGCAGGAGGAGACCTCTTAAACAGGGGCTTTATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653799.1 ENST00000655327.1 ENST00000665399.1 ENST00000667037.1 |
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| CDS TCA 72 bp | TCCCATGTTTTTGGGAAAGACCTGCCAGACAGTGATTaGAAGGTCAACCTAATCTTCCTGGTAACCCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SHVFGKDLPDSD*KVNLIFLVTLP Trigger: TGGAAGGGTTACCAGGAAGATTAGGTTGACCTTTCAATCACTGTCTGGCAGGTCTTTCCCAAAAACATGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653799.1 ENST00000655327.1 |
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| CDS TCA 72 bp | TGCTTCCCATGTTTTTGGGAAAGACCTGCCAGACAGTaGTTGAAAGGTCAACCTAATCTTCCTGGTAACCCT | + |
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Preference number: 6 (lower is better) Translates to: CFPCFWERPARQ*LKGQPNLPGNP Trigger: AGGGTTACCAGGAAGATTAGGTTGACCTTTCAATCACTGTCTGGCAGGTCTTTCCCAAAAACATGGGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653799.1 ENST00000655327.1 |
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| CDS GCA 72 bp | GCCAGAGTTGACTTCACCAACCTGAAAACCTTCTACTaGCCTGTTTTAATTTGTACAAGAAGCTCTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ARVDFTNLKTFY*PVLICTRSSVG Trigger: TCCCACAGAGCTTCTTGTACAAATTAAAACAGGGCAGTAGAAGGTTTTCAGGTTGGTGAAGTCAACTCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000660328.1 ENST00000665320.1 ENST00000665399.1 ENST00000667235.1 |
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| CDS CAA 72 bp | TCTTGCTTCATGACACAGGAAATGCTTCCCATGTTTTaGGGAAAGACCTGCCAGACAGTGATTGAAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SCFMTQEMLPMF*GKTCQTVIERS Trigger: TGACCTTTCAATCACTGTCTGGCAGGTCTTTCCCAAAAACATGGGAAGCATTTCCTGTGTCATGAAGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653799.1 ENST00000655327.1 |
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| CDS CCA 72 bp | CTGGTGGTCATGCCAGGGTTAGTTGCTAGAAGTTCTTaGTTACCAAAAAGTCCAGAGAATAATTGTCAATCC | + |
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Preference number: 6 (lower is better) Translates to: LVVMPGLVARSS*LPKSPENNCQS Trigger: GGATTGACAATTATTCTCTGGACTTTTTGGTAACCAAGAACTTCTAGCAACTAACCCTGGCATGACCACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 16 transcripts: ENST00000413247.5 ENST00000423428.2 ENST00000427615.5 ENST00000440668.5 ENST00000443811.2 ENST00000652947.1 ENST00000653799.1 ENST00000655103.1 ENST00000655327.1 ENST00000657466.1 ENST00000660328.1 ENST00000665399.1 ENST00000665656.1 ENST00000667037.1 ENST00000667235.1 ENST00000667502.1 |
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| CDS CCA 72 bp | GACTTTGGTACTGTTGATAAATACATGCTCCACAGATaGCAGCATTTTATCTTCCAGAAACCTCCTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: DFGTVDKYMLHR*QHFIFQKPPPL Trigger: CAGAGGAGGAGGTTTCTGGAAGATAAAATGCTGCCATCTGTGGAGCATGTATTTATCAACAGTACCAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653799.1 ENST00000655327.1 |
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| CDS TCA 72 bp | CCCATCACCTGCATCTGCCTGATTCAAATATTCATGTaGAAGACTGCATCTGCTTCGATCTTGTCTATATCT | + |
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Preference number: 6 (lower is better) Translates to: PITCICLIQIFM*KTASASILSIS Trigger: AGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCAGATGCAGGTGATGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443811.2 ENST00000652947.1 ENST00000657466.1 |
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| CDS TCA 72 bp | ATCACCTGCATCCTGTGCCTGATTCAAATATTCATGTaGAAGACTGCATCTGCTTCGATCTTGTCTATATCT | + |
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Preference number: 6 (lower is better) Translates to: ITCILCLIQIFM*KTASASILSIS Trigger: AGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCACAGGATGCAGGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655327.1 ENST00000666939.1 |
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| CDS CAA 72 bp | TTGGCTGAAGGTCCTATTAGCCTTCACTTGAACATTTaGGCAGGGTTTCTTCTTCCCATTTTGGAAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: LAEGPISLHLNI*AGFLLPILENL Trigger: AAGATTTTCCAAAATGGGAAGAAGAAACCCTGCCAAAATGTTCAAGTGAAGGCTAATAGGACCTTCAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653799.1 ENST00000655327.1 |
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| CDS GCA 72 bp | CTGCCTGATTCAAATATTCATGTGAAAGACTGCATCTaGTTCGATCTTGTCTATATCTCCAGATATCAACAC | + |
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Preference number: 6 (lower is better) Translates to: LPDSNIHVKDCI*FDLVYISRYQH Trigger: GTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000423428.2 ENST00000440668.5 ENST00000443811.2 ENST00000652947.1 ENST00000653799.1 ENST00000655103.1 ENST00000657466.1 ENST00000660328.1 ENST00000661012.1 ENST00000665320.1 ENST00000665399.1 ENST00000665656.1 ENST00000667037.1 ENST00000667235.1 ENST00000667502.1 ENST00000670597.1 |
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| CDS GCA 72 bp | CTGCATCTGCCTGATTCAAATATTCATGTGAAAGACTaGATCTGCTTCGATCTTGTCTATATCTCCAGATAT | + |
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Preference number: 6 (lower is better) Translates to: LHLPDSNIHVKD*ICFDLVYISRY Trigger: ATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCAGATGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443811.2 ENST00000652947.1 ENST00000657466.1 |
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| CDS GCA 72 bp | GTGCCTGATTCAAATATTCATGTGAAAGACTGCATCTaGTTCGATCTTGTCTATATCTCCAGATATCAACAC | + |
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Preference number: 6 (lower is better) Translates to: VPDSNIHVKDCI*FDLVYISRYQH Trigger: GTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655327.1 ENST00000666939.1 |
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| CDS GCA 72 bp | CATCCTGTGCCTGATTCAAATATTCATGTGAAAGACTaGATCTGCTTCGATCTTGTCTATATCTCCAGATAT | + |
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Preference number: 6 (lower is better) Translates to: HPVPDSNIHVKD*ICFDLVYISRY Trigger: ATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCACAGGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655327.1 ENST00000666939.1 |
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| CDS CCA 72 bp | AACGAAAAGCAGGCAAATTTTTGTGACAGGGAAGAATaGACAATTGAGAGGGATCCACACACTATATCTTTA | + |
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Preference number: 6 (lower is better) Translates to: NEKQANFCDREE*TIERDPHTISL Trigger: TAAAGATATAGTGTGTGGATCCCTCTCAATTGTCCATTCTTCCCTGTCACAAAAATTTGCCTGCTTTTCGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000660328.1 ENST00000665320.1 ENST00000665399.1 ENST00000667235.1 |
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| CDS TCA 72 bp | AGAGAGTTTGATCATTCATCAAAATCCCAGAGATACTaGGTGGCAGAGTATGGATATGAATCCACACAATAT | + |
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Preference number: 6 (lower is better) Translates to: REFDHSSKSQRY*VAEYGYESTQY Trigger: ATATTGTGTGGATTCATATCCATACTCTGCCACTCAGTATCTCTGGGATTTTGATGAATGATCAAACTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000440668.5 ENST00000655103.1 ENST00000660328.1 ENST00000661012.1 ENST00000665320.1 ENST00000665399.1 ENST00000665656.1 ENST00000667037.1 ENST00000667235.1 ENST00000667502.1 ENST00000670597.1 |
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| CDS GCA 72 bp | ATGCCTGATTCAAATATTCATGTGAAAGACTGCATCTaGTTCGATCTTGTCTATATCTCCAGATATCAACAC | + |
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Preference number: 6 (lower is better) Translates to: MPDSNIHVKDCI*FDLVYISRYQH Trigger: GTGTTGATATCTGGAGATATAGACAAGATCGAAGCAGATGCAGTCTTTCACATGAATATTTGAATCAGGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413247.5 ENST00000427615.5 |
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