Pregenerated sensors for LINC02607 (Homo sapiens)
Ensembl gene IDs: ENSG00000228971Ensembl transcript IDs: ENST00000411798.2, ENST00000440116.2, ENST00000456933.1, ENST00000653589.1, ENST00000654040.1, ENST00000655217.1, ENST00000656764.1, ENST00000664663.1, ENST00000664740.1, ENST00000665349.1, ENST00000667517.1, ENST00000669804.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTGGCAGATGAAGGATGCAGTCGTGTGTATCAGGAAACCCAATTCTaGGATGTATCCACTTCCCCTCATGGGGCTTCGAGACTTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LADEGCSRVYQETQF*DVSTSPHGASRLGS Trigger: GGAGCCAAGTCTCGAAGCCCCATGAGGGGAAGTGGATACATCTCAGAATTGGGTTTCCTGATACACACGACTGCATCCTTCATCTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456933.1 |
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| CDS GCA 90 bp | GCCGGTCTGGCACATTCTTCTTGTAGTCTCTGTGATGCTTCTATCTaGCCATGCTGCTCACCTCCTCTGCCATCTGCCTTAATATGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AGLAHSSCSLCDASI*PCCSPPLPSALICS Trigger: GGAGCATATTAAGGCAGATGGCAGAGGAGGTGAGCAGCATGGGCAGATAGAAGCATCACAGAGACTACAAGAAGAATGTGCCAGACCGGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS GCA 90 bp | CATCCTCCACTCCTCCACTATAACATGACCCTCACCAGACACCAGTaGCATCCTCTTGGATTTCCTAGCTTCCAGAACTGTGGGTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: HPPLLHYNMTLTRHQ*HPLGFPSFQNCGSN Trigger: ATTTGACCCACAGTTCTGGAAGCTAGGAAATCCAAGAGGATGGCACTGGTGTCTGGTGAGGGTCATGTTATAGTGGAGGAGTGGAGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 |
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| CDS CCA 90 bp | TGTATCCCTCCAAGATCCTGGATAAAGGGACTGGCTCCACGATGCTaGCTTTGCTTCTCTCTACTCTCATGTTTCTGGTATGGGGACCAT | + |
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Preference number: 5 (lower is better) Translates to: CIPPRSWIKGLAPRC*LCFSLLSCFWYGDH Trigger: ATGGTCCCCATACCAGAAACATGAGAGTAGAGAGAAGCAAAGCCAGCATCGTGGAGCCAGTCCCTTTATCCAGGATCTTGGAGGGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS GCA 90 bp | CTGGCACATTCTTCTTGTAGTCTCTGTGATGCTTCTATCTGCCCATaGTGCTCACCTCCTCTGCCATCTGCCTTAATATGCTCCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LAHSSCSLCDASICP*CSPPLPSALICSLF Trigger: AAAGAGGGAGCATATTAAGGCAGATGGCAGAGGAGGTGAGCAGCATGGGCAGATAGAAGCATCACAGAGACTACAAGAAGAATGTGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS GCA 90 bp | TCTGGTGAGGGCCCATTTCCTGATTCATTGCAAACAAATTCTCACTaGCTTCACACACAATGGAGGAGAAAACGCAGCTCTCTGCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SGEGPFPDSLQTNSH*LHTQWRRKRSSLQP Trigger: AGGCTGCAGAGAGCTGCGTTTTCTCCTCCATTGTGTGTGAAGGCAGTGAGAATTTGTTTGCAATGAATCAGGAAATGGGCCCTCACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS CCA 90 bp | CTGGCTTTGCTTCTCTCTACTCTCATGTTTCTGGTATGGGGACCATaGTCTCCATGTAATGTGCGCTCTCTCCTCTTAGTCAGTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LALLLSTLMFLVWGP*SPCNVRSLLLVSVQ Trigger: CTGAACACTGACTAAGAGGAGAGAGCGCACATTACATGGAGACCATGGTCCCCATACCAGAAACATGAGAGTAGAGAGAAGCAAAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CCA 90 bp | GCCCAATTTCCTATGACATCTTCTCCAGTAAACAATGCCAGGGCCTaGCAGATGAAGGATGCAGTCGTGTGTATCAGGAAACCCAATTCT | + |
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Preference number: 5 (lower is better) Translates to: AQFPMTSSPVNNARA*QMKDAVVCIRKPNS Trigger: AGAATTGGGTTTCCTGATACACACGACTGCATCCTTCATCTGCCAGGCCCTGGCATTGTTTACTGGAGAAGATGTCATAGGAAATTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456933.1 |
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| CDS CCA 90 bp | GAACAATCATGTAAAGGAGAAAAGAAACCAGTTCCAGTCCTCACATaGGCACCGAGACTGTTTCTGCCCTGCCTGCCAGAACACATAATC | + |
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Preference number: 5 (lower is better) Translates to: EQSCKGEKKPVPVLT*APRLFLPCLPEHII Trigger: GATTATGTGTTCTGGCAGGCAGGGCAGAAACAGTCTCGGTGCCCATGTGAGGACTGGAACTGGTTTCTTTTCTCCTTTACATGATTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667517.1 |
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| CDS GCA 90 bp | GCACATTCTTCTTGTAGTCTCTGTGATGCTTCTATCTGCCCATGCTaGTCACCTCCTCTGCCATCTGCCTTAATATGCTCCCTCTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: AHSSCSLCDASICPC*SPPLPSALICSLFY Trigger: ATAAAAGAGGGAGCATATTAAGGCAGATGGCAGAGGAGGTGAGCAGCATGGGCAGATAGAAGCATCACAGAGACTACAAGAAGAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CCA 90 bp | GAGCTGATGGTAATTCTTAATCAGTGTGGCCACTATGAGCCGGTCTaGCACATTCTTCTTGTAGTCTCTGTGATGCTTCTATCTGCCCAT | + |
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Preference number: 5 (lower is better) Translates to: ELMVILNQCGHYEPV*HILLVVSVMLLSAH Trigger: ATGGGCAGATAGAAGCATCACAGAGACTACAAGAAGAATGTGCCAGACCGGCTCATAGTGGCCACACTGATTAAGAATTACCATCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CCA 90 bp | CCAATTCTGAGATGTATCCACTTCCCCTCATGGGGCTTCGAGACTTaGCTCCCAGCTATGGAGTTACCTTTCTATGAGAAGAATGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: PILRCIHFPSWGFET*LPAMELPFYEKNVK Trigger: TTTGACATTCTTCTCATAGAAAGGTAACTCCATAGCTGGGAGCCAAGTCTCGAAGCCCCATGAGGGGAAGTGGATACATCTCAGAATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456933.1 |
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| CDS GCA 90 bp | AGATCAAAGTGCTGGTGTCTGGTGAGGGCCCATTTCCTGATTCATTaGAAACAAATTCTCACTGCCTTCACACACAATGGAGGAGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: RSKCWCLVRAHFLIH*KQILTAFTHNGGEN Trigger: GTTTTCTCCTCCATTGTGTGTGAAGGCAGTGAGAATTTGTTTGCAATGAATCAGGAAATGGGCCCTCACCAGACACCAGCACTTTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS CCA 90 bp | AGTCTTTATTTAATTTCTACAGAAGACTGTATCCCTCCAAGATCCTaGATAAAGGGACTGGCTCCACGATGCTGGCTTTGCTTCTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: SLYLISTEDCIPPRS*IKGLAPRCWLCFSL Trigger: TAGAGAGAAGCAAAGCCAGCATCGTGGAGCCAGTCCCTTTATCCAGGATCTTGGAGGGATACAGTCTTCTGTAGAAATTAAATAAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CCA 90 bp | TGCCTGGTTTCAGTACTAGTTAGCATAGAGACAGTAGACAATATTTaGCCCCAGAACTGTTTGGTACAGGAAGAAGGTATGTTTGATCTC | + |
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Preference number: 5 (lower is better) Translates to: CLVSVLVSIETVDNI*PQNCLVQEEGMFDL Trigger: GAGATCAAACATACCTTCTTCCTGTACCAAACAGTTCTGGGGCCAAATATTGTCTACTGTCTCTATGCTAACTAGTACTGAAACCAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 ENST00000665349.1 |
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| CDS GCA 90 bp | ATTCATTTCTCACAGTTCTGTAGGTTGGAAAATCTAAGATCAAAGTaGTGGTGTCTGGTGAGGGCCCATTTCCTGATTCATTGCAAACAA | + |
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Preference number: 5 (lower is better) Translates to: IHFSQFCRLENLRSK*WCLVRAHFLIHCKQ Trigger: TTGTTTGCAATGAATCAGGAAATGGGCCCTCACCAGACACCAGCACTTTGATCTTAGATTTTCCAACCTACAGAACTGTGAGAAATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS CCA 90 bp | CATTTCTCACAGTTCTGTAGGTTGGAAAATCTAAGATCAAAGTGCTaGTGTCTGGTGAGGGCCCATTTCCTGATTCATTGCAAACAAATT | + |
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Preference number: 5 (lower is better) Translates to: HFSQFCRLENLRSKC*CLVRAHFLIHCKQI Trigger: AATTTGTTTGCAATGAATCAGGAAATGGGCCCTCACCAGACACCAGCACTTTGATCTTAGATTTTCCAACCTACAGAACTGTGAGAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS TCA 90 bp | AGAATGTGCCATAATCAGCTCAGCATTCTCAGAAACACCCACATTTaGTCAGGTGTTAAGATAGTTTCTAAAAGAACCCATGCTCATATA | + |
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Preference number: 5 (lower is better) Translates to: RMCHNQLSILRNTHI*SGVKIVSKRTHAHI Trigger: TATATGAGCATGGGTTCTTTTAGAAACTATCTTAACACCTGATCAAATGTGGGTGTTTCTGAGAATGCTGAGCTGATTATGGCACATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS GCA 72 bp | TCATTTGCCAGAAGCCGTCACTCGGTCCCAACCCACTaGAAAGGAGGCTGGCAGACTGGAAATCCACCATAC | + |
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Preference number: 6 (lower is better) Translates to: SFARSRHSVPTH*KGGWQTGNPPY Trigger: GTATGGTGGATTTCCAGTCTGCCAGCCTCCTTTGCAGTGGGTTGGGACCGAGTGACGGCTTCTGGCAAATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665349.1 |
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| CDS CCA 72 bp | AAAGCTCACCCCTCTCTGATCCGGTTGAAAACACCATaGTACTTGCCAGGCAGCTGGGTTCCAGTCCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KAHPSLIRLKTP*YLPGSWVPVPA Trigger: TGCTGGGACTGGAACCCAGCTGCCTGGCAAGTACCATGGTGTTTTCAACCGGATCAGAGAGGGGTGAGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS CAA 72 bp | CACCCCTCTCTGATCCGGTTGAAAACACCATGGTACTaGCCAGGCAGCTGGGTTCCAGTCCCAGCATTCCTA | + |
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Preference number: 6 (lower is better) Translates to: HPSLIRLKTPWY*PGSWVPVPAFL Trigger: TAGGAATGCTGGGACTGGAACCCAGCTGCCTGGCAAGTACCATGGTGTTTTCAACCGGATCAGAGAGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS TCA 72 bp | GTGTTTGCTTCCATCCTCCACTCCTCCACTATAACATaGCCCTCACCAGACACCAGTGCCATCCTCTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: VFASILHSSTIT*PSPDTSAILLD Trigger: ATCCAAGAGGATGGCACTGGTGTCTGGTGAGGGTCATGTTATAGTGGAGGAGTGGAGGATGGAAGCAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 |
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| CDS GCA 72 bp | TCCTGGATAAAGGGACTGGCTCCACGATGCTGGCTTTaGTTCTCTCTACTCTCATGTTTCTGGTATGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SWIKGLAPRCWL*FSLLSCFWYGD Trigger: GTCCCCATACCAGAAACATGAGAGTAGAGAGAAGCAAAGCCAGCATCGTGGAGCCAGTCCCTTTATCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CCA 72 bp | ATCCGGTTGAAAACACCATGGTACTTGCCAGGCAGCTaGGTTCCAGTCCCAGCATTCCTAGAGTTAGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: IRLKTPWYLPGS*VPVPAFLELVV Trigger: CACAACTAACTCTAGGAATGCTGGGACTGGAACCCAGCTGCCTGGCAAGTACCATGGTGTTTTCAACCGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS CCA 72 bp | CTAGCTCCCTCACCCTCCTCTGTGAAAAGACCACCTTaGAATCTTTCCACTCACCTCCACACCACTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LAPSPSSVKRPP*NLSTHLHTTSF Trigger: AAAGGAAGTGGTGTGGAGGTGAGTGGAAAGATTCCAAGGTGGTCTTTTCACAGAGGAGGGTGAGGGAGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS CCA 72 bp | TGTAAAGGAGAAAAGAAACCAGTTCCAGTCCTCACATaGGCACCGAGACTGTTTCTGCCCTGCCTGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: CKGEKKPVPVLT*APRLFLPCLPE Trigger: TTCTGGCAGGCAGGGCAGAAACAGTCTCGGTGCCCATGTGAGGACTGGAACTGGTTTCTTTTCTCCTTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667517.1 |
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| CDS TCA 72 bp | GAAGGATGCAGTCGTGTGTATCAGGAAACCCAATTCTaGGATGTATCCACTTCCCCTCATGGGGCTTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: EGCSRVYQETQF*DVSTSPHGASR Trigger: TCTCGAAGCCCCATGAGGGGAAGTGGATACATCTCAGAATTGGGTTTCCTGATACACACGACTGCATCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456933.1 |
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| CDS CCA 72 bp | CTGGCTTTGCTTCTCTCTACTCTCATGTTTCTGGTATaGGGACCATGGTCTCCATGTAATGTGCGCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LALLLSTLMFLV*GPWSPCNVRSL Trigger: GAGAGAGCGCACATTACATGGAGACCATGGTCCCCATACCAGAAACATGAGAGTAGAGAGAAGCAAAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CCA 72 bp | AGATGTATCCACTTCCCCTCATGGGGCTTCGAGACTTaGCTCCCAGCTATGGAGTTACCTTTCTATGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RCIHFPSWGFET*LPAMELPFYEK Trigger: CTTCTCATAGAAAGGTAACTCCATAGCTGGGAGCCAAGTCTCGAAGCCCCATGAGGGGAAGTGGATACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456933.1 |
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| CDS CAA 72 bp | ATCCTGGATAAAGGGACTGGCTCCACGATGCTGGCTTaGCTTCTCTCTACTCTCATGTTTCTGGTATGGGGA | + |
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Preference number: 6 (lower is better) Translates to: ILDKGTGSTMLA*LLSTLMFLVWG Trigger: TCCCCATACCAGAAACATGAGAGTAGAGAGAAGCAAAGCCAGCATCGTGGAGCCAGTCCCTTTATCCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CAA 72 bp | GAGGAGGTAGGAGCTCTTGTGAGAACCACGGGAATTTaGGCAGAACCTTTATGGGAACCATATGGCAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: EEVGALVRTTGI*AEPLWEPYGSN Trigger: GTTGCTGCCATATGGTTCCCATAAAGGTTCTGCCAAAATTCCCGTGGTTCTCACAAGAGCTCCTACCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653589.1 |
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| CDS GCA 72 bp | TCTTCTTGTAGTCTCTGTGATGCTTCTATCTGCCCATaGTGCTCACCTCCTCTGCCATCTGCCTTAATATGC | + |
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Preference number: 6 (lower is better) Translates to: SSCSLCDASICP*CSPPLPSALIC Trigger: GCATATTAAGGCAGATGGCAGAGGAGGTGAGCAGCATGGGCAGATAGAAGCATCACAGAGACTACAAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CCA 72 bp | CTTCTCTCTACTCTCATGTTTCTGGTATGGGGACCATaGTCTCCATGTAATGTGCGCTCTCTCCTCTTAGTC | + |
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Preference number: 6 (lower is better) Translates to: LLSTLMFLVWGP*SPCNVRSLLLV Trigger: GACTAAGAGGAGAGAGCGCACATTACATGGAGACCATGGTCCCCATACCAGAAACATGAGAGTAGAGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CCA 72 bp | TTAATTTCTACAGAAGACTGTATCCCTCCAAGATCCTaGATAAAGGGACTGGCTCCACGATGCTGGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: LISTEDCIPPRS*IKGLAPRCWLC Trigger: GCAAAGCCAGCATCGTGGAGCCAGTCCCTTTATCCAGGATCTTGGAGGGATACAGTCTTCTGTAGAAATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CAA 90 bp | CAAAAGTGGATCATCATAAAGGTCTTCCTTCTTGTCATCTTCATGTaGAGTAGGAGTTCATTTGCCAGAAGCCGTCACTCGGTCCCAACC | + |
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Preference number: 6 (lower is better) Translates to: QKWIIIKVFLLVIFM*SRSSFARSRHSVPT Trigger: GGTTGGGACCGAGTGACGGCTTCTGGCAAATGAACTCCTACTCAACATGAAGATGACAAGAAGGAAGACCTTTATGATGATCCACTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665349.1 |
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| CDS TCA 72 bp | TATGCCCCCACACACATTACCACTAGTAGAGAGAAATaGAGAAATCTGGCTGTACTCTCTTCCTTCACCCCT | + |
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Preference number: 6 (lower is better) Translates to: YAPTHITTSREK*RNLAVLSSFTP Trigger: AGGGGTGAAGGAAGAGAGTACAGCCAGATTTCTTCATTTCTCTCTACTAGTGGTAATGTGTGTGGGGGCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS TCA 72 bp | TGCAAAGGAGGCTGGCAGACTGGAAATCCACCATACTaGCCTGCTTTAAAACTTATGACTAACCAGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CKGGWQTGNPPY*PALKLMTNQPS Trigger: AGAAGGCTGGTTAGTCATAAGTTTTAAAGCAGGTCAGTATGGTGGATTTCCAGTCTGCCAGCCTCCTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665349.1 |
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| CDS CCA 72 bp | TTAAGAGGTGAAGCCAGCTGGACTTTCTGGGTCAAGTaGGGACTTGAAGAACTTTTCTGTCTAGCTAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: LRGEASWTFWVK*GLEELFCLAKG Trigger: TCCTTTAGCTAGACAGAAAAGTTCTTCAAGTCCCCACTTGACCCAGAAAGTCCAGCTGGCTTCACCTCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456933.1 |
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| CDS CCA 72 bp | GGTACAGGATCTTGTCATCAAAATCAGGTCCAGATGTaGCAGAGGCTCCATAGCTTCAATTCCTTGAGTACA | + |
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Preference number: 6 (lower is better) Translates to: GTGSCHQNQVQM*QRLHSFNSLST Trigger: TGTACTCAAGGAATTGAAGCTATGGAGCCTCTGCCACATCTGGACCTGATTTTGATGACAAGATCCTGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000456933.1 ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 ENST00000665349.1 |
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| CDS CCA 72 bp | TCCCCTCATGGGGCTTCGAGACTTGGCTCCCAGCTATaGAGTTACCTTTCTATGAGAAGAATGTCAAATAAT | + |
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Preference number: 6 (lower is better) Translates to: SPHGASRLGSQL*SYLSMRRMSNN Trigger: ATTATTTGACATTCTTCTCATAGAAAGGTAACTCCATAGCTGGGAGCCAAGTCTCGAAGCCCCATGAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456933.1 |
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| CDS CCA 72 bp | ATGGTGGTTACAAGAGGCTTTATTATGGGGTGTTTGTaGGGTGGGGTTAGAAAGATGTTGGTCAAAGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: MVVTRGFIMGCL*GGVRKMLVKGY Trigger: GTACCCTTTGACCAACATCTTTCTAACCCCACCCCACAAACACCCCATAATAAAGCCTCTTGTAACCACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653589.1 ENST00000655217.1 |
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| CDS CCA 72 bp | CAGTTCTGTAGGTTGGAAAATCTAAGATCAAAGTGCTaGTGTCTGGTGAGGGCCCATTTCCTGATTCATTGC | + |
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Preference number: 6 (lower is better) Translates to: QFCRLENLRSKC*CLVRAHFLIHC Trigger: GCAATGAATCAGGAAATGGGCCCTCACCAGACACCAGCACTTTGATCTTAGATTTTCCAACCTACAGAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS CAA 72 bp | CCCACCATACACTATAGGTCAAAGTCACAAGCCAGCTaGTTTACAAGGGGTGGAGACATAAGCATCACCTTT | + |
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Preference number: 6 (lower is better) Translates to: PTIHYRSKSQAS*FTRGGDISITF Trigger: AAAGGTGATGCTTATGTCTCCACCCCTTGTAAACAAGCTGGCTTGTGACTTTGACCTATAGTGTATGGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 ENST00000665349.1 |
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| CDS TCA 72 bp | CAAGGGAAAGTGTTTATGGGATTTCGGGGCCTGAAATaGGTCATTTTAAGGCAAGGTGGAGTTCCTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: QGKVFMGFRGLK*VILRQGGVPSS Trigger: AGATGAAGGAACTCCACCTTGCCTTAAAATGACTCATTTCAGGCCCCGAAATCCCATAAACACTTTCCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS GCA 72 bp | TCACAGTTCTGTAGGTTGGAAAATCTAAGATCAAAGTaGTGGTGTCTGGTGAGGGCCCATTTCCTGATTCAT | + |
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Preference number: 6 (lower is better) Translates to: SQFCRLENLRSK*WCLVRAHFLIH Trigger: ATGAATCAGGAAATGGGCCCTCACCAGACACCAGCACTTTGATCTTAGATTTTCCAACCTACAGAACTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS CCA 72 bp | GTAATTCTTAATCAGTGTGGCCACTATGAGCCGGTCTaGCACATTCTTCTTGTAGTCTCTGTGATGCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: VILNQCGHYEPV*HILLVVSVMLL Trigger: TAGAAGCATCACAGAGACTACAAGAAGAATGTGCCAGACCGGCTCATAGTGGCCACACTGATTAAGAATTAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CAA 72 bp | ATTATGAAATTAGTCTCGGGCTTGAGGTACAGGATCTaGTCATCAAAATCAGGTCCAGATGTGGCAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: IMKLVSGLRYRI*SSKSGPDVAEA Trigger: AGCCTCTGCCACATCTGGACCTGATTTTGATGACAAGATCCTGTACCTCAAGCCCGAGACTAATTTCATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000456933.1 ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 ENST00000665349.1 |
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| CDS CAA 72 bp | AGAAGAACACTAATTCCATTAATGAGAGTGAAGCCCTaGTGGCCCAATCACCTCCCAAAGGACAATCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: RRTLIPLMRVKP*WPNHLPKDNLL Trigger: TAGGAGATTGTCCTTTGGGAGGTGATTGGGCCACAAGGGCTTCACTCTCATTAATGGAATTAGTGTTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS CAA 72 bp | ATCATCATAAAGGTCTTCCTTCTTGTCATCTTCATGTaGAGTAGGAGTTCATTTGCCAGAAGCCGTCACTCG | + |
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Preference number: 6 (lower is better) Translates to: IIIKVFLLVIFM*SRSSFARSRHS Trigger: CGAGTGACGGCTTCTGGCAAATGAACTCCTACTCAACATGAAGATGACAAGAAGGAAGACCTTTATGATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665349.1 |
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| CDS CCA 72 bp | TCAGTACTAGTTAGCATAGAGACAGTAGACAATATTTaGCCCCAGAACTGTTTGGTACAGGAAGAAGGTATG | + |
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Preference number: 6 (lower is better) Translates to: SVLVSIETVDNI*PQNCLVQEEGM Trigger: CATACCTTCTTCCTGTACCAAACAGTTCTGGGGCCAAATATTGTCTACTGTCTCTATGCTAACTAGTACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 ENST00000665349.1 |
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| CDS CAA 72 bp | GTCCAGATGTGGCAGAGGCTCCATAGCTTCAATTCCTaGAGTACAATTCTTTTTGATCTAAAAACCTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VQMWQRLHSFNS*STILFDLKTSG Trigger: ACCTGAGGTTTTTAGATCAAAAAGAATTGTACTCAAGGAATTGAAGCTATGGAGCCTCTGCCACATCTGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000456933.1 |
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| CDS CAA 72 bp | GTCCAGATGTGGCAGAGGCTCCATAGCTTCAATTCCTaGAGTACAATTCTTTTTGATCTAAAAACCGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VQMWQRLHSFNS*STILFDLKTVF Trigger: GAACACGGTTTTTAGATCAAAAAGAATTGTACTCAAGGAATTGAAGCTATGGAGCCTCTGCCACATCTGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000664740.1 |
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| CDS TCA 72 bp | GCCCCAGAACTGTTTGGTACAGGAAGAAGGTATGTTTaGTCTCAGTTCTTAGTCTCTGATATTGGTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: APELFGTGRRYV*SQFLVSDIGLF Trigger: AAAAAGACCAATATCAGAGACTAAGAACTGAGATCAAACATACCTTCTTCCTGTACCAAACAGTTCTGGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 ENST00000665349.1 |
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| CDS CAA 72 bp | TTGTTTCAGAAGCTGTTAGTCTTTGCTTATGCGTGTTaGCAAACCACATATAGTTGTGCAGGTTGTGCACAT | + |
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Preference number: 6 (lower is better) Translates to: LFQKLLVFAYAC*QTTYSCAGCAH Trigger: ATGTGCACAACCTGCACAACTATATGTGGTTTGCAAACACGCATAAGCAAAGACTAACAGCTTCTGAAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CAA 72 bp | ATAGAGACAGTAGACAATATTTGGCCCCAGAACTGTTaGGTACAGGAAGAAGGTATGTTTGATCTCAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: IETVDNIWPQNC*VQEEGMFDLSS Trigger: AGAACTGAGATCAAACATACCTTCTTCCTGTACCAAACAGTTCTGGGGCCAAATATTGTCTACTGTCTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 ENST00000665349.1 |
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| CDS CAA 72 bp | GTCCAGATGTGGCAGAGGCTCCATAGCTTCAATTCCTaGAGTACAATTCTTTTTGATCTAAAAACCTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VQMWQRLHSFNS*STILFDLKTCF Trigger: AAAGCAGGTTTTTAGATCAAAAAGAATTGTACTCAAGGAATTGAAGCTATGGAGCCTCTGCCACATCTGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS CAA 90 bp | ATTCAGAGTTTGTTTCAGAAGCTGTTAGTCTTTGCTTATGCGTGTTaGCAAACCACATATAGTTGTGCAGGTTGTGCACATAAAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: IQSLFQKLLVFAYAC*QTTYSCAGCAHKEA Trigger: TGCTTCTTTATGTGCACAACCTGCACAACTATATGTGGTTTGCAAACACGCATAAGCAAAGACTAACAGCTTCTGAAACAAACTCTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000411798.2 ENST00000440116.2 ENST00000653589.1 ENST00000654040.1 ENST00000655217.1 ENST00000667517.1 ENST00000669804.1 |
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| CDS CAA 72 bp | GTCCAGATGTGGCAGAGGCTCCATAGCTTCAATTCCTaGAGTACAATTCTTTTTGATCTAAAAACTAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VQMWQRLHSFNS*STILFDLKTKQ Trigger: TTGCTTAGTTTTTAGATCAAAAAGAATTGTACTCAAGGAATTGAAGCTATGGAGCCTCTGCCACATCTGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000665349.1 |
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| CDS CAA 72 bp | GATAGAAACAACACGATGAAAGTCTTGAAGAAAGTCTaGATGAGCAAGGTAAGTAAGCTCTTTAGTTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: DRNNTMKVLKKV*MSKVSKLFSWC Trigger: GCACCAACTAAAGAGCTTACTTACCTTGCTCATCAAGACTTTCTTCAAGACTTTCATCGTGTTGTTTCTATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS TCA 72 bp | TTTAAAACCGGGCTTTTGTTAAACACTAGTGCTGAATaGACATCCAGCAGCATACTTGGCAAACTAATGTAT | + |
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Preference number: 6 (lower is better) Translates to: FKTGLLLNTSAE*TSSSILGKLMY Trigger: ATACATTAGTTTGCCAAGTATGCTGCTGGATGTTCATTCAGCACTAGTGTTTAACAAAAGCCCGGTTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411798.2 |
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| CDS TCA 72 bp | CATAATCAGCTCAGCATTCTCAGAAACACCCACATTTaGTCAGGTGTTAAGATAGTTTCTAAAAGAACCCAT | + |
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Preference number: 6 (lower is better) Translates to: HNQLSILRNTHI*SGVKIVSKRTH Trigger: ATGGGTTCTTTTAGAAACTATCTTAACACCTGATCAAATGTGGGTGTTTCTGAGAATGCTGAGCTGATTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS TCA 72 bp | CCATTTAACATTCCCATTTACATTCCCAGAAGGGTATaGGGATTGTTTTCCATATATCCTTGCCAACAACTT | + |
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Preference number: 6 (lower is better) Translates to: PFNIPIYIPRRV*GLFSIYPCQQL Trigger: AAGTTGTTGGCAAGGATATATGGAAAACAATCCTCATACCCTTCTGGGAATGTAAATGGGAATGTTAAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS CAA 72 bp | TTTATGGCCAGTTCCACTGTATGGATATGCCACATTTaGTTTGTTCATTTATCAGTCGATGGTCATTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: FMASSTVWICHI*FVHLSVDGHLS Trigger: ACTCAAATGACCATCGACTGATAAATGAACAAACAAAATGTGGCATATCCATACAGTGGAACTGGCCATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS CAA 72 bp | GTCCAGATGTGGCAGAGGCTCCATAGCTTCAATTCCTaGAGTACAATTCTTTTTGATCTAAAAACAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: VQMWQRLHSFNS*STILFDLKTNL Trigger: AAGATTTGTTTTTAGATCAAAAAGAATTGTACTCAAGGAATTGAAGCTATGGAGCCTCTGCCACATCTGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000656764.1 |
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| CDS CAA 90 bp | TTTATTCCTTTTATGGCCAGTTCCACTGTATGGATATGCCACATTTaGTTTGTTCATTTATCAGTCGATGGTCATTTGAGTTATTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: FIPFMASSTVWICHI*FVHLSVDGHLSYSH Trigger: ATGGGAATAACTCAAATGACCATCGACTGATAAATGAACAAACAAAATGTGGCATATCCATACAGTGGAACTGGCCATAAAAGGAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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| CDS CAA 90 bp | TTTGGGGTAGATAGAAACAACACGATGAAAGTCTTGAAGAAAGTCTaGATGAGCAAGGTAAGTAAGCTCTTTAGTTGGTGCTATTATTTA | + |
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Preference number: 6 (lower is better) Translates to: FGVDRNNTMKVLKKV*MSKVSKLFSWCYYL Trigger: TAAATAATAGCACCAACTAAAGAGCTTACTTACCTTGCTCATCAAGACTTTCTTCAAGACTTTCATCGTGTTGTTTCTATCTACCCCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS CCA 72 bp | AAAGTCTTGATGAGCAAGGTAAGTAAGCTCTTTAGTTaGTGCTATTATTTAAATATACGTCCCCTCCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: KVLMSKVSKLFS*CYYLNIRPLQN Trigger: GTTTTGGAGGGGACGTATATTTAAATAATAGCACCAACTAAAGAGCTTACTTACCTTGCTCATCAAGACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664663.1 |
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| CDS CAA 72 bp | AAAAAGATTCATCAAATTATGAAATTAGTCTCGGGCTaGAGGTACAGGATCTTGTCATCAAAATCAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: KKIHQIMKLVSG*RYRILSSKSGP Trigger: TGGACCTGATTTTGATGACAAGATCCTGTACCTCAAGCCCGAGACTAATTTCATAATTTGATGAATCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000456933.1 ENST00000656764.1 ENST00000664663.1 ENST00000664740.1 ENST00000665349.1 |
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| CDS TCA 72 bp | GATGGTCATTTGAGTTATTCCCATCTTTGGCTATTATaGATAATGCCATTTGTGTACAAGTTTTTGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: DGHLSYSHLWLL*IMPFVYKFLLR Trigger: CCTCAACAAAAACTTGTACACAAATGGCATTATTCATAATAGCCAAAGATGGGAATAACTCAAATGACCATC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655217.1 |
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