Pregenerated sensors for LINC02606 (Homo sapiens)
Ensembl gene IDs: ENSG00000284693Ensembl transcript IDs: ENST00000641325.1, ENST00000641507.1, ENST00000641940.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCAGGGCTTACGTCACGCAAGCGCCGCGGGTGTGTGACGTCATCTaGGAGCGCCACGCGCGGTCCCGAAAACCTGAGCACCCTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SRAYVTQAPRVCDVI*ERHARSRKPEHPLA Trigger: AGCCAGAGGGTGCTCAGGTTTTCGGGACCGCGCGTGGCGCTCTCAGATGACGTCACACACCCGCGGCGCTTGCGTGACGTAAGCCCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 90 bp | CCCATTAGTGGTGGTGTTCTCTGCCGACCTGCGGAGCCTTCTTACTaGGCAGGGCTTACGTCACGCAAGCGCCGCGGGTGTGTGACGTCA | + |
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Preference number: 5 (lower is better) Translates to: PISGGVLCRPAEPSY*AGLTSRKRRGCVTS Trigger: TGACGTCACACACCCGCGGCGCTTGCGTGACGTAAGCCCTGCTCAGTAAGAAGGCTCCGCAGGTCGGCAGAGAACACCACCACTAATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 90 bp | TCCACCCCTAAGACACTCACCCTATTCCACACCCAGAGGAGGACATaGGGTGCTCCCTTCCAGAGCCTGGAGACCCTGGGATGGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: STPKTLTLFHTQRRT*GAPFQSLETLGWLQ Trigger: CTGGAGCCATCCCAGGGTCTCCAGGCTCTGGAAGGGAGCACCCCATGTCCTCCTCTGGGTGTGGAATAGGGTGAGTGTCTTAGGGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 90 bp | GAGTCAGCTGCAGTGGAGGGGGATGCAGTGCACGCTGCTGAAGGATaGACCTCTGGGCAGGGGTCCCTGTTGCTCAGGTCCAAATGCAGA | + |
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Preference number: 5 (lower is better) Translates to: ESAAVEGDAVHAAEG*TSGQGSLLLRSKCR Trigger: TCTGCATTTGGACCTGAGCAACAGGGACCCCTGCCCAGAGGTCCATCCTTCAGCAGCGTGCACTGCATCCCCCTCCACTGCAGCTGACTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 90 bp | TCTCATAGAGTCAGCTGCAGTGGAGGGGGATGCAGTGCACGCTGCTaGAGGATGGACCTCTGGGCAGGGGTCCCTGTTGCTCAGGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SHRVSCSGGGCSARC*RMDLWAGVPVAQVQ Trigger: TTGGACCTGAGCAACAGGGACCCCTGCCCAGAGGTCCATCCTTCAGCAGCGTGCACTGCATCCCCCTCCACTGCAGCTGACTCTATGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 90 bp | GTGGGACCTGGATGCAGACAGAGCTGGAAACCACAGGTCTTGTGGTaGCAAGGAAGCCAGACACTGGCTCCCCAACCCTTACAGCACGGC | + |
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Preference number: 5 (lower is better) Translates to: VGPGCRQSWKPQVLW*QGSQTLAPQPLQHG Trigger: GCCGTGCTGTAAGGGTTGGGGAGCCAGTGTCTGGCTTCCTTGTCACCACAAGACCTGTGGTTTCCAGCTCTGTCTGCATCCAGGTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS GCA 90 bp | GTGCGCGTGTGCGCGTCCGCCTGTGTGCACAACTGTTTTCTCTCCTaGTGTTGGTTAGTGGGACCTGGATGCAGACAGAGCTGGAAACCA | + |
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Preference number: 5 (lower is better) Translates to: VRVCASACVHNCFLS*CWLVGPGCRQSWKP Trigger: TGGTTTCCAGCTCTGTCTGCATCCAGGTCCCACTAACCAACAGCAGGAGAGAAAACAGTTGTGCACACAGGCGGACGCGCACACGCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 90 bp | GTGTGCGCGTCCGCCTGTGTGCACAACTGTTTTCTCTCCTGCTGTTaGTTAGTGGGACCTGGATGCAGACAGAGCTGGAAACCACAGGTC | + |
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Preference number: 5 (lower is better) Translates to: VCASACVHNCFLSCC*LVGPGCRQSWKPQV Trigger: GACCTGTGGTTTCCAGCTCTGTCTGCATCCAGGTCCCACTAACCAACAGCAGGAGAGAAAACAGTTGTGCACACAGGCGGACGCGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 90 bp | GCCGAGAGAAGAGGTTTCCCGTCAGCCCAGCTTTTGTCTCTCACATaGGCCCGAGACAGACAAACCACAACCACAGACTCGACCAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: AERRGFPSAQLLSLT*ARDRQTTTTDSTSC Trigger: ACAGCTGGTCGAGTCTGTGGTTGTGGTTTGTCTGTCTCGGGCTCATGTGAGAGACAAAAGCTGGGCTGACGGGAAACCTCTTCTCTCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 90 bp | ATGAGCCCGAGACAGACAAACCACAACCACAGACTCGACCAGCTGTaGAAGCGTCGAACAGGAAACCCAGAACATCTGGTGCTCCACTTC | + |
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Preference number: 5 (lower is better) Translates to: MSPRQTNHNHRLDQL*KRRTGNPEHLVLHF Trigger: GAAGTGGAGCACCAGATGTTCTGGGTTTCCTGTTCGACGCTTCCACAGCTGGTCGAGTCTGTGGTTGTGGTTTGTCTGTCTCGGGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 90 bp | TTTCAGGAAATTTCTGACCTGCCAGGTTTCCTAATCAGTCAGAGCTaGGGAGTGGGGGCCGAGAGAAGAGGTTTCCCGTCAGCCCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: FQEISDLPGFLISQS*GVGAERRGFPSAQL Trigger: AAGCTGGGCTGACGGGAAACCTCTTCTCTCGGCCCCCACTCCCCAGCTCTGACTGATTAGGAAACCTGGCAGGTCAGAAATTTCCTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 90 bp | GCTTCTTCTTGGGAGAATCCAGCTCTGGGTGTTTCAGGAAATTTCTaGCCTGCCAGGTTTCCTAATCAGTCAGAGCTGGGGAGTGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ASSWENPALGVSGNF*PARFPNQSELGSGG Trigger: GCCCCCACTCCCCAGCTCTGACTGATTAGGAAACCTGGCAGGTCAGAAATTTCCTGAAACACCCAGAGCTGGATTCTCCCAAGAAGAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS GCA 90 bp | CAGTGCACGCTGCTGAAGGATGGACCTCTGGGCAGGGGTCCCTGTTaGTCAGGTCCAAATGCAGACCGAACAGTAGCCTTAATCATTAAA | + |
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Preference number: 5 (lower is better) Translates to: QCTLLKDGPLGRGPC*SGPNADRTVALIIK Trigger: TTTAATGATTAAGGCTACTGTTCGGTCTGCATTTGGACCTGAGCAACAGGGACCCCTGCCCAGAGGTCCATCCTTCAGCAGCGTGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 90 bp | AGCAGCGGCTCAATGTCAGGCATTGGAGTAGAGACCATAGCAACCTaGCCTCCGTTTCATTCTGTTGGCAGGGCTGGCGGTCTTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: SSGSMSGIGVETIAT*PPFHSVGRAGGLSK Trigger: TTTAGAAAGACCGCCAGCCCTGCCAACAGAATGAAACGGAGGCCAGGTTGCTATGGTCTCTACTCCAATGCCTGACATTGAGCCGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS GCA 90 bp | TGCTCCAAGTCACAGAGCAAGTCGGCAGCACCTCGCTGCGTCAAATaGTTGTATGTTGGAATCCAAAGCTATTTATGGGACTTGGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: CSKSQSKSAAPRCVK*LYVGIQSYLWDLGP Trigger: GGGCCCCAAGTCCCATAAATAGCTTTGGATTCCAACATACAAGCATTTGACGCAGCGAGGTGCTGCCGACTTGCTCTGTGACTTGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 90 bp | CTGTGTGCACAACTGTTTTCTCTCCTGCTGTTGGTTAGTGGGACCTaGATGCAGACAGAGCTGGAAACCACAGGTCTTGTGGTGACAAGG | + |
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Preference number: 5 (lower is better) Translates to: LCAQLFSLLLLVSGT*MQTELETTGLVVTR Trigger: CCTTGTCACCACAAGACCTGTGGTTTCCAGCTCTGTCTGCATCCAGGTCCCACTAACCAACAGCAGGAGAGAAAACAGTTGTGCACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS GCA 90 bp | TTAAAACAATTTGAGGAGCATCTGTGGATGAATGCTGAGGCCATGTaGCGGTCAGGGGGCAGTCTTCCCATTAGTGGTGGTGTTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LKQFEEHLWMNAEAM*RSGGSLPISGGVLC Trigger: GCAGAGAACACCACCACTAATGGGAAGACTGCCCCCTGACCGGCACATGGCCTCAGCATTCATCCACAGATGCTCCTCAAATTGTTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 90 bp | GCATTGTTTGGAGGTGAGGTGGGAGGGCTCTGCTTACATAGAACTTaGCCTCAGCGTACAGACCCACAAAAAGCAACCTCTGGACAAAAG | + |
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Preference number: 5 (lower is better) Translates to: ALFGGEVGGLCLHRT*PQRTDPQKATSGQK Trigger: CTTTTGTCCAGAGGTTGCTTTTTGTGGGTCTGTACGCTGAGGCCAAGTTCTATGTAAGCAGAGCCCTCCCACCTCACCTCCAAACAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000641325.1 ENST00000641940.1 |
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| CDS CCA 90 bp | TGGCCTCCGTTTCATTCTGTTGGCAGGGCTGGCGGTCTTTCTAAATaGGATATTTGTAGAGGTTTCCATCGCCCCAGGTTCTGTAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: WPPFHSVGRAGGLSK*DICRGFHRPRFCKS Trigger: GGACTTACAGAACCTGGGGCGATGGAAACCTCTACAAATATCCCATTTAGAAAGACCGCCAGCCCTGCCAACAGAATGAAACGGAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 90 bp | CTTCATGTGCTGAGTGTTTTGCAGCAGCGGCTCAATGTCAGGCATTaGAGTAGAGACCATAGCAACCTGGCCTCCGTTTCATTCTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LHVLSVLQQRLNVRH*SRDHSNLASVSFCW Trigger: CCAACAGAATGAAACGGAGGCCAGGTTGCTATGGTCTCTACTCCAATGCCTGACATTGAGCCGCTGCTGCAAAACACTCAGCACATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS GCA 90 bp | TTAAAACAATTTGAGGAGCATCTGTGGATGAATGCTGAGGCCATGTaGCGGTCAGGGGGCAGTCTTCCCATTAGTGGTGGTGTTCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LKQFEEHLWMNAEAM*RSGGSLPISGGVLS Trigger: TGAGAGAACACCACCACTAATGGGAAGACTGCCCCCTGACCGGCACATGGCCTCAGCATTCATCCACAGATGCTCCTCAAATTGTTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641507.1 |
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| CDS CCA 90 bp | GGATGGGAGTTGGGGGTTCAGCTTCTTCTTGGGAGAATCCAGCTCTaGGTGTTTCAGGAAATTTCTGACCTGCCAGGTTTCCTAATCAGT | + |
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Preference number: 5 (lower is better) Translates to: GWELGVQLLLGRIQL*VFQEISDLPGFLIS Trigger: ACTGATTAGGAAACCTGGCAGGTCAGAAATTTCCTGAAACACCCAGAGCTGGATTCTCCCAAGAAGAAGCTGAACCCCCAACTCCCATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 90 bp | CGAGGAAATCCACATGCGGTGTCTCACAGGGCCTTCACACCTTTGTaGAGTAGATATTATCATCTCCATTCTGCAGATGAGGACACCAGG | + |
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Preference number: 5 (lower is better) Translates to: RGNPHAVSHRAFTPL*SRYYHLHSADEDTR Trigger: CCTGGTGTCCTCATCTGCAGAATGGAGATGATAATATCTACTTCACAAAGGTGTGAAGGCCCTGTGAGACACCGCATGTGGATTTCCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS GCA 90 bp | TTAAAACAATTTGAGGAGCATCTGTGGATGAATGCTGAGGCCATGTaGCGGTCAGGGGGCAGTCTTCCCATTAGTGGTGGTGTTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: LKQFEEHLWMNAEAM*RSGGSLPISGGVLV Trigger: AACTAGAACACCACCACTAATGGGAAGACTGCCCCCTGACCGGCACATGGCCTCAGCATTCATCCACAGATGCTCCTCAAATTGTTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641940.1 |
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| CDS CCA 90 bp | TTGTATGTTGGAATCCAAAGCTATTTATGGGACTTGGGGCCCAGTTaGGGCTTGTACACCCAACCCCCAAAGGTGAAGTTCTCTGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LYVGIQSYLWDLGPS*GLYTQPPKVKFSVP Trigger: AGGAACAGAGAACTTCACCTTTGGGGGTTGGGTGTACAAGCCCCAACTGGGCCCCAAGTCCCATAAATAGCTTTGGATTCCAACATACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 72 bp | GAGCAGGGCTTACGTCACGCAAGCGCCGCGGGTGTGTaGCGTCATCTGAGAGCGCCACGCGCGGTCCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: EQGLRHASAAGV*RHLRAPRAVPK Trigger: TTTCGGGACCGCGCGTGGCGCTCTCAGATGACGTCACACACCCGCGGCGCTTGCGTGACGTAAGCCCTGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | AGCGCCACGCGCGGTCCCGAAAACCTGAGCACCCTCTaGCTAAGGCGTTGCTGTAGAGACGGTGCGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SATRGPENLSTL*LRRCCRDGAPA Trigger: GGCTGGCGCACCGTCTCTACAGCAACGCCTTAGCCAGAGGGTGCTCAGGTTTTCGGGACCGCGCGTGGCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 72 bp | TACGTCACGCAAGCGCCGCGGGTGTGTGACGTCATCTaGGAGCGCCACGCGCGGTCCCGAAAACCTGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: YVTQAPRVCDVI*ERHARSRKPEH Trigger: GTGCTCAGGTTTTCGGGACCGCGCGTGGCGCTCTCAGATGACGTCACACACCCGCGGCGCTTGCGTGACGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 72 bp | GGTGGTGTTCTCTGCCGACCTGCGGAGCCTTCTTACTaGGCAGGGCTTACGTCACGCAAGCGCCGCGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GGVLCRPAEPSY*AGLTSRKRRGC Trigger: ACACCCGCGGCGCTTGCGTGACGTAAGCCCTGCTCAGTAAGAAGGCTCCGCAGGTCGGCAGAGAACACCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CAA 72 bp | GTGGTGTTCTCTCAAACCCAACTCCCGACAGCAACCTaGAGGCCACCCGAGGTGGCGCATGCGCAGTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: VVFSQTQLPTAT*RPPEVAHAQCA Trigger: CGCACACTGCGCATGCGCCACCTCGGGTGGCCTCAAGGTTGCTGTCGGGAGTTGGGTTTGAGAGAACACCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641507.1 |
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| CDS TCA 72 bp | TGGTGTTCTCTCAAACCCAACTCCCGACAGCAACCTTaGGGCCACCCGAGGTGGCGCATGCGCAGTGTGCGA | + |
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Preference number: 6 (lower is better) Translates to: WCSLKPNSRQQP*GHPRWRMRSVR Trigger: TCGCACACTGCGCATGCGCCACCTCGGGTGGCCTCAAGGTTGCTGTCGGGAGTTGGGTTTGAGAGAACACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641507.1 |
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| CDS CCA 72 bp | AACCACAGGTCTTGTGGTGACAAGGAAGCCAGACACTaGCTCCCCAACCCTTACAGCACGGCATCCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: NHRSCGDKEARH*LPNPYSTASLL Trigger: GAGGAGGGATGCCGTGCTGTAAGGGTTGGGGAGCCAGTGTCTGGCTTCCTTGTCACCACAAGACCTGTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CAA 72 bp | ACCCAGTCTCGCAGGCCACCTGCCAGCACCCGGTCCTaGGCTAGCTTCAGGTCACCATTGAAGAAAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: TQSRRPPASTRS*ASFRSPLKKGI Trigger: AATCCCTTTCTTCAATGGTGACCTGAAGCTAGCCAAGGACCGGGTGCTGGCAGGTGGCCTGCGAGACTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000641325.1 ENST00000641940.1 |
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| CDS CAA 90 bp | CGGGATCCGACCCAGTCTCGCAGGCCACCTGCCAGCACCCGGTCCTaGGCTAGCTTCAGGTCACCATTGAAGAAAGGGATTTATTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RDPTQSRRPPASTRS*ASFRSPLKKGIYFP Trigger: AGGAAAATAAATCCCTTTCTTCAATGGTGACCTGAAGCTAGCCAAGGACCGGGTGCTGGCAGGTGGCCTGCGAGACTGGGTCGGATCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000641325.1 ENST00000641940.1 |
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| CDS CAA 90 bp | CGTGTGCGCGTCCGCCTGTGTGCACAACTGTTTTCTCTCCTGCTGTaGGTTAGTGGGACCTGGATGCAGACAGAGCTGGAAACCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: RVRVRLCAQLFSLLL*VSGTWMQTELETTG Trigger: ACCTGTGGTTTCCAGCTCTGTCTGCATCCAGGTCCCACTAACCAACAGCAGGAGAGAAAACAGTTGTGCACACAGGCGGACGCGCACACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS GCA 72 bp | TGCGCGTCCGCCTGTGTGCACAACTGTTTTCTCTCCTaGTGTTGGTTAGTGGGACCTGGATGCAGACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: CASACVHNCFLS*CWLVGPGCRQS Trigger: GCTCTGTCTGCATCCAGGTCCCACTAACCAACAGCAGGAGAGAAAACAGTTGTGCACACAGGCGGACGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | AGCTGTGGAAGCGTCGAACAGGAAACCCAGAACATCTaGTGCTCCACTTCCTCTGAGGGCTGTGCACGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SCGSVEQETQNI*CSTSSEGCARL Trigger: CAGACGTGCACAGCCCTCAGAGGAAGTGGAGCACCAGATGTTCTGGGTTTCCTGTTCGACGCTTCCACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS GCA 72 bp | TTTGAGGAGCATCTGTGGATGAATGCTGAGGCCATGTaGCGGTCAGGGGGCAGTCTTCCCATTAGTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: FEEHLWMNAEAM*RSGGSLPISGG Trigger: ACCACCACTAATGGGAAGACTGCCCCCTGACCGGCACATGGCCTCAGCATTCATCCACAGATGCTCCTCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000641325.1 ENST00000641507.1 ENST00000641940.1 |
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| CDS GCA 72 bp | CAACGAAGAGCACCAAGTACCCTTGCTCTGCTGTCCTaGCGGGCAGTTGTCCCGGGATCAGTGTTTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: QRRAPSTLALLS*RAVVPGSVFLV Trigger: AACCAAAAACACTGATCCCGGGACAACTGCCCGGCAGGACAGCAGAGCAAGGGTACTTGGTGCTCTTCGTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS TCA 72 bp | AGAGGTTTCCCGTCAGCCCAGCTTTTGTCTCTCACATaGGCCCGAGACAGACAAACCACAACCACAGACTCG | + |
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Preference number: 6 (lower is better) Translates to: RGFPSAQLLSLT*ARDRQTTTTDS Trigger: CGAGTCTGTGGTTGTGGTTTGTCTGTCTCGGGCTCATGTGAGAGACAAAAGCTGGGCTGACGGGAAACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CAA 90 bp | CACAGAGCAAGTCGGCAGCACCTCGCTGCGTCAAATGCTTGTATGTaGGAATCCAAAGCTATTTATGGGACTTGGGGCCCAGTTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HRASRQHLAASNACM*ESKAIYGTWGPVGA Trigger: AGCCCCAACTGGGCCCCAAGTCCCATAAATAGCTTTGGATTCCAACATACAAGCATTTGACGCAGCGAGGTGCTGCCGACTTGCTCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | AGACAGACAAACCACAACCACAGACTCGACCAGCTGTaGAAGCGTCGAACAGGAAACCCAGAACATCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: RQTNHNHRLDQL*KRRTGNPEHLV Trigger: CACCAGATGTTCTGGGTTTCCTGTTCGACGCTTCCACAGCTGGTCGAGTCTGTGGTTGTGGTTTGTCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | CTGAGTGTTTTGCAGCAGCGGCTCAATGTCAGGCATTaGAGTAGAGACCATAGCAACCTGGCCTCCGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSVLQQRLNVRH*SRDHSNLASVS Trigger: TGAAACGGAGGCCAGGTTGCTATGGTCTCTACTCCAATGCCTGACATTGAGCCGCTGCTGCAAAACACTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | GGAATCCAAAGCTATTTATGGGACTTGGGGCCCAGTTaGGGCTTGTACACCCAACCCCCAAAGGTGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: GIQSYLWDLGPS*GLYTQPPKVKF Trigger: GAACTTCACCTTTGGGGGTTGGGTGTACAAGCCCCAACTGGGCCCCAAGTCCCATAAATAGCTTTGGATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | GTCGGCAGCACCTCGCTGCGTCAAATGCTTGTATGTTaGAATCCAAAGCTATTTATGGGACTTGGGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: VGSTSLRQMLVC*NPKLFMGLGAQ Trigger: CTGGGCCCCAAGTCCCATAAATAGCTTTGGATTCCAACATACAAGCATTTGACGCAGCGAGGTGCTGCCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | GCAGTGTTGCAACGAGAAAAGGGAGCCCAGCCTCTCTaGAGCAGTTACGATGGGCAAACAATGTCGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AVLQREKGAQPL*SSYDGQTMSRK Trigger: TTTCCTCGACATTGTTTGCCCATCGTAACTGCTCCAGAGAGGCTGGGCTCCCTTTTCTCGTTGCAACACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CAA 90 bp | TCCAAGTCACAGAGCAAGTCGGCAGCACCTCGCTGCGTCAAATGCTaGTATGTTGGAATCCAAAGCTATTTATGGGACTTGGGGCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SKSQSKSAAPRCVKC*YVGIQSYLWDLGPS Trigger: ACTGGGCCCCAAGTCCCATAAATAGCTTTGGATTCCAACATACAAGCATTTGACGCAGCGAGGTGCTGCCGACTTGCTCTGTGACTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CAA 90 bp | AACGAAGAGCACCAAGTACCCTTGCTCTGCTGTCCTGCCGGGCAGTaGTCCCGGGATCAGTGTTTTTGGTTGTTCTTTGTTTTAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: NEEHQVPLLCCPAGQ*SRDQCFWLFFVLAC Trigger: GCAAGCTAAAACAAAGAACAACCAAAAACACTGATCCCGGGACAACTGCCCGGCAGGACAGCAGAGCAAGGGTACTTGGTGCTCTTCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | CAACTGTTTTCTCTCCTGCTGTTGGTTAGTGGGACCTaGATGCAGACAGAGCTGGAAACCACAGGTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: QLFSLLLLVSGT*MQTELETTGLV Trigger: CACAAGACCTGTGGTTTCCAGCTCTGTCTGCATCCAGGTCCCACTAACCAACAGCAGGAGAGAAAACAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CAA 72 bp | AGTCGGCAGCACCTCGCTGCGTCAAATGCTTGTATGTaGGAATCCAAAGCTATTTATGGGACTTGGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SRQHLAASNACM*ESKAIYGTWGP Trigger: TGGGCCCCAAGTCCCATAAATAGCTTTGGATTCCAACATACAAGCATTTGACGCAGCGAGGTGCTGCCGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | TTGGGGGTTCAGCTTCTTCTTGGGAGAATCCAGCTCTaGGTGTTTCAGGAAATTTCTGACCTGCCAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LGVQLLLGRIQL*VFQEISDLPGF Trigger: GAAACCTGGCAGGTCAGAAATTTCCTGAAACACCCAGAGCTGGATTCTCCCAAGAAGAAGCTGAACCCCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CAA 90 bp | AACTTGCCCCAAGGTGGCACAGCTTCTAAGTGTCAGAGTCAACATTaGAACCTAGTCAGTCATATTTCAGGGGCAGTGGACCTGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: NLPQGGTASKCQSQH*NLVSHISGAVDLMA Trigger: AGCCATCAGGTCCACTGCCCCTGAAATATGACTGACTAGGTTCAAATGTTGACTCTGACACTTAGAAGCTGTGCCACCTTGGGGCAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | TTTCATTCTGTTGGCAGGGCTGGCGGTCTTTCTAAATaGGATATTTGTAGAGGTTTCCATCGCCCCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FHSVGRAGGLSK*DICRGFHRPRF Trigger: GAACCTGGGGCGATGGAAACCTCTACAAATATCCCATTTAGAAAGACCGCCAGCCCTGCCAACAGAATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CCA 72 bp | GTCAAATGCTTGTATGTTGGAATCCAAAGCTATTTATaGGACTTGGGGCCCAGTTGGGGCTTGTACACCCAA | + |
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Preference number: 6 (lower is better) Translates to: VKCLYVGIQSYL*DLGPSWGLYTQ Trigger: TTGGGTGTACAAGCCCCAACTGGGCCCCAAGTCCCATAAATAGCTTTGGATTCCAACATACAAGCATTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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| CDS CAA 72 bp | CAAGGTGGCACAGCTTCTAAGTGTCAGAGTCAACATTaGAACCTAGTCAGTCATATTTCAGGGGCAGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: QGGTASKCQSQH*NLVSHISGAVD Trigger: GTCCACTGCCCCTGAAATATGACTGACTAGGTTCAAATGTTGACTCTGACACTTAGAAGCTGTGCCACCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641325.1 |
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