RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02605 (Homo sapiens)

Ensembl gene IDs: ENSG00000261618

Ensembl transcript IDs: ENST00000565297.2

Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CACAAGCTCTCTTGCCTGCTGCCATGTAAGACTTCCCTTTGCTCTTaGTTTGTCTTCTGCCATGATTGTGAAGCCTCCCTAGCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: HKLSCLLPCKTSLCS*FVFCHDCEASLALR
Trigger: CCGCAGGGCTAGGGAGGCTTCACAATCATGGCAGAAGACAAAGCAAGAGCAAAGGGAAGTCTTACATGGCAGCAGGCAAGAGAGCTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 90 bp TCTGATGAGATGGGTTCCTGCAAGCTGCAGGCTTCAGTAAGTTGGTaGCCATCAACAGTATGCCTTCTCTCTTTCAAAGGCCCACAGGGT +
Preference number: 5 (lower is better)
Translates to: SDEMGSCKLQASVSW*PSTVCLLSFKGPQG
Trigger: ACCCTGTGGGCCTTTGAAAGAGAGAAGGCATACTGTTGATGGTCACCAACTTACTGAAGCCTGCAGCTTGCAGGAACCCATCTCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 90 bp GATGGTTTTATAAACAGGAGTTCCCCCTGCACAAGCTCTCTTGCCTaGTGCCATGTAAGACTTCCCTTTGCTCTTGCTTTGTCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: DGFINRSSPCTSSLA*CHVRLPFALALSSA
Trigger: GGCAGAAGACAAAGCAAGAGCAAAGGGAAGTCTTACATGGCAGCAGGCAAGAGAGCTTGTGCAGGGGGAACTCCTGTTTATAAAACCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 90 bp TTAGATATTTCTCCTAATGCTATCCCTCCACTAGGCCCTGGTGTGTaGTGTTCCCCTCTCTGTGTCCATGTCTTCTCACTGTTCAACTCC +
Preference number: 5 (lower is better)
Translates to: LDISPNAIPPLGPGV*CSPLCVHVFSLFNS
Trigger: GGAGTTGAACAGTGAGAAGACATGGACACAGAGAGGGGAACATCACACACCAGGGCCTAGTGGAGGGATAGCATTAGGAGAAATATCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 90 bp TGGGAAGTAACAGTGTGCATTCCAAACCTAGGCTTTAAGAAGCATTaGCTGCTTCCGCTCTCTTTCTCTCTGTTAGAACCCTCCTATGGC +
Preference number: 5 (lower is better)
Translates to: WEVTVCIPNLGFKKH*LLPLSFSLLEPSYG
Trigger: GCCATAGGAGGGTTCTAACAGAGAGAAAGAGAGCGGAAGCAGGCAATGCTTCTTAAAGCCTAGGTTTGGAATGCACACTGTTACTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 90 bp ACACATCTCCCAAGATCTGATGGTTTTATAAACAGGAGTTCCCCCTaGACAAGCTCTCTTGCCTGCTGCCATGTAAGACTTCCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: THLPRSDGFINRSSP*TSSLACCHVRLPFA
Trigger: AGCAAAGGGAAGTCTTACATGGCAGCAGGCAAGAGAGCTTGTGCAGGGGGAACTCCTGTTTATAAAACCATCAGATCTTGGGAGATGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 90 bp GTTTTCACTTGCTCTGTCCAATACCATACGTGGGAAGTAACAGTGTaGATTCCAAACCTAGGCTTTAAGAAGCATTGCCTGCTTCCGCTC +
Preference number: 5 (lower is better)
Translates to: VFTCSVQYHTWEVTV*IPNLGFKKHCLLPL
Trigger: GAGCGGAAGCAGGCAATGCTTCTTAAAGCCTAGGTTTGGAATGCACACTGTTACTTCCCACGTATGGTATTGGACAGAGCAAGTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 90 bp TTACCCCTTCCTGGATGCATACTCTTGGCACTAGGTGTTTTCACTTaGTCTGTCCAATACCATACGTGGGAAGTAACAGTGTGCATTCCA +
Preference number: 5 (lower is better)
Translates to: LPLPGCILLALGVFT*SVQYHTWEVTVCIP
Trigger: TGGAATGCACACTGTTACTTCCCACGTATGGTATTGGACAGAGCAAGTGAAAACACCTAGTGCCAAGAGTATGCATCCAGGAAGGGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 90 bp TTTAATTATCTCAGTAGAGTTACTTCAAAGCCCATTGTTGCCTTTTaGCTTTCCTCCTCTATCGTTCCTTCAGCTGAGAGACAGCACCAT +
Preference number: 5 (lower is better)
Translates to: FNYLSRVTSKPIVAF*LSSSIVPSAERQHH
Trigger: ATGGTGCTGTCTCTCAGCTGAAGGAACGATAGAGGAGGAAAGGCAAAAGGCAACAATGGGCTTTGAAGTAACTCTACTGAGATAATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 90 bp CGTGCAGGTTTGTTACATAGGTATACAACAATACCTATGGTGCCATaGTGGTTTGCTGCACCCATCAACCCATCATATACATTAGATATT +
Preference number: 5 (lower is better)
Translates to: RAGLLHRYTTIPMVP*WFAAPINPSYTLDI
Trigger: AATATCTAATGTATATGATGGGTTGATGGGTGCAGCAAACCACCATGGCACCATAGGTATTGTTGTATACCTATGTAACAAACCTGCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 90 bp GGTTCTAGATCCTTGAGGAATCGTCACACTGTCTTCCACAATGGTTaGACTAATTTACGCTCCCATCAACAATGTAAAAGTGTTCCTATT +
Preference number: 5 (lower is better)
Translates to: GSRSLRNRHTVFHNG*TNLRSHQQCKSVPI
Trigger: AATAGGAACACTTTTACATTGTTGATGGGAGCGTAAATTAGTTCAACCATTGTGGAAGACAGTGTGACGATTCCTCAAGGATCTAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 90 bp GCAGGTTTGTTACATAGGTATACAACAATACCTATGGTGCCATGGTaGTTTGCTGCACCCATCAACCCATCATATACATTAGATATTTCT +
Preference number: 5 (lower is better)
Translates to: AGLLHRYTTIPMVPW*FAAPINPSYTLDIS
Trigger: AGAAATATCTAATGTATATGATGGGTTGATGGGTGCAGCAAACCACCATGGCACCATAGGTATTGTTGTATACCTATGTAACAAACCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 90 bp GTAATGGTATTGCTTGGTCAAATGATATCTCTGGTTCTAGATCCTTaGGGAATCGTCACACTGTCTTCCACAATGGTTGAACTAATTTAC +
Preference number: 5 (lower is better)
Translates to: VMVLLGQMISLVLDP*GIVTLSSTMVELIY
Trigger: GTAAATTAGTTCAACCATTGTGGAAGACAGTGTGACGATTCCTCAAGGATCTAGAACCAGAGATATCATTTGACCAAGCAATACCATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 90 bp AATTATTTATACTCCTTTGGGTATATACCCAGTAATGGTATTGCTTaGTCAAATGATATCTCTGGTTCTAGATCCTTGAGGAATCGTCAC +
Preference number: 5 (lower is better)
Translates to: NYLYSFGYIPSNGIA*SNDISGSRSLRNRH
Trigger: GTGACGATTCCTCAAGGATCTAGAACCAGAGATATCATTTGACCAAGCAATACCATTACTGGGTATATACCCAAAGGAGTATAAATAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 72 bp TCTCCTAATGCTATCCCTCCACTAGGCCCTGGTGTGTaGTGTTCCCCTCTCTGTGTCCATGTCTTCTCACTG +
Preference number: 6 (lower is better)
Translates to: SPNAIPPLGPGV*CSPLCVHVFSL
Trigger: CAGTGAGAAGACATGGACACAGAGAGGGGAACATCACACACCAGGGCCTAGTGGAGGGATAGCATTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 72 bp CATCTTATACTCCCAGCACCCATCCAACAAGGCAGCTaGCTGTCCACAGGTGAGTGGGCCAAGTCAATGTCT +
Preference number: 6 (lower is better)
Translates to: HLILPAPIQQGS*LSTGEWAKSMS
Trigger: AGACATTGACTTGGCCCACTCACCTGTGGACAGTCAGCTGCCTTGTTGGATGGGTGCTGGGAGTATAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 72 bp GGACAGAGACAAGTGGAGATAATGGCATCATGGGGGTaGTTTCCCCCACACTGTTCTCATCGTATTGAACAC +
Preference number: 6 (lower is better)
Translates to: GQRQVEIMASWG*FPPHCSHRIEH
Trigger: GTGTTCAATACGATGAGAACAGTGTGGGGGAAACCACCCCCATGATGCCATTATCTCCACTTGTCTCTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp GACTGTCCACAGGTGAGTGGGCCAAGTCAATGTCTTTaGAACTTGGCCCAGATCAGCAAAAACAGTGGCTTG +
Preference number: 6 (lower is better)
Translates to: DCPQVSGPSQCL*NLAQISKNSGL
Trigger: CAAGCCACTGTTTTTGCTGATCTGGGCCAAGTTCAAAAGACATTGACTTGGCCCACTCACCTGTGGACAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 72 bp GAGAGAACTTCTAGAGAACAGCCAAGCAGTCCTAACTaGGGCCATCTTATACTCCCAGCACCCATCCAACAA +
Preference number: 6 (lower is better)
Translates to: ERTSREQPSSPN*GHLILPAPIQQ
Trigger: TTGTTGGATGGGTGCTGGGAGTATAAGATGGCCTCAGTTAGGACTGCTTGGCTGTTCTCTAGAAGTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 72 bp TCTTGCCTGCTGCCATGTAAGACTTCCCTTTGCTCTTaGTTTGTCTTCTGCCATGATTGTGAAGCCTCCCTA +
Preference number: 6 (lower is better)
Translates to: SCLLPCKTSLCS*FVFCHDCEASL
Trigger: TAGGGAGGCTTCACAATCATGGCAGAAGACAAAGCAAGAGCAAAGGGAAGTCTTACATGGCAGCAGGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 72 bp TTTTATAAACAGGAGTTCCCCCTGCACAAGCTCTCTTaGCTGCTGCCATGTAAGACTTCCCTTTGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: FYKQEFPLHKLS*LLPCKTSLCSC
Trigger: GCAAGAGCAAAGGGAAGTCTTACATGGCAGCAGGCAAGAGAGCTTGTGCAGGGGGAACTCCTGTTTATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 72 bp TGTCAAGGACAGAGACAAGTGGAGATAATGGCATCATaGGGGTGGTTTCCCCCACACTGTTCTCATCGTATT +
Preference number: 6 (lower is better)
Translates to: CQGQRQVEIMAS*GWFPPHCSHRI
Trigger: AATACGATGAGAACAGTGTGGGGGAAACCACCCCCATGATGCCATTATCTCCACTTGTCTCTGTCCTTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp TTTACCCCTTCCTGGATGCATACTCTTGGCACTAGGTGTTTTCACTaGCTCTGTCCAATACCATACGTGGGAAGTAACAGTGTGCATTCC +
Preference number: 6 (lower is better)
Translates to: FTPSWMHTLGTRCFH*LCPIPYVGSNSVHS
Trigger: GGAATGCACACTGTTACTTCCCACGTATGGTATTGGACAGAGCAAGTGAAAACACCTAGTGCCAAGAGTATGCATCCAGGAAGGGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 72 bp CCAAGATCTGATGGTTTTATAAACAGGAGTTCCCCCTaGACAAGCTCTCTTGCCTGCTGCCATGTAAGACTT +
Preference number: 6 (lower is better)
Translates to: PRSDGFINRSSP*TSSLACCHVRL
Trigger: AAGTCTTACATGGCAGCAGGCAAGAGAGCTTGTGCAGGGGGAACTCCTGTTTATAAAACCATCAGATCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 72 bp TCCATGTCTTCTCACTGTTCAACTCCCACTTATGAGTaGGAACATGCGGTATCTGGTTTTCTGTTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: SMSSHCSTPTYE*EHAVSGFLFLS
Trigger: AGACAGGAACAGAAAACCAGATACCGCATGTTCTCACTCATAAGTGGGAGTTGAACAGTGAGAAGACATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 72 bp AATTCCCCAGTCTCAGGTATGTCTTTGTTAGCGATGTaGGAACAGACTAATACAGTGGATGACGCACTTGGA +
Preference number: 6 (lower is better)
Translates to: NSPVSGMSLLAM*EQTNTVDDALG
Trigger: TCCAAGTGCGTCATCCACTGTATTAGTCTGTTCTCACATCGCTAACAAAGACATACCTGAGACTGGGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 72 bp CAGGTTTGTTACATAGGTATACAACAATACCTATGGTaGCATGGTGGTTTGCTGCACCCATCAACCCATCAT +
Preference number: 6 (lower is better)
Translates to: QVCYIGIQQYLW*HGGLLHPSTHH
Trigger: ATGATGGGTTGATGGGTGCAGCAAACCACCATGGCACCATAGGTATTGTTGTATACCTATGTAACAAACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp ATGAGTGAGAACATGCGGTATCTGGTTTTCTGTTCCTGTCTTAGCTaGCTGAGAATGATGGTTTCCAGCTTCATCCATGTCCTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: MSENMRYLVFCSCLS*LRMMVSSFIHVLSK
Trigger: CTTTGAAAGGACATGGATGAAGCTGGAAACCATCATTCTCAGCAAGCTAAGACAGGAACAGAAAACCAGATACCGCATGTTCTCACTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp CGATGTGAGAACAGACTAATACAGTGGATGACGCACTaGGAATTCTCCAAGTTATTTAGCTGGGGGATAAAG +
Preference number: 6 (lower is better)
Translates to: RCENRLIQWMTH*EFSKLFSWGIK
Trigger: CTTTATCCCCCAGCTAAATAACTTGGAGAATTCCAAGTGCGTCATCCACTGTATTAGTCTGTTCTCACATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp TGTGGTCTTTTAATTATCTCAGTAGAGTTACTTCAAAGCCCATTGTaGCCTTTTGCCTTTCCTCCTCTATCGTTCCTTCAGCTGAGAGAC +
Preference number: 6 (lower is better)
Translates to: CGLLIISVELLQSPL*PFAFPPLSFLQLRD
Trigger: GTCTCTCAGCTGAAGGAACGATAGAGGAGGAAAGGCAAAAGGCAACAATGGGCTTTGAAGTAACTCTACTGAGATAATTAAAAGACCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 72 bp TTGCTTGGTCAAATGATATCTCTGGTTCTAGATCCTTaGGGAATCGTCACACTGTCTTCCACAATGGTTGAA +
Preference number: 6 (lower is better)
Translates to: LLGQMISLVLDP*GIVTLSSTMVE
Trigger: TTCAACCATTGTGGAAGACAGTGTGACGATTCCTCAAGGATCTAGAACCAGAGATATCATTTGACCAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 72 bp CCATTTATTTGTGTCCTCTCTTATTTGCTTGGTCAGTaGTTTGCAGTTCTCCTTAAAGAGGTCCTTCACATC +
Preference number: 6 (lower is better)
Translates to: PFICVLSYLLGQ*FAVLLKEVLHI
Trigger: GATGTGAAGGACCTCTTTAAGGAGAACTGCAAACCACTGACCAAGCAAATAAGAGAGGACACAAATAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 72 bp TTGTTACATAGGTATACAACAATACCTATGGTGCCATaGTGGTTTGCTGCACCCATCAACCCATCATATACA +
Preference number: 6 (lower is better)
Translates to: LLHRYTTIPMVP*WFAAPINPSYT
Trigger: TGTATATGATGGGTTGATGGGTGCAGCAAACCACCATGGCACCATAGGTATTGTTGTATACCTATGTAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp TTATTTGTGTCCTCTCTTATTTGCTTGGTCAGTGGTTaGCAGTTCTCCTTAAAGAGGTCCTTCACATCCCTT +
Preference number: 6 (lower is better)
Translates to: LFVSSLICLVSG*QFSLKRSFTSL
Trigger: AAGGGATGTGAAGGACCTCTTTAAGGAGAACTGCAAACCACTGACCAAGCAAATAAGAGAGGACACAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp CTCTGCCTTGGCTCAGAAGGCATATCACTTCTGCTCACAATTATTTaGGCTGGTATTAGTTATATGTGTCTCCAATTCCAGCATTACTCT +
Preference number: 6 (lower is better)
Translates to: LCLGSEGISLLLTII*AGISYMCLQFQHYS
Trigger: AGAGTAATGCTGGAATTGGAGACACATATAACTAATACCAGCCAAAATAATTGTGAGCAGAAGTGATATGCCTTCTGAGCCAAGGCAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp AGGATGAGAAGAGGTCTGAGAATCACATATAATCTTTTCTCTGCCTaGGCTCAGAAGGCATATCACTTCTGCTCACAATTATTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: RMRRGLRITYNLFSA*AQKAYHFCSQLFWL
Trigger: CAGCCAAAATAATTGTGAGCAGAAGTGATATGCCTTCTGAGCCAAGGCAGAGAAAAGATTATATGTGATTCTCAGACCTCTTCTCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp TTATGTGGTCTTTTAATTATCTCAGTAGAGTTACTTCAAAGCCCATaGTTGCCTTTTGCCTTTCCTCCTCTATCGTTCCTTCAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: LCGLLIISVELLQSP*LPFAFPPLSFLQLR
Trigger: TCTCAGCTGAAGGAACGATAGAGGAGGAAAGGCAAAAGGCAACAATGGGCTTTGAAGTAACTCTACTGAGATAATTAAAAGACCACATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 72 bp GTATACAACAATACCTATGGTGCCATGGTGGTTTGCTaGACCCATCAACCCATCATATACATTAGATATTTC +
Preference number: 6 (lower is better)
Translates to: VYNNTYGAMVVC*THQPIIYIRYF
Trigger: GAAATATCTAATGTATATGATGGGTTGATGGGTGCAGCAAACCACCATGGCACCATAGGTATTGTTGTATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 72 bp TACTCCTTTGGGTATATACCCAGTAATGGTATTGCTTaGTCAAATGATATCTCTGGTTCTAGATCCTTGAGG +
Preference number: 6 (lower is better)
Translates to: YSFGYIPSNGIA*SNDISGSRSLR
Trigger: CCTCAAGGATCTAGAACCAGAGATATCATTTGACCAAGCAATACCATTACTGGGTATATACCCAAAGGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 72 bp TTCTTCATCCAGCCTATCATTGATGAGCATTTGGGTTaGTTCCAAGTCATTGCTATTGTGAATAGTGCTGTA +
Preference number: 6 (lower is better)
Translates to: FFIQPIIDEHLG*FQVIAIVNSAV
Trigger: TACAGCACTATTCACAATAGCAATGACTTGGAACCAACCCAAATGCTCATCAATGATAGGCTGGATGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CCA 72 bp TTACATAGGTATACAACAATACCTATGGTGCCATGGTaGTTTGCTGCACCCATCAACCCATCATATACATTA +
Preference number: 6 (lower is better)
Translates to: LHRYTTIPMVPW*FAAPINPSYTL
Trigger: TAATGTATATGATGGGTTGATGGGTGCAGCAAACCACCATGGCACCATAGGTATTGTTGTATACCTATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp TTAATTATCTCAGTAGAGTTACTTCAAAGCCCATTGTaGCCTTTTGCCTTTCCTCCTCTATCGTTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: LIISVELLQSPL*PFAFPPLSFLQ
Trigger: CTGAAGGAACGATAGAGGAGGAAAGGCAAAAGGCAACAATGGGCTTTGAAGTAACTCTACTGAGATAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp GGCTCAGAAGGCATATCACTTCTGCTCACAATTATTTaGGCTGGTATTAGTTATATGTGTCTCCAATTCCAG +
Preference number: 6 (lower is better)
Translates to: GSEGISLLLTII*AGISYMCLQFQ
Trigger: CTGGAATTGGAGACACATATAACTAATACCAGCCAAAATAATTGTGAGCAGAAGTGATATGCCTTCTGAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp AGAGGTCTGAGAATCACATATAATCTTTTCTCTGCCTaGGCTCAGAAGGCATATCACTTCTGCTCACAATTA +
Preference number: 6 (lower is better)
Translates to: RGLRITYNLFSA*AQKAYHFCSQL
Trigger: TAATTGTGAGCAGAAGTGATATGCCTTCTGAGCCAAGGCAGAGAAAAGATTATATGTGATTCTCAGACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp TATATGGGCCACATTTTCTTCATCCAGCCTATCATTGATGAGCATTaGGGTTGGTTCCAAGTCATTGCTATTGTGAATAGTGCTGTAATA +
Preference number: 6 (lower is better)
Translates to: YMGHIFFIQPIIDEH*GWFQVIAIVNSAVI
Trigger: TATTACAGCACTATTCACAATAGCAATGACTTGGAACCAACCCAAATGCTCATCAATGATAGGCTGGATGAAGAAAATGTGGCCCATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp ATGTGTCTCCAATTCCAGCATTACTCTCCTTGCCAATCTCTCAAATaGGCAAAGGAAATAAAGAAGAAAAAGGAAGGAAAAGCAAGCAAG +
Preference number: 6 (lower is better)
Translates to: MCLQFQHYSPCQSLK*AKEIKKKKEGKASK
Trigger: CTTGCTTGCTTTTCCTTCCTTTTTCTTCTTTATTTCCTTTGCCAATTTGAGAGATTGGCAAGGAGAGTAATGCTGGAATTGGAGACACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 72 bp GTTTTAGTCATGAAGTCTTTGCCCATGCCTGTGTTCTaGATGGCATTGCCTAAATTTTCTTCAAGGGATTTT +
Preference number: 6 (lower is better)
Translates to: VLVMKSLPMPVF*MALPKFSSRDF
Trigger: AAAATCCCTTGAAGAAAATTTAGGCAATGCCATTCAGAACACAGGCATGGGCAAAGACTTCATGACTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 72 bp CTATGCAGCTTAGTGTTGATTCCATTCTCACAACTCTaGCATACAAAGATAAGCTATGACTGTTTCCATTCA +
Preference number: 6 (lower is better)
Translates to: LCSLVLIPFSQL*HTKISYDCFHS
Trigger: TGAATGGAAACAGTCATAGCTTATCTTTGTATGGCAGAGTTGTGAGAATGGAATCAACACTAAGCTGCATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp CACATTTTCTTCATCCAGCCTATCATTGATGAGCATTaGGGTTGGTTCCAAGTCATTGCTATTGTGAATAGT +
Preference number: 6 (lower is better)
Translates to: HIFFIQPIIDEH*GWFQVIAIVNS
Trigger: ACTATTCACAATAGCAATGACTTGGAACCAACCCAAATGCTCATCAATGATAGGCTGGATGAAGAAAATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp TTTTTCCATTTATTTGTGTCCTCTCTTATTTGCTTGGTCAGTGGTTaGCAGTTCTCCTTAAAGAGGTCCTTCACATCCCTTGATAGAAAA +
Preference number: 6 (lower is better)
Translates to: FFHLFVSSLICLVSG*QFSLKRSFTSLDRK
Trigger: TTTTCTATCAAGGGATGTGAAGGACCTCTTTAAGGAGAACTGCAAACCACTGACCAAGCAAATAAGAGAGGACACAAATAAATGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 72 bp TTCACGAAGGGAGTAGGATTCTTAGTGTTGAATTCCTaGAGTAAGATACGTTTTCCTTCTTTTATGTGGTCT +
Preference number: 6 (lower is better)
Translates to: FTKGVGFLVLNS*SKIRFPSFMWS
Trigger: AGACCACATAAAAGAAGGAAAACGTATCTTACTTCAGGAATTCAACACTAAGAATCCTACTCCCTTCGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS GCA 72 bp AGTTATATGTGTCTCCAATTCCAGCATTACTCTCCTTaGCAATCTCTCAAATTGGCAAAGGAAATAAAGAAG +
Preference number: 6 (lower is better)
Translates to: SYMCLQFQHYSP*QSLKLAKEIKK
Trigger: CTTCTTTATTTCCTTTGCCAATTTGAGAGATTGGCAAGGAGAGTAATGCTGGAATTGGAGACACATATAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp CAAGATTCTGAAGACAAGTATCTATGCAGCTTAGTGTaGATTCCATTCTCACAACTCTGCCATACAAAGATA +
Preference number: 6 (lower is better)
Translates to: QDSEDKYLCSLV*IPFSQLCHTKI
Trigger: TATCTTTGTATGGCAGAGTTGTGAGAATGGAATCAACACTAAGCTGCATAGATACTTGTCTTCAGAATCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 90 bp GCTAAAAATCAAGATTCTGAAGACAAGTATCTATGCAGCTTAGTGTaGATTCCATTCTCACAACTCTGCCATACAAAGATAAGCTATGAC +
Preference number: 6 (lower is better)
Translates to: AKNQDSEDKYLCSLV*IPFSQLCHTKISYD
Trigger: GTCATAGCTTATCTTTGTATGGCAGAGTTGTGAGAATGGAATCAACACTAAGCTGCATAGATACTTGTCTTCAGAATCTTGATTTTTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS TCA 72 bp TATGGCCATTTTCACGATATTGATTCTTCCTATCCATaGGCATGGAATGTTTTTCCATTTATTTGTGTCCTC +
Preference number: 6 (lower is better)
Translates to: YGHFHDIDSSYP*AWNVFPFICVL
Trigger: GAGGACACAAATAAATGGAAAAACATTCCATGCTCATGGATAGGAAGAATCAATATCGTGAAAATGGCCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp TACCATTTATTAAATAGGGAATCCTTTCCCCATTGCTaGTTTTTGTCAGCTTTGTCAAAGATCAGATGGTTG +
Preference number: 6 (lower is better)
Translates to: YHLLNRESFPHC*FLSALSKIRWL
Trigger: CAACCATCTGATCTTTGACAAAGCTGACAAAAACAAGCAATGGGGAAAGGATTCCCTATTTAATAAATGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565297.2
CDS CAA 72 bp ATTTATACTCCTTTGGGTATATACCCAGTAATGGTATaGCTTGGTCAAATGATATCTCTGGTTCTAGATCCT +
Preference number: 6 (lower is better)
Translates to: IYTPLGIYPVMV*LGQMISLVLDP
Trigger: AGGATCTAGAACCAGAGATATCATTTGACCAAGCAATACCATTACTGGGTATATACCCAAAGGAGTATAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565297.2