Pregenerated sensors for LINC02595 (Homo sapiens)
Ensembl gene IDs: ENSG00000231566Ensembl transcript IDs: ENST00000456532.2, ENST00000666464.1, ENST00000667331.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCGCTGTTGCAGTCTCCAGCTGCAGGAGGAAGAGGCGCGGCGGCTaGGCCCCCGGACTCCACGCGCCTACTCGCGCCCCGGAGCGGTGG | + |
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Preference number: 5 (lower is better) Translates to: AAVAVSSCRRKRRGG*APGLHAPTRAPERW Trigger: CCACCGCTCCGGGGCGCGAGTAGGCGCGTGGAGTCCGGGGGCTCAGCCGCCGCGCCTCTTCCTCCTGCAGCTGGAGACTGCAACAGCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456532.2 ENST00000666464.1 |
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| CDS GCA 90 bp | ACCTGCGCGCAGGGTCGTCGCTGCTGCCGGTGCACCCGCCGCTGTTaGAGTCTCCAGCTGCAGGAGGAAGAGGCGCGGCGGCTGAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: TCAQGRRCCRCTRRC*SLQLQEEEARRLSP Trigger: GGGGCTCAGCCGCCGCGCCTCTTCCTCCTGCAGCTGGAGACTGCAACAGCGGCGGGTGCACCGGCAGCAGCGACGACCCTGCGCGCAGGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456532.2 ENST00000666464.1 |
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| CDS CCA 90 bp | CGCTCTCAACCCCGAACACGCTCTGGACTATCCCAAGAGGGTCTTTaGGGACCCGCCAGAGATCGATACTGCTCCCACGTGCCTCCATTA | + |
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Preference number: 5 (lower is better) Translates to: RSQPRTRSGLSQEGL*GPARDRYCSHVPPL Trigger: TAATGGAGGCACGTGGGAGCAGTATCGATCTCTGGCGGGTCCCCAAAGACCCTCTTGGGATAGTCCAGAGCGTGTTCGGGGTTGAGAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS CCA 90 bp | TTCACACGGAACACTCTCCTTTCGCTCTCAACCCCGAACACGCTCTaGACTATCCCAAGAGGGTCTTTGGGGACCCGCCAGAGATCGATA | + |
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Preference number: 5 (lower is better) Translates to: FTRNTLLSLSTPNTL*TIPRGSLGTRQRSI Trigger: TATCGATCTCTGGCGGGTCCCCAAAGACCCTCTTGGGATAGTCCAGAGCGTGTTCGGGGTTGAGAGCGAAAGGAGAGTGTTCCGTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS GCA 90 bp | GGACTATCCCAAGAGGGTCTTTGGGGACCCGCCAGAGATCGATACTaGTCCCACGTGCCTCCATTAAACCCTTGTCCAAACATGCACAAG | + |
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Preference number: 5 (lower is better) Translates to: GLSQEGLWGPARDRY*SHVPPLNPCPNMHK Trigger: CTTGTGCATGTTTGGACAAGGGTTTAATGGAGGCACGTGGGAGCAGTATCGATCTCTGGCGGGTCCCCAAAGACCCTCTTGGGATAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS GCA 90 bp | CACCACAACCAGCACTGTGATAATTGTGCACCCCATCCCACCCGTTaGATCTGCACAAAGAGAAAGCTTCATTCTCTTGAGCGGCCATTT | + |
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Preference number: 5 (lower is better) Translates to: HHNQHCDNCAPHPTR*ICTKRKLHSLERPF Trigger: AAATGGCCGCTCAAGAGAATGAAGCTTTCTCTTTGTGCAGATGCAACGGGTGGGATGGGGTGCACAATTATCACAGTGCTGGTTGTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456532.2 |
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| CDS GCA 90 bp | TCCATTAAACCCTTGTCCAAACATGCACAAGGCGCCAAGGGCATGTaGAGAATCAGCCCTCAGAGTAAGTTCAGCAAACCCATTCCCTAC | + |
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Preference number: 5 (lower is better) Translates to: SIKPLSKHAQGAKGM*RISPQSKFSKPIPY Trigger: GTAGGGAATGGGTTTGCTGAACTTACTCTGAGGGCTGATTCTGCACATGCCCTTGGCGCCTTGTGCATGTTTGGACAAGGGTTTAATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS TCA 90 bp | TGCATCTGCACAAAGAGAAAGCTTCATTCTCTTGAGCGGCCATTTTaGTGCCTGACCCTTAACACGGCCAGCACAATAACTTTAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: CICTKRKLHSLERPF*CLTLNTASTITLAS Trigger: GGATGCTAAAGTTATTGTGCTGGCCGTGTTAAGGGTCAGGCATCAAAATGGCCGCTCAAGAGAATGAAGCTTTCTCTTTGTGCAGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456532.2 |
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| CDS CAA 90 bp | CACCTGCGCGCAGGGTCGTCGCTGCTGCCGGTGCACCCGCCGCTGTaGCAGTCTCCAGCTGCAGGAGGAAGAGGCGCGGCGGCTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: HLRAGSSLLPVHPPL*QSPAAGGRGAAAEP Trigger: GGGCTCAGCCGCCGCGCCTCTTCCTCCTGCAGCTGGAGACTGCAACAGCGGCGGGTGCACCGGCAGCAGCGACGACCCTGCGCGCAGGTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456532.2 ENST00000666464.1 |
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| CDS CCA 72 bp | CCCGGACTCCACGCGCCTACTCGCGCCCCGGAGCGGTaGTCCTCATTTCCCTTCGTCCCGGCTGGCGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PGLHAPTRAPER*SSFPFVPAGEP Trigger: TGGCTCGCCAGCCGGGACGAAGGGAAATGAGGACCACCGCTCCGGGGCGCGAGTAGGCGCGTGGAGTCCGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000456532.2 ENST00000666464.1 |
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| CDS GCA 72 bp | ACTGCCACCTGCGCGCAGGGTCGTCGCTGCTGCCGGTaGACCCGCCGCTGTTGCAGTCTCCAGCTGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TATCAQGRRCCR*TRRCCSLQLQE Trigger: CTCCTGCAGCTGGAGACTGCAACAGCGGCGGGTGCACCGGCAGCAGCGACGACCCTGCGCGCAGGTGGCAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456532.2 ENST00000666464.1 |
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| CDS CCA 72 bp | CCCGGAGCGGTGGTCCTCATTTCCCTTCGTCCCGGCTaGCGAGCCACCCACCTCGCCCGCAGGTTCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PGAVVLISLRPG*RATHLARRFCQ Trigger: CTGGCAGAACCTGCGGGCGAGGTGGGTGGCTCGCCAGCCGGGACGAAGGGAAATGAGGACCACCGCTCCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456532.2 |
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| CDS GCA 72 bp | GGCTTCTACACTGCCACCTGCGCGCAGGGTCGTCGCTaGTGCCGGTGCACCCGCCGCTGTTGCAGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GFYTATCAQGRR*CRCTRRCCSLQ Trigger: CTGGAGACTGCAACAGCGGCGGGTGCACCGGCAGCAGCGACGACCCTGCGCGCAGGTGGCAGTGTAGAAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456532.2 ENST00000666464.1 |
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| CDS GCA 72 bp | TTCTACACTGCCACCTGCGCGCAGGGTCGTCGCTGCTaGCGGTGCACCCGCCGCTGTTGCAGTCTCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: FYTATCAQGRRC*RCTRRCCSLQL Trigger: CAGCTGGAGACTGCAACAGCGGCGGGTGCACCGGCAGCAGCGACGACCCTGCGCGCAGGTGGCAGTGTAGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456532.2 ENST00000666464.1 |
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| CDS TCA 72 bp | CCCATTCCCTACCCCCGAAAGCGCGAGGGAGCACCCTaGCGCAAGCGCCGGCCCCGGCAGACAATACTCAAG | + |
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Preference number: 6 (lower is better) Translates to: PIPYPRKREGAP*RKRRPRQTILK Trigger: CTTGAGTATTGTCTGCCGGGGCCGGCGCTTGCGTCAGGGTGCTCCCTCGCGCTTTCGGGGGTAGGGAATGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS CCA 72 bp | CCCCGAACACGCTCTGGACTATCCCAAGAGGGTCTTTaGGGACCCGCCAGAGATCGATACTGCTCCCACGTG | + |
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Preference number: 6 (lower is better) Translates to: PRTRSGLSQEGL*GPARDRYCSHV Trigger: CACGTGGGAGCAGTATCGATCTCTGGCGGGTCCCCAAAGACCCTCTTGGGATAGTCCAGAGCGTGTTCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS CCA 72 bp | GACTCTTTCAGAAACCACTTCTGGAAGCTCCCGGTCTaGCTTCTACACTGCCACCTGCGCGCAGGGTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: DSFRNHFWKLPV*LLHCHLRAGSS Trigger: CGACGACCCTGCGCGCAGGTGGCAGTGTAGAAGCCAGACCGGGAGCTTCCAGAAGTGGTTTCTGAAAGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000456532.2 ENST00000666464.1 |
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| CDS CAA 72 bp | ACCCCGAACACGCTCTGGACTATCCCAAGAGGGTCTTaGGGGACCCGCCAGAGATCGATACTGCTCCCACGT | + |
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Preference number: 6 (lower is better) Translates to: TPNTLWTIPRGS*GTRQRSILLPR Trigger: ACGTGGGAGCAGTATCGATCTCTGGCGGGTCCCCAAAGACCCTCTTGGGATAGTCCAGAGCGTGTTCGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS CAA 90 bp | TCGCTCTCAACCCCGAACACGCTCTGGACTATCCCAAGAGGGTCTTaGGGGACCCGCCAGAGATCGATACTGCTCCCACGTGCCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: SLSTPNTLWTIPRGS*GTRQRSILLPRASI Trigger: AATGGAGGCACGTGGGAGCAGTATCGATCTCTGGCGGGTCCCCAAAGACCCTCTTGGGATAGTCCAGAGCGTGTTCGGGGTTGAGAGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS CCA 72 bp | AACACTCTCCTTTCGCTCTCAACCCCGAACACGCTCTaGACTATCCCAAGAGGGTCTTTGGGGACCCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: NTLLSLSTPNTL*TIPRGSLGTRQ Trigger: CTGGCGGGTCCCCAAAGACCCTCTTGGGATAGTCCAGAGCGTGTTCGGGGTTGAGAGCGAAAGGAGAGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS CAA 90 bp | ACCCGCCAGAGATCGATACTGCTCCCACGTGCCTCCATTAAACCCTaGTCCAAACATGCACAAGGCGCCAAGGGCATGTGCAGAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: TRQRSILLPRASIKP*SKHAQGAKGMCRIS Trigger: GCTGATTCTGCACATGCCCTTGGCGCCTTGTGCATGTTTGGACAAGGGTTTAATGGAGGCACGTGGGAGCAGTATCGATCTCTGGCGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS GCA 72 bp | CAAGAGGGTCTTTGGGGACCCGCCAGAGATCGATACTaGTCCCACGTGCCTCCATTAAACCCTTGTCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: QEGLWGPARDRY*SHVPPLNPCPN Trigger: GTTTGGACAAGGGTTTAATGGAGGCACGTGGGAGCAGTATCGATCTCTGGCGGGTCCCCAAAGACCCTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS GCA 72 bp | CCCTTGTCCAAACATGCACAAGGCGCCAAGGGCATGTaGAGAATCAGCCCTCAGAGTAAGTTCAGCAAACCC | + |
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Preference number: 6 (lower is better) Translates to: PLSKHAQGAKGM*RISPQSKFSKP Trigger: GGGTTTGCTGAACTTACTCTGAGGGCTGATTCTGCACATGCCCTTGGCGCCTTGTGCATGTTTGGACAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS CAA 72 bp | AGATCGATACTGCTCCCACGTGCCTCCATTAAACCCTaGTCCAAACATGCACAAGGCGCCAAGGGCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: RSILLPRASIKP*SKHAQGAKGMC Trigger: GCACATGCCCTTGGCGCCTTGTGCATGTTTGGACAAGGGTTTAATGGAGGCACGTGGGAGCAGTATCGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667331.1 |
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| CDS GCA 72 bp | TGTGATAATTGTGCACCCCATCCCACCCGTTGCATCTaGACAAAGAGAAAGCTTCATTCTCTTGAGCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: CDNCAPHPTRCI*TKRKLHSLERP Trigger: TGGCCGCTCAAGAGAATGAAGCTTTCTCTTTGTGCAGATGCAACGGGTGGGATGGGGTGCACAATTATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456532.2 |
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| CDS GCA 72 bp | CAGCACTGTGATAATTGTGCACCCCATCCCACCCGTTaGATCTGCACAAAGAGAAAGCTTCATTCTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: QHCDNCAPHPTR*ICTKRKLHSLE Trigger: CTCAAGAGAATGAAGCTTTCTCTTTGTGCAGATGCAACGGGTGGGATGGGGTGCACAATTATCACAGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456532.2 |
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| CDS GCA 72 bp | CGACTGTGTGGGACTACAGGTACACATAGCTACAGGTaGACATCACCACGCCTGGCTACTTTTTGTAATTTT | + |
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Preference number: 6 (lower is better) Translates to: RLCGTTGTHSYR*TSPRLATFCNF Trigger: AAAATTACAAAAAGTAGCCAGGCGTGGTGATGTGCACCTGTAGCTATGTGTACCTGTAGTCCCACACAGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000456532.2 |
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| CDS TCA 72 bp | ACAAAGAGAAAGCTTCATTCTCTTGAGCGGCCATTTTaGTGCCTGACCCTTAACACGGCCAGCACAATAACT | + |
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Preference number: 6 (lower is better) Translates to: TKRKLHSLERPF*CLTLNTASTIT Trigger: AGTTATTGTGCTGGCCGTGTTAAGGGTCAGGCATCAAAATGGCCGCTCAAGAGAATGAAGCTTTCTCTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456532.2 |
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| CDS CAA 72 bp | TGTCCTACATACCTGTGGTTTTTCAGATTCCTGTGCTaGCTTACTCATGTACATTTGACTCTTTCAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: CPTYLWFFRFLC*LTHVHLTLSET Trigger: GGTTTCTGAAAGAGTCAAATGTACATGAGTAAGCAAGCACAGGAATCTGAAAAACCACAGGTATGTAGGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666464.1 |
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