Pregenerated sensors for LINC02587 (Homo sapiens)
Ensembl gene IDs: ENSG00000229108Ensembl transcript IDs: ENST00000442176.1, ENST00000663069.1
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTCTTTTTCCCCCTGCTGTGGGATCTTGGAGACACATGCTGAGATaGCTGATTCACAACGCCAACTGCTGCCTGGAGAGCCAACCATCT | + |
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Preference number: 5 (lower is better) Translates to: PLFPPAVGSWRHMLR*LIHNANCCLESQPS Trigger: AGATGGTTGGCTCTCCAGGCAGCAGTTGGCGTTGTGAATCAGTCATCTCAGCATGTGTCTCCAAGATCCCACAGCAGGGGGAAAAAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS TCA 90 bp | GGTCCTCTCTCAGGTATGCATGGCTTTGTTCTGGTCCATGAGCTGTaGGCAGAAATGGCACCTACCACCTCTGCCTCAAAGTATGTAACA | + |
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Preference number: 5 (lower is better) Translates to: GPLSGMHGFVLVHEL*AEMAPTTSASKYVT Trigger: TGTTACATACTTTGAGGCAGAGGTGGTAGGTGCCATTTCTGCTCACAGCTCATGGACCAGAACAAAGCCATGCATACCTGAGAGAGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS TCA 90 bp | ATTTTCTGGTCCTCTCTCAGGTATGCATGGCTTTGTTCTGGTCCATaGGCTGTGAGCAGAAATGGCACCTACCACCTCTGCCTCAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: IFWSSLRYAWLCSGP*AVSRNGTYHLCLKV Trigger: TACTTTGAGGCAGAGGTGGTAGGTGCCATTTCTGCTCACAGCTCATGGACCAGAACAAAGCCATGCATACCTGAGAGAGGACCAGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS CCA 90 bp | ATAGGAAGTCAGTGTGAATTGGCTTTAGGCAGTGTGAACTGCCTCTaGAACTTATTCTCCTGCCTCACAAGCATTTATGAAATCTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: IGSQCELALGSVNCL*NLFSCLTSIYEIWP Trigger: GGGCCAGATTTCATAAATGCTTGTGAGGCAGGAGAATAAGTTCCAGAGGCAGTTCACACTGCCTAAAGCCAATTCACACTGACTTCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663069.1 |
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| CDS CCA 90 bp | TTTTGCTGTTTCAGGAATTTCCTGTGTTTCCTTGAGATCTTGTTCTaGAGGTTTCCAGGTGTGGTACCACATTGTGAAGCTCCTAATCAT | + |
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Preference number: 5 (lower is better) Translates to: FCCFRNFLCFLEILF*RFPGVVPHCEAPNH Trigger: ATGATTAGGAGCTTCACAATGTGGTACCACACCTGGAAACCTCCAGAACAAGATCTCAAGGAAACACAGGAAATTCCTGAAACAGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS TCA 90 bp | TGTGAACTGCCTCTGGAACTTATTCTCCTGCCTCACAAGCATTTATaGAATCTGGCCCTAGACAAGATGTCTCAAGATATTAGAGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: CELPLELILLPHKHL*NLALDKMSQDIRVL Trigger: TAACACTCTAATATCTTGAGACATCTTGTCTAGGGCCAGATTTCATAAATGCTTGTGAGGCAGGAGAATAAGTTCCAGAGGCAGTTCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663069.1 |
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| CDS GCA 90 bp | TTAGTTATAGGAAGTCAGTGTGAATTGGCTTTAGGCAGTGTGAACTaGCTCTGGAACTTATTCTCCTGCCTCACAAGCATTTATGAAATC | + |
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Preference number: 5 (lower is better) Translates to: LVIGSQCELALGSVN*LWNLFSCLTSIYEI Trigger: GATTTCATAAATGCTTGTGAGGCAGGAGAATAAGTTCCAGAGGCAGTTCACACTGCCTAAAGCCAATTCACACTGACTTCCTATAACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663069.1 |
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| CDS TCA 90 bp | ATAAGATGTAGAGGTAAACTTGTGACAGCATTGTCTAGTTCATCCTaGAAAACACACCTGGCTCTTCTTTATTCAAAAAGGACATTGCCA | + |
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Preference number: 5 (lower is better) Translates to: IRCRGKLVTALSSSS*KTHLALLYSKRTLP Trigger: TGGCAATGTCCTTTTTGAATAAAGAAGAGCCAGGTGTGTTTTTCAGGATGAACTAGACAATGCTGTCACAAGTTTACCTCTACATCTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS TCA 72 bp | CCCCCTGCTGTGGGATCTTGGAGACACATGCTGAGATaGCTGATTCACAACGCCAACTGCTGCCTGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PPAVGSWRHMLR*LIHNANCCLES Trigger: GCTCTCCAGGCAGCAGTTGGCGTTGTGAATCAGTCATCTCAGCATGTGTCTCCAAGATCCCACAGCAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS CAA 72 bp | TCACAACGCCAACTGCTGCCTGGAGAGCCAACCATCTaGTGCCACGATATGCAGGAAATTTTTCCAAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SQRQLLPGEPTI*CHDMQEIFPRQ Trigger: TTGCCTTGGAAAAATTTCCTGCATATCGTGGCACAAGATGGTTGGCTCTCCAGGCAGCAGTTGGCGTTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS TCA 72 bp | GTCAGACTTGCAGCAGGTTTCAGCTCAGACCCAGACTaGAAAGCTGAGCAGCTGGTGAACAAAAGATTTAGT | + |
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Preference number: 6 (lower is better) Translates to: VRLAAGFSSDPD*KAEQLVNKRFS Trigger: ACTAAATCTTTTGTTCACCAGCTGCTCAGCTTTTCAGTCTGGGTCTGAGCTGAAACCTGCTGCAAGTCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442176.1 |
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| CDS TCA 72 bp | GGGGTTTTGCTGTTTCAGGAATTTCCTGTGTTTCCTTaGGATCTTGTTCTGGAGGTTTCCAGGTGTGGTACC | + |
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Preference number: 6 (lower is better) Translates to: GVLLFQEFPVFP*DLVLEVSRCGT Trigger: GGTACCACACCTGGAAACCTCCAGAACAAGATCTCAAGGAAACACAGGAAATTCCTGAAACAGCAAAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS GCA 72 bp | GGAAGTCAGTGTGAATTGGCTTTAGGCAGTGTGAACTaGCTCTGGAACTTATTCTCCTGCCTCACAAGCATT | + |
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Preference number: 6 (lower is better) Translates to: GSQCELALGSVN*LWNLFSCLTSI Trigger: AATGCTTGTGAGGCAGGAGAATAAGTTCCAGAGGCAGTTCACACTGCCTAAAGCCAATTCACACTGACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663069.1 |
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| CDS CAA 72 bp | GGGGGTTTTGCTGTTTCAGGAATTTCCTGTGTTTCCTaGAGATCTTGTTCTGGAGGTTTCCAGGTGTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: GGFAVSGISCVS*RSCSGGFQVWY Trigger: GTACCACACCTGGAAACCTCCAGAACAAGATCTCAAGGAAACACAGGAAATTCCTGAAACAGCAAAACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS CAA 90 bp | CTTCACATAGGGGGTTTTGCTGTTTCAGGAATTTCCTGTGTTTCCTaGAGATCTTGTTCTGGAGGTTTCCAGGTGTGGTACCACATTGTG | + |
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Preference number: 6 (lower is better) Translates to: LHIGGFAVSGISCVS*RSCSGGFQVWYHIV Trigger: CACAATGTGGTACCACACCTGGAAACCTCCAGAACAAGATCTCAAGGAAACACAGGAAATTCCTGAAACAGCAAAACCCCCTATGTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS CCA 72 bp | TTCAGGAATTTCCTGTGTTTCCTTGAGATCTTGTTCTaGAGGTTTCCAGGTGTGGTACCACATTGTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: FRNFLCFLEILF*RFPGVVPHCEA Trigger: AGCTTCACAATGTGGTACCACACCTGGAAACCTCCAGAACAAGATCTCAAGGAAACACAGGAAATTCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS CCA 72 bp | CAGTGTGAATTGGCTTTAGGCAGTGTGAACTGCCTCTaGAACTTATTCTCCTGCCTCACAAGCATTTATGAA | + |
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Preference number: 6 (lower is better) Translates to: QCELALGSVNCL*NLFSCLTSIYE Trigger: TTCATAAATGCTTGTGAGGCAGGAGAATAAGTTCCAGAGGCAGTTCACACTGCCTAAAGCCAATTCACACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663069.1 |
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| CDS CAA 72 bp | TGCTGTTTCAGGAATTTCCTGTGTTTCCTTGAGATCTaGTTCTGGAGGTTTCCAGGTGTGGTACCACATTGT | + |
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Preference number: 6 (lower is better) Translates to: CCFRNFLCFLEI*FWRFPGVVPHC Trigger: ACAATGTGGTACCACACCTGGAAACCTCCAGAACAAGATCTCAAGGAAACACAGGAAATTCCTGAAACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS TCA 72 bp | CCTCTGGAACTTATTCTCCTGCCTCACAAGCATTTATaGAATCTGGCCCTAGACAAGATGTCTCAAGATATT | + |
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Preference number: 6 (lower is better) Translates to: PLELILLPHKHL*NLALDKMSQDI Trigger: AATATCTTGAGACATCTTGTCTAGGGCCAGATTTCATAAATGCTTGTGAGGCAGGAGAATAAGTTCCAGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663069.1 |
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| CDS CAA 72 bp | TTTGACAGATATATATGTAATTTGGTACCGTCAGACTaGCAGCAGGTTTCAGCTCAGACCCAGACTGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: FDRYICNLVPSD*QQVSAQTQTEK Trigger: CTTTTCAGTCTGGGTCTGAGCTGAAACCTGCTGCAAGTCTGACGGTACCAAATTACATATATATCTGTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000442176.1 |
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| CDS CAA 90 bp | GTCAAAAGGATCAACTTACAGAGAGACTTTAGGTCCTACATCATTTaGACAGATATATATGTAATTTGGTACCGTCAGACTTGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VKRINLQRDFRSYII*TDIYVIWYRQTCSR Trigger: CCTGCTGCAAGTCTGACGGTACCAAATTACATATATATCTGTCAAAATGATGTAGGACCTAAAGTCTCTCTGTAAGTTGATCCTTTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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| CDS TCA 72 bp | AGATTTTCCTTTAGATTTAGTTATAGGAAGTCAGTGTaGATTGGCTTTAGGCAGTGTGAACTGCCTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RFSFRFSYRKSV*IGFRQCELPLE Trigger: TTCCAGAGGCAGTTCACACTGCCTAAAGCCAATTCACACTGACTTCCTATAACTAAATCTAAAGGAAAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663069.1 |
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| CDS CAA 72 bp | TTTCCTTTAGATTTAGTTATAGGAAGTCAGTGTGAATaGGCTTTAGGCAGTGTGAACTGCCTCTGGAACTTA | + |
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Preference number: 6 (lower is better) Translates to: FPLDLVIGSQCE*ALGSVNCLWNL Trigger: TAAGTTCCAGAGGCAGTTCACACTGCCTAAAGCCAATTCACACTGACTTCCTATAACTAAATCTAAAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663069.1 |
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| CDS CAA 72 bp | ATCAACTTACAGAGAGACTTTAGGTCCTACATCATTTaGACAGATATATATGTAATTTGGTACCGTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: INLQRDFRSYII*TDIYVIWYRQT Trigger: AGTCTGACGGTACCAAATTACATATATATCTGTCAAAATGATGTAGGACCTAAAGTCTCTCTGTAAGTTGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442176.1 ENST00000663069.1 |
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