Pregenerated sensors for LINC02586 (Homo sapiens)
Ensembl gene IDs: ENSG00000224965Ensembl transcript IDs: ENST00000455967.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GACAGAGGCGGAGAGCATCAAGACCATGGGTGTCTTGGGCTACGTTaGGCCTCCGAGGCGCAGGATGCGGGGCGGGGTGGTCAGAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: DRGGEHQDHGCLGLR*ASEAQDAGRGGQKA Trigger: GGCCTTCTGACCACCCCGCCCCGCATCCTGCGCCTCGGAGGCCCAACGTAGCCCAAGACACCCATGGTCTTGATGCTCTCCGCCTCTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS CCA 90 bp | CGGGGACTTTGGTGGCTGGGACAGAGGCGGAGAGCATCAAGACCATaGGTGTCTTGGGCTACGTTGGGCCTCCGAGGCGCAGGATGCGGG | + |
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Preference number: 5 (lower is better) Translates to: RGLWWLGQRRRASRP*VSWATLGLRGAGCG Trigger: CCCGCATCCTGCGCCTCGGAGGCCCAACGTAGCCCAAGACACCCATGGTCTTGATGCTCTCCGCCTCTGTCCCAGCCACCAAAGTCCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS TCA 90 bp | CAGCGTCTCTACCCTCTTTCTTCCTTGGCCTTCCGTCAGCCGCAGTaGAACGGCAACAGTGCGACCAGCTTGGCGGGGAGGGGGCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: QRLYPLSSLAFRQPQ*NGNSATSLAGRGRG Trigger: CCCTCGCCCCCTCCCCGCCAAGCTGGTCGCACTGTTGCCGTTTCACTGCGGCTGACGGAAGGCCAAGGAAGAAAGAGGGTAGAGACGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS CCA 90 bp | CTGCCCAAGGCCACCCCGTCCTCCATTCCATCGCGGGGACTTTGGTaGCTGGGACAGAGGCGGAGAGCATCAAGACCATGGGTGTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LPKATPSSIPSRGLW*LGQRRRASRPWVSW Trigger: CCAAGACACCCATGGTCTTGATGCTCTCCGCCTCTGTCCCAGCCACCAAAGTCCCCGCGATGGAATGGAGGACGGGGTGGCCTTGGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS CCA 90 bp | CCAAGGCCACCCCGTCCTCCATTCCATCGCGGGGACTTTGGTGGCTaGGACAGAGGCGGAGAGCATCAAGACCATGGGTGTCTTGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: PRPPRPPFHRGDFGG*DRGGEHQDHGCLGL Trigger: TAGCCCAAGACACCCATGGTCTTGATGCTCTCCGCCTCTGTCCCAGCCACCAAAGTCCCCGCGATGGAATGGAGGACGGGGTGGCCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS CCA 90 bp | TCTCTGCCCAAGGCCACCCCGTCCTCCATTCCATCGCGGGGACTTTaGTGGCTGGGACAGAGGCGGAGAGCATCAAGACCATGGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPKATPSSIPSRGL*WLGQRRRASRPWVS Trigger: AGACACCCATGGTCTTGATGCTCTCCGCCTCTGTCCCAGCCACCAAAGTCCCCGCGATGGAATGGAGGACGGGGTGGCCTTGGGCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS TCA 90 bp | GGTCAGAAGGCCCCAACACGGTCCCTGGGAAAGGAGAGGGCAGCCTaGTCCTCGCGACAGCGTCTCTACCCTCTTTCTTCCTTGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GQKAPTRSLGKERAA*SSRQRLYPLSSLAF Trigger: GAAGGCCAAGGAAGAAAGAGGGTAGAGACGCTGTCGCGAGGATCAGGCTGCCCTCTCCTTTCCCAGGGACCGTGTTGGGGCCTTCTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS GCA 90 bp | TCTTTCTTCCTTGGCCTTCCGTCAGCCGCAGTGAAACGGCAACAGTaGGACCAGCTTGGCGGGGAGGGGGCGAGGGACGAAGCAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SFFLGLPSAAVKRQQ*DQLGGEGARDEARR Trigger: TCTTCTTGCTTCGTCCCTCGCCCCCTCCCCGCCAAGCTGGTCGCACTGTTGCCGTTTCACTGCGGCTGACGGAAGGCCAAGGAAGAAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS GCA 90 bp | GCCAGAGCTACGGTTTCCTTCCATCCGGCACAAGAAGCGCTTCTCTaGCCAAGGCCACCCCGTCCTCCATTCCATCGCGGGGACTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: ARATVSFHPAQEALL*PRPPRPPFHRGDFG Trigger: ACCAAAGTCCCCGCGATGGAATGGAGGACGGGGTGGCCTTGGGCAGAGAAGCGCTTCTTGTGCCGGATGGAAGGAAACCGTAGCTCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS GCA 90 bp | GGTGCACAGGTGTCCAGGGCAGGTGTGTCATTCACCTTTCATTTCTaGCTCAAGATCTCTTTACATCATCCAGACAGGCATGGAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GAQVSRAGVSFTFHF*LKISLHHPDRHGGC Trigger: GCAGCCTCCATGCCTGTCTGGATGATGTAAAGAGATCTTGAGGCAGAAATGAAAGGTGAATGACACACCTGCCCTGGACACCTGTGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS TCA 90 bp | GAGCAGGGACTGGGCACAAAGGGGGTGCCAGTAAATGTGTGTTTCTaGTTAACTCACCTCCCCTGCGTGTCAGTACAGATCATCAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: EQGLGTKGVPVNVCF*LTHLPCVSVQIIKD Trigger: ATCTTTGATGATCTGTACTGACACGCAGGGGAGGTGAGTTAATCAGAAACACACATTTACTGGCACCCCCTTTGTGCCCAGTCCCTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS CAA 90 bp | GGACAGAGGCGGAGAGCATCAAGACCATGGGTGTCTTGGGCTACGTaGGGCCTCCGAGGCGCAGGATGCGGGGCGGGGTGGTCAGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GQRRRASRPWVSWAT*GLRGAGCGAGWSEG Trigger: GCCTTCTGACCACCCCGCCCCGCATCCTGCGCCTCGGAGGCCCAACGTAGCCCAAGACACCCATGGTCTTGATGCTCTCCGCCTCTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS CCA 72 bp | GGAGAGCATCAAGACCATGGGTGTCTTGGGCTACGTTaGGCCTCCGAGGCGCAGGATGCGGGGCGGGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GEHQDHGCLGLR*ASEAQDAGRGG Trigger: ACCACCCCGCCCCGCATCCTGCGCCTCGGAGGCCCAACGTAGCCCAAGACACCCATGGTCTTGATGCTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS CCA 72 bp | GTCAGCCGCAGTGAAACGGCAACAGTGCGACCAGCTTaGCGGGGAGGGGGCGAGGGACGAAGCAAGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: VSRSETATVRPA*RGGGEGRSKKS Trigger: GCTCTTCTTGCTTCGTCCCTCGCCCCCTCCCCGCCAAGCTGGTCGCACTGTTGCCGTTTCACTGCGGCTGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS CCA 72 bp | TGGTGGCTGGGACAGAGGCGGAGAGCATCAAGACCATaGGTGTCTTGGGCTACGTTGGGCCTCCGAGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: WWLGQRRRASRP*VSWATLGLRGA Trigger: TGCGCCTCGGAGGCCCAACGTAGCCCAAGACACCCATGGTCTTGATGCTCTCCGCCTCTGTCCCAGCCACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS CCA 72 bp | GCCACCCCGTCCTCCATTCCATCGCGGGGACTTTGGTaGCTGGGACAGAGGCGGAGAGCATCAAGACCATGG | + |
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Preference number: 6 (lower is better) Translates to: ATPSSIPSRGLW*LGQRRRASRPW Trigger: CCATGGTCTTGATGCTCTCCGCCTCTGTCCCAGCCACCAAAGTCCCCGCGATGGAATGGAGGACGGGGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS TCA 72 bp | TACCCTCTTTCTTCCTTGGCCTTCCGTCAGCCGCAGTaGAACGGCAACAGTGCGACCAGCTTGGCGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: YPLSSLAFRQPQ*NGNSATSLAGR Trigger: CCTCCCCGCCAAGCTGGTCGCACTGTTGCCGTTTCACTGCGGCTGACGGAAGGCCAAGGAAGAAAGAGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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| CDS TCA 72 bp | CTGGGCACAAAGGGGGTGCCAGTAAATGTGTGTTTCTaGTTAACTCACCTCCCCTGCGTGTCAGTACAGATC | + |
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Preference number: 6 (lower is better) Translates to: LGTKGVPVNVCF*LTHLPCVSVQI Trigger: GATCTGTACTGACACGCAGGGGAGGTGAGTTAATCAGAAACACACATTTACTGGCACCCCCTTTGTGCCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455967.1 |
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