Pregenerated sensors for LINC02584 (Homo sapiens)
Ensembl gene IDs: ENSG00000254417Ensembl transcript IDs: ENST00000531347.1, ENST00000533327.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGCTTGGGCCGGTCACCAACACCAGGGGAGGGATGCAACTTTGGTaGACTCACGCCCGGCGTACACCCCGTGGAAGGTACAGGGATGAG | + |
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Preference number: 5 (lower is better) Translates to: GLGPVTNTRGGMQLW*THARRTPRGRYRDE Trigger: CTCATCCCTGTACCTTCCACGGGGTGTACGCCGGGCGTGAGTGCACCAAAGTTGCATCCCTCCCCTGGTGTTGGTGACCGGCCCAAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CCA 90 bp | CTCAACAGTGCAGGGGTGCCAACCTATGTCCCAGCTCCACGGTCTTaGGACCTCAAGTCACCTTCAGCCCCTCAGGCCAGAGGACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LNSAGVPTYVPAPRS*DLKSPSAPQARGQE Trigger: CTCCTGTCCTCTGGCCTGAGGGGCTGAAGGTGACTTGAGGTCCCAAGACCGTGGAGCTGGGACATAGGTTGGCACCCCTGCACTGTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CCA 90 bp | CTCACGCCCGGCGTACACCCCGTGGAAGGTACAGGGATGAGTCTGTaGCTGAGAGCGGCTCTCATGGGGTTCTTGTACTCTCAACAGTGC | + |
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Preference number: 5 (lower is better) Translates to: LTPGVHPVEGTGMSL*LRAALMGFLYSQQC Trigger: GCACTGTTGAGAGTACAAGAACCCCATGAGAGCCGCTCTCAGCCACAGACTCATCCCTGTACCTTCCACGGGGTGTACGCCGGGCGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS GCA 90 bp | CTGTGGCTGAGAGCGGCTCTCATGGGGTTCTTGTACTCTCAACAGTaGAGGGGTGCCAACCTATGTCCCAGCTCCACGGTCTTGGGACCT | + |
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Preference number: 5 (lower is better) Translates to: LWLRAALMGFLYSQQ*RGANLCPSSTVLGP Trigger: AGGTCCCAAGACCGTGGAGCTGGGACATAGGTTGGCACCCCTGCACTGTTGAGAGTACAAGAACCCCATGAGAGCCGCTCTCAGCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS GCA 90 bp | GAGAGCGGCTCTCATGGGGTTCTTGTACTCTCAACAGTGCAGGGGTaGCAACCTATGTCCCAGCTCCACGGTCTTGGGACCTCAAGTCAC | + |
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Preference number: 5 (lower is better) Translates to: ESGSHGVLVLSTVQG*QPMSQLHGLGTSSH Trigger: GTGACTTGAGGTCCCAAGACCGTGGAGCTGGGACATAGGTTGGCACCCCTGCACTGTTGAGAGTACAAGAACCCCATGAGAGCCGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CCA 90 bp | CCTGTCCTTCTCTATCAGAAGCTGTATCATGTCACCGCCAGGCGCTaGGCCTCTTGGTCCTCGCCTACCATCCAAAGGGAGACACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: PVLLYQKLYHVTARR*ASWSSPTIQRETLQ Trigger: CTGAAGTGTCTCCCTTTGGATGGTAGGCGAGGACCAAGAGGCCCAGCGCCTGGCGGTGACATGATACAGCTTCTGATAGAGAAGGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS GCA 90 bp | TGCTGCCTCCTACCAGGAAGCCACCCTCCTGACAGCTTGTTGGTCTaGGCTCCTTGTCACCTGATGCTTGCATCCCCGGTGACTATTAAA | + |
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Preference number: 5 (lower is better) Translates to: CCLLPGSHPPDSLLV*APCHLMLASPVTIK Trigger: TTTAATAGTCACCGGGGATGCAAGCATCAGGTGACAAGGAGCGCAGACCAACAAGCTGTCAGGAGGGTGGCTTCCTGGTAGGAGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CCA 90 bp | CTCTATCAGAAGCTGTATCATGTCACCGCCAGGCGCTGGGCCTCTTaGTCCTCGCCTACCATCCAAAGGGAGACACTTCAGCCTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: LYQKLYHVTARRWAS*SSPTIQRETLQPHF Trigger: AAAGTGAGGCTGAAGTGTCTCCCTTTGGATGGTAGGCGAGGACCAAGAGGCCCAGCGCCTGGCGGTGACATGATACAGCTTCTGATAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CCA 90 bp | TCCATCTCAGGCATTAGACTTCGGTCTTTAGGGAAATCAGGGGCTTaGGCCGGTCACCAACACCAGGGGAGGGATGCAACTTTGGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: SISGIRLRSLGKSGA*AGHQHQGRDATLVH Trigger: GTGCACCAAAGTTGCATCCCTCCCCTGGTGTTGGTGACCGGCCCAAGCCCCTGATTTCCCTAAAGACCGAAGTCTAATGCCTGAGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS GCA 90 bp | TTTGGTTTGTTCAACTTCCCACTGAGTTGCAGACAGCTTGGCCCGTaGTCTGAGGTATTCTTCCCTGTGGGCAATGCCAACGGGATGGAA | + |
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Preference number: 5 (lower is better) Translates to: FGLFNFPLSCRQLGP*SEVFFPVGNANGME Trigger: TTCCATCCCGTTGGCATTGCCCACAGGGAAGAATACCTCAGAGCACGGGCCAAGCTGTCTGCAACTCAGTGGGAAGTTGAACAAACCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS GCA 90 bp | CTTCCTCCCTTTGTAAAGTTTGGTTTGTTCAACTTCCCACTGAGTTaGAGACAGCTTGGCCCGTGCTCTGAGGTATTCTTCCCTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: LPPFVKFGLFNFPLS*RQLGPCSEVFFPVG Trigger: GCCCACAGGGAAGAATACCTCAGAGCACGGGCCAAGCTGTCTGCAACTCAGTGGGAAGTTGAACAAACCAAACTTTACAAAGGGAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS GCA 90 bp | TCAGCCTCACTTTACAAAAGAGGAAATCTAGGCACACCAAGGCCATaGGGTTGGTTAATGGGGAGCGAGGTTCTTGTTCCGGTCCATGGT | + |
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Preference number: 5 (lower is better) Translates to: SASLYKRGNLGTPRP*GWLMGSEVLVPVHG Trigger: ACCATGGACCGGAACAAGAACCTCGCTCCCCATTAACCAACCGCATGGCCTTGGTGTGCCTAGATTTCCTCTTTTGTAAAGTGAGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS TCA 90 bp | TTTGTTCAACTTCCCACTGAGTTGCAGACAGCTTGGCCCGTGCTCTaGGGTATTCTTCCCTGTGGGCAATGCCAACGGGATGGAAATAAA | + |
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Preference number: 5 (lower is better) Translates to: FVQLPTELQTAWPVL*GILPCGQCQRDGNK Trigger: TTTATTTCCATCCCGTTGGCATTGCCCACAGGGAAGAATACCTCAGAGCACGGGCCAAGCTGTCTGCAACTCAGTGGGAAGTTGAACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CCA 90 bp | TCACTTTACAAAAGAGGAAATCTAGGCACACCAAGGCCATGCGGTTaGTTAATGGGGAGCGAGGTTCTTGTTCCGGTCCATGGTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: SLYKRGNLGTPRPCG*LMGSEVLVPVHGLG Trigger: ACCAAGACCATGGACCGGAACAAGAACCTCGCTCCCCATTAACCAACCGCATGGCCTTGGTGTGCCTAGATTTCCTCTTTTGTAAAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS GCA 90 bp | CTTCCTCCCTTTGTAAAGTTTGGTTTGTTCAACTTCCCACTGAGTTaGAGACAGCTTGGCCCGTGCTCTGAGGTATTCTTCCCTGATGCT | + |
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Preference number: 5 (lower is better) Translates to: LPPFVKFGLFNFPLS*RQLGPCSEVFFPDA Trigger: AGCATCAGGGAAGAATACCTCAGAGCACGGGCCAAGCTGTCTGCAACTCAGTGGGAAGTTGAACAAACCAAACTTTACAAAGGGAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533327.1 |
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| CDS GCA 72 bp | AGGGGCTTGGGCCGGTCACCAACACCAGGGGAGGGATaGAACTTTGGTGCACTCACGCCCGGCGTACACCCC | + |
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Preference number: 6 (lower is better) Translates to: RGLGRSPTPGEG*NFGALTPGVHP Trigger: GGGGTGTACGCCGGGCGTGAGTGCACCAAAGTTGCATCCCTCCCCTGGTGTTGGTGACCGGCCCAAGCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CCA 72 bp | GGGCCGGTCACCAACACCAGGGGAGGGATGCAACTTTaGTGCACTCACGCCCGGCGTACACCCCGTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GPVTNTRGGMQL*CTHARRTPRGR Trigger: CCTTCCACGGGGTGTACGCCGGGCGTGAGTGCACCAAAGTTGCATCCCTCCCCTGGTGTTGGTGACCGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CAA 72 bp | TGGGCCGGTCACCAACACCAGGGGAGGGATGCAACTTaGGTGCACTCACGCCCGGCGTACACCCCGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: WAGHQHQGRDAT*VHSRPAYTPWK Trigger: CTTCCACGGGGTGTACGCCGGGCGTGAGTGCACCAAAGTTGCATCCCTCCCCTGGTGTTGGTGACCGGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS GCA 72 bp | CCGGTCACCAACACCAGGGGAGGGATGCAACTTTGGTaGACTCACGCCCGGCGTACACCCCGTGGAAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: PVTNTRGGMQLW*THARRTPRGRY Trigger: GTACCTTCCACGGGGTGTACGCCGGGCGTGAGTGCACCAAAGTTGCATCCCTCCCCTGGTGTTGGTGACCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CCA 72 bp | GCAGGGGTGCCAACCTATGTCCCAGCTCCACGGTCTTaGGACCTCAAGTCACCTTCAGCCCCTCAGGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: AGVPTYVPAPRS*DLKSPSAPQAR Trigger: TCTGGCCTGAGGGGCTGAAGGTGACTTGAGGTCCCAAGACCGTGGAGCTGGGACATAGGTTGGCACCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 72 bp | TGCAGGGGTGCCAACCTATGTCCCAGCTCCACGGTCTaGGGACCTCAAGTCACCTTCAGCCCCTCAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: CRGANLCPSSTV*GPQVTFSPSGQ Trigger: CTGGCCTGAGGGGCTGAAGGTGACTTGAGGTCCCAAGACCGTGGAGCTGGGACATAGGTTGGCACCCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 90 bp | TCTCAACAGTGCAGGGGTGCCAACCTATGTCCCAGCTCCACGGTCTaGGGACCTCAAGTCACCTTCAGCCCCTCAGGCCAGAGGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SQQCRGANLCPSSTV*GPQVTFSPSGQRTG Trigger: TCCTGTCCTCTGGCCTGAGGGGCTGAAGGTGACTTGAGGTCCCAAGACCGTGGAGCTGGGACATAGGTTGGCACCCCTGCACTGTTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS GCA 72 bp | CTACCAGGAAGCCACCCTCCTGACAGCTTGTTGGTCTaGGCTCCTTGTCACCTGATGCTTGCATCCCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LPGSHPPDSLLV*APCHLMLASPV Trigger: CACCGGGGATGCAAGCATCAGGTGACAAGGAGCGCAGACCAACAAGCTGTCAGGAGGGTGGCTTCCTGGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CAA 90 bp | GGTACAGGGATGAGTCTGTGGCTGAGAGCGGCTCTCATGGGGTTCTaGTACTCTCAACAGTGCAGGGGTGCCAACCTATGTCCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GTGMSLWLRAALMGF*YSQQCRGANLCPSS Trigger: GGAGCTGGGACATAGGTTGGCACCCCTGCACTGTTGAGAGTACAAGAACCCCATGAGAGCCGCTCTCAGCCACAGACTCATCCCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 90 bp | GAGGGTGTGATGAGGCCCCAGAGGATTCGCCCCAGAGTCAGAGGCTaGCTGCAGCCAGTGCCTGTAACGTTAGGATCCATCTCAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: EGVMRPQRIRPRVRG*LQPVPVTLGSISGI Trigger: AATGCCTGAGATGGATCCTAACGTTACAGGCACTGGCTGCAGCAAGCCTCTGACTCTGGGGCGAATCCTCTGGGGCCTCATCACACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS GCA 72 bp | AGAGCGGCTCTCATGGGGTTCTTGTACTCTCAACAGTaGAGGGGTGCCAACCTATGTCCCAGCTCCACGGTC | + |
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Preference number: 6 (lower is better) Translates to: RAALMGFLYSQQ*RGANLCPSSTV Trigger: GACCGTGGAGCTGGGACATAGGTTGGCACCCCTGCACTGTTGAGAGTACAAGAACCCCATGAGAGCCGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CCA 72 bp | CTCTATCAGAAGCTGTATCATGTCACCGCCAGGCGCTaGGCCTCTTGGTCCTCGCCTACCATCCAAAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LYQKLYHVTARR*ASWSSPTIQRE Trigger: CTCCCTTTGGATGGTAGGCGAGGACCAAGAGGCCCAGCGCCTGGCGGTGACATGATACAGCTTCTGATAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 72 bp | TGCCTCCTACCAGGAAGCCACCCTCCTGACAGCTTGTaGGTCTGCGCTCCTTGTCACCTGATGCTTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: CLLPGSHPPDSL*VCAPCHLMLAS Trigger: GGATGCAAGCATCAGGTGACAAGGAGCGCAGACCAACAAGCTGTCAGGAGGGTGGCTTCCTGGTAGGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CAA 72 bp | GAAGCTGTATCATGTCACCGCCAGGCGCTGGGCCTCTaGGTCCTCGCCTACCATCCAAAGGGAGACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: EAVSCHRQALGL*VLAYHPKGDTS Trigger: TGAAGTGTCTCCCTTTGGATGGTAGGCGAGGACCAAGAGGCCCAGCGCCTGGCGGTGACATGATACAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 72 bp | ATGAGGCCCCAGAGGATTCGCCCCAGAGTCAGAGGCTaGCTGCAGCCAGTGCCTGTAACGTTAGGATCCATC | + |
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Preference number: 6 (lower is better) Translates to: MRPQRIRPRVRG*LQPVPVTLGSI Trigger: GATGGATCCTAACGTTACAGGCACTGGCTGCAGCAAGCCTCTGACTCTGGGGCGAATCCTCTGGGGCCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS TCA 72 bp | CTTCCCACTGAGTTGCAGACAGCTTGGCCCGTGCTCTaGGGTATTCTTCCCTGTGGGCAATGCCAACGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LPTELQTAWPVL*GILPCGQCQRD Trigger: ATCCCGTTGGCATTGCCCACAGGGAAGAATACCTCAGAGCACGGGCCAAGCTGTCTGCAACTCAGTGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS GCA 72 bp | TCTCATGGGGTTCTTGTACTCTCAACAGTGCAGGGGTaGCAACCTATGTCCCAGCTCCACGGTCTTGGGACC | + |
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Preference number: 6 (lower is better) Translates to: SHGVLVLSTVQG*QPMSQLHGLGT Trigger: GGTCCCAAGACCGTGGAGCTGGGACATAGGTTGGCACCCCTGCACTGTTGAGAGTACAAGAACCCCATGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CCA 72 bp | GGCATTAGACTTCGGTCTTTAGGGAAATCAGGGGCTTaGGCCGGTCACCAACACCAGGGGAGGGATGCAACT | + |
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Preference number: 6 (lower is better) Translates to: GIRLRSLGKSGA*AGHQHQGRDAT Trigger: AGTTGCATCCCTCCCCTGGTGTTGGTGACCGGCCCAAGCCCCTGATTTCCCTAAAGACCGAAGTCTAATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CAA 90 bp | TCTCTATCAGAAGCTGTATCATGTCACCGCCAGGCGCTGGGCCTCTaGGTCCTCGCCTACCATCCAAAGGGAGACACTTCAGCCTCACTT | + |
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Preference number: 6 (lower is better) Translates to: SLSEAVSCHRQALGL*VLAYHPKGDTSASL Trigger: AAGTGAGGCTGAAGTGTCTCCCTTTGGATGGTAGGCGAGGACCAAGAGGCCCAGCGCCTGGCGGTGACATGATACAGCTTCTGATAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS GCA 72 bp | TTCAACTTCCCACTGAGTTGCAGACAGCTTGGCCCGTaGTCTGAGGTATTCTTCCCTGTGGGCAATGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: FNFPLSCRQLGP*SEVFFPVGNAN Trigger: GTTGGCATTGCCCACAGGGAAGAATACCTCAGAGCACGGGCCAAGCTGTCTGCAACTCAGTGGGAAGTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS GCA 72 bp | TTCAACTTCCCACTGAGTTGCAGACAGCTTGGCCCGTaGTCTGAGGTATTCTTCCCTGATGCTTGCATCCCC | + |
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Preference number: 6 (lower is better) Translates to: FNFPLSCRQLGP*SEVFFPDACIP Trigger: GGGGATGCAAGCATCAGGGAAGAATACCTCAGAGCACGGGCCAAGCTGTCTGCAACTCAGTGGGAAGTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533327.1 |
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| CDS CAA 72 bp | ATGAGTCTGTGGCTGAGAGCGGCTCTCATGGGGTTCTaGTACTCTCAACAGTGCAGGGGTGCCAACCTATGT | + |
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Preference number: 6 (lower is better) Translates to: MSLWLRAALMGF*YSQQCRGANLC Trigger: ACATAGGTTGGCACCCCTGCACTGTTGAGAGTACAAGAACCCCATGAGAGCCGCTCTCAGCCACAGACTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 72 bp | CAAAAGAGGAAATCTAGGCACACCAAGGCCATGCGGTaGGTTAATGGGGAGCGAGGTTCTTGTTCCGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: QKRKSRHTKAMR*VNGERGSCSGP Trigger: TGGACCGGAACAAGAACCTCGCTCCCCATTAACCAACCGCATGGCCTTGGTGTGCCTAGATTTCCTCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 90 bp | CTCACTTTACAAAAGAGGAAATCTAGGCACACCAAGGCCATGCGGTaGGTTAATGGGGAGCGAGGTTCTTGTTCCGGTCCATGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LTLQKRKSRHTKAMR*VNGERGSCSGPWSW Trigger: CCAAGACCATGGACCGGAACAAGAACCTCGCTCCCCATTAACCAACCGCATGGCCTTGGTGTGCCTAGATTTCCTCTTTTGTAAAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS TCA 72 bp | TTGCAGGAAAGCGTCAGGATTTCCTATAAAGATAACTaGGCCTCACAGTCGGCCCAGGAGGTGTGGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LQESVRISYKDN*ASQSAQEVWLP Trigger: AGGAAGCCACACCTCCTGGGCCGACTGTGAGGCTCAGTTATCTTTATAGGAAATCCTGACGCTTTCCTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS GCA 72 bp | CTTTACAAAAGAGGAAATCTAGGCACACCAAGGCCATaGGGTTGGTTAATGGGGAGCGAGGTTCTTGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: LYKRGNLGTPRP*GWLMGSEVLVP Trigger: CGGAACAAGAACCTCGCTCCCCATTAACCAACCGCATGGCCTTGGTGTGCCTAGATTTCCTCTTTTGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 72 bp | GGGCACCTCGTTCTTCCTCCCTTTGTAAAGTTTGGTTaGTTCAACTTCCCACTGAGTTGCAGACAGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GHLVLPPFVKFG*FNFPLSCRQLG Trigger: GCCAAGCTGTCTGCAACTCAGTGGGAAGTTGAACAAACCAAACTTTACAAAGGGAGGAAGAACGAGGTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 90 bp | CATAATTTGGGGCACCTCGTTCTTCCTCCCTTTGTAAAGTTTGGTTaGTTCAACTTCCCACTGAGTTGCAGACAGCTTGGCCCGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HNLGHLVLPPFVKFG*FNFPLSCRQLGPCS Trigger: AGAGCACGGGCCAAGCTGTCTGCAACTCAGTGGGAAGTTGAACAAACCAAACTTTACAAAGGGAGGAAGAACGAGGTGCCCCAAATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS CAA 90 bp | GTTCCGGTCCATGGTCTTGGTAACCAGTCCCTGTGTCTCCATAATTaGGGGCACCTCGTTCTTCCTCCCTTTGTAAAGTTTGGTTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: VPVHGLGNQSLCLHN*GHLVLPPFVKFGLF Trigger: GAACAAACCAAACTTTACAAAGGGAGGAAGAACGAGGTGCCCCAAATTATGGAGACACAGGGACTGGTTACCAAGACCATGGACCGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS GCA 72 bp | TTTGTAAAGTTTGGTTTGTTCAACTTCCCACTGAGTTaGAGACAGCTTGGCCCGTGCTCTGAGGTATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FVKFGLFNFPLS*RQLGPCSEVFF Trigger: GAAGAATACCTCAGAGCACGGGCCAAGCTGTCTGCAACTCAGTGGGAAGTTGAACAAACCAAACTTTACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531347.1 ENST00000533327.1 |
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| CDS GCA 72 bp | AATTCTGGAACATCTTTTATTCCAACCACAGGGTTTTaGAGGAAAGCGTCAGGATTTCCTATAAAGATAACT | + |
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Preference number: 6 (lower is better) Translates to: NSGTSFIPTTGF*RKASGFPIKIT Trigger: AGTTATCTTTATAGGAAATCCTGACGCTTTCCTGCAAAACCCTGTGGTTGGAATAAAAGATGTTCCAGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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| CDS CAA 72 bp | AAATTCTGGAACATCTTTTATTCCAACCACAGGGTTTaGCAGGAAAGCGTCAGGATTTCCTATAAAGATAAC | + |
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Preference number: 6 (lower is better) Translates to: KFWNIFYSNHRV*QESVRISYKDN Trigger: GTTATCTTTATAGGAAATCCTGACGCTTTCCTGCAAAACCCTGTGGTTGGAATAAAAGATGTTCCAGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531347.1 |
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