Pregenerated sensors for LINC02579 (Homo sapiens)
Ensembl gene IDs: ENSG00000233694Ensembl transcript IDs: ENST00000417695.2, ENST00000445738.5
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGAGTCCGTGGCTCTGGGGCTTGGCTTCACTCTCCACCTACCCTCTaGGGATGGCTGCAGGTGGGCTTGCTACCATCACAGCCCTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: GVRGSGAWLHSPPTL*GWLQVGLLPSQPLG Trigger: ACCCAAGGGCTGTGATGGTAGCAAGCCCACCTGCAGCCATCCTCAGAGGGTAGGTGGAGAGTGAAGCCAAGCCCCAGAGCCACGGACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 90 bp | GGAAACCCCCAGGCTGGCTCAGTGCCCTTCCATGTTGGAGACTGCTaGGGCCTCGTGGAGGATGACAGCAAATTTGGGTCCTCCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: GNPQAGSVPFHVGDC*GLVEDDSKFGSSRC Trigger: GCACCTGGAGGACCCAAATTTGCTGTCATCCTCCACGAGGCCTCAGCAGTCTCCAACATGGAAGGGCACTGAGCCAGCCTGGGGGTTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 90 bp | GCTCCACCTGCTGTTGTAAAGGTGCCCTCCTCCCATCACAGTTTCTaGGGACCTGGTCCCAGGCAACCCCACTCTGGAGGGCAAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: APPAVVKVPSSHHSF*GPGPRQPHSGGQGK Trigger: CTTCCCTTGCCCTCCAGAGTGGGGTTGCCTGGGACCAGGTCCTCAGAAACTGTGATGGGAGGAGGGCACCTTTACAACAGCAGGTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS CCA 90 bp | CCTCTGTTCCACCTCAGGGCGTGGGGTCCCACCTGGGGGACAGGATaGAATGAAAGGGTCTTTCCAGTGTTCAGTCAGGAAGGTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PLFHLRAWGPTWGTG*NERVFPVFSQEGPW Trigger: CCAGGGACCTTCCTGACTGAACACTGGAAAGACCCTTTCATTCCATCCTGTCCCCCAGGTGGGACCCCACGCCCTGAGGTGGAACAGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | GGTCCAGGCACGGAGTCCATACCTTCATTCTGGAGTCCGTGGCTCTaGGGCTTGGCTTCACTCTCCACCTACCCTCTGAGGATGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: GPGTESIPSFWSPWL*GLASLSTYPLRMAA Trigger: TGCAGCCATCCTCAGAGGGTAGGTGGAGAGTGAAGCCAAGCCCCAGAGCCACGGACTCCAGAATGAAGGTATGGACTCCGTGCCTGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 90 bp | GTTCCACCTCAGGGCGTGGGGTCCCACCTGGGGGACAGGATGGAATaGAAGGGTCTTTCCAGTGTTCAGTCAGGAAGGTCCCTGGAAACC | + |
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Preference number: 5 (lower is better) Translates to: VPPQGVGSHLGDRME*KGLSSVQSGRSLET Trigger: GGTTTCCAGGGACCTTCCTGACTGAACACTGGAAAGACCCTTTCATTCCATCCTGTCCCCCAGGTGGGACCCCACGCCCTGAGGTGGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS GCA 90 bp | AGTGTTCAGTCAGGAAGGTCCCTGGAAACCCCCAGGCTGGCTCAGTaGCCTTCCATGTTGGAGACTGCTGAGGCCTCGTGGAGGATGACA | + |
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Preference number: 5 (lower is better) Translates to: SVQSGRSLETPRLAQ*PSMLETAEASWRMT Trigger: TGTCATCCTCCACGAGGCCTCAGCAGTCTCCAACATGGAAGGGCACTGAGCCAGCCTGGGGGTTTCCAGGGACCTTCCTGACTGAACACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | GTCTTTCCAGTGTTCAGTCAGGAAGGTCCCTGGAAACCCCCAGGCTaGCTCAGTGCCCTTCCATGTTGGAGACTGCTGAGGCCTCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VFPVFSQEGPWKPPG*LSALPCWRLLRPRG Trigger: TCCACGAGGCCTCAGCAGTCTCCAACATGGAAGGGCACTGAGCCAGCCTGGGGGTTTCCAGGGACCTTCCTGACTGAACACTGGAAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | GGGCTTGGCTTCACTCTCCACCTACCCTCTGAGGATGGCTGCAGGTaGGCTTGCTACCATCACAGCCCTTGGGTAGGTAAGGGTCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: GLGFTLHLPSEDGCR*ACYHHSPWVGKGLA Trigger: AGCTAGACCCTTACCTACCCAAGGGCTGTGATGGTAGCAAGCCCACCTGCAGCCATCCTCAGAGGGTAGGTGGAGAGTGAAGCCAAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | GCGGACAGCTTCCCCTCCGGGCTGGCACAGAGAGTCTTGGAGGCATaGAGATGGTCATGGGGATTGAGAGAATTGGTGAGGGTGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ADSFPSGLAQRVLEA*RWSWGLRELVRVVV Trigger: AACCACCACCCTCACCAATTCTCTCAATCCCCATGACCATCTCCATGCCTCCAAGACTCTCTGTGCCAGCCCGGAGGGGAAGCTGTCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS TCA 90 bp | AAGCTCATACAGCCACTTCTGTTCCCGATGTTGTCTGAGGGCCTCTaGCTGTTGCTGAGCCACCTCTGTGTGTCTGGGTGGCAGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KLIQPLLFPMLSEGL*LLLSHLCVSGWQAH Trigger: GTGGGCCTGCCACCCAGACACACAGAGGTGGCTCAGCAACAGTCAGAGGCCCTCAGACAACATCGGGAACAGAAGTGGCTGTATGAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS GCA 90 bp | GGCTTCACTCTCCACCTACCCTCTGAGGATGGCTGCAGGTGGGCTTaGTACCATCACAGCCCTTGGGTAGGTAAGGGTCTAGCTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GFTLHLPSEDGCRWA*YHHSPWVGKGLASQ Trigger: TTGGGAAGCTAGACCCTTACCTACCCAAGGGCTGTGATGGTAGCAAGCCCACCTGCAGCCATCCTCAGAGGGTAGGTGGAGAGTGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | AGGCTGGCTCAGTGCCCTTCCATGTTGGAGACTGCTGAGGCCTCGTaGAGGATGACAGCAAATTTGGGTCCTCCAGGTGCTGTTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RLAQCPSMLETAEAS*RMTANLGPPGAVAP Trigger: AGGAGCAACAGCACCTGGAGGACCCAAATTTGCTGTCATCCTCCACGAGGCCTCAGCAGTCTCCAACATGGAAGGGCACTGAGCCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | CCTTCCTCTTCACCTCTGTTCCACCTCAGGGCGTGGGGTCCCACCTaGGGGACAGGATGGAATGAAAGGGTCTTTCCAGTGTTCAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: PSSSPLFHLRAWGPT*GTGWNERVFPVFSQ Trigger: CTGACTGAACACTGGAAAGACCCTTTCATTCCATCCTGTCCCCCAGGTGGGACCCCACGCCCTGAGGTGGAACAGAGGTGAAGAGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | GTAACAGGTCCAGGCACGGAGTCCATACCTTCATTCTGGAGTCCGTaGCTCTGGGGCTTGGCTTCACTCTCCACCTACCCTCTGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VTGPGTESIPSFWSP*LWGLASLSTYPLRM Trigger: CATCCTCAGAGGGTAGGTGGAGAGTGAAGCCAAGCCCCAGAGCCACGGACTCCAGAATGAAGGTATGGACTCCGTGCCTGGACCTGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 90 bp | CTCAGTGCCCTTCCATGTTGGAGACTGCTGAGGCCTCGTGGAGGATaGCAGCAAATTTGGGTCCTCCAGGTGCTGTTGCTCCTGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LSALPCWRLLRPRGG*QQIWVLQVLLLLKL Trigger: CAACTTCAGGAGCAACAGCACCTGGAGGACCCAAATTTGCTGTCATCCTCCACGAGGCCTCAGCAGTCTCCAACATGGAAGGGCACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 90 bp | TCCCACATTGTTGTAACGCACAGAGGGCGACCAACAGTGGCAAGATaGGTTCAGTGCCTTGGGCGTCTCTGCCCTGACACCACAAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SHIVVTHRGRPTVAR*VQCLGRLCPDTTSG Trigger: TCCACTTGTGGTGTCAGGGCAGAGACGCCCAAGGCACTGAACTCATCTTGCCACTGTTGGTCGCCCTCTGTGCGTTACAACAATGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | GGATGGAATGAAAGGGTCTTTCCAGTGTTCAGTCAGGAAGGTCCCTaGAAACCCCCAGGCTGGCTCAGTGCCCTTCCATGTTGGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: GWNERVFPVFSQEGP*KPPGWLSALPCWRL Trigger: CAGTCTCCAACATGGAAGGGCACTGAGCCAGCCTGGGGGTTTCCAGGGACCTTCCTGACTGAACACTGGAAAGACCCTTTCATTCCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | CCCTCTGAGGATGGCTGCAGGTGGGCTTGCTACCATCACAGCCCTTaGGTAGGTAAGGGTCTAGCTTCCCAAATTAAACGCAGTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: PSEDGCRWACYHHSP*VGKGLASQIKRSQG Trigger: ACCCTGACTGCGTTTAATTTGGGAAGCTAGACCCTTACCTACCCAAGGGCTGTGATGGTAGCAAGCCCACCTGCAGCCATCCTCAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | CCTAATCAAGTAACAGGTCCAGGCACGGAGTCCATACCTTCATTCTaGAGTCCGTGGCTCTGGGGCTTGGCTTCACTCTCCACCTACCCT | + |
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Preference number: 5 (lower is better) Translates to: PNQVTGPGTESIPSF*SPWLWGLASLSTYP Trigger: AGGGTAGGTGGAGAGTGAAGCCAAGCCCCAGAGCCACGGACTCCAGAATGAAGGTATGGACTCCGTGCCTGGACCTGTTACTTGATTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 90 bp | ACCAACAGTGGCAAGATGAGTTCAGTGCCTTGGGCGTCTCTGCCCTaGCACCACAAGTGGACTGTGATAAATGGAATTGGGGTGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: TNSGKMSSVPWASLP*HHKWTVINGIGVGG Trigger: TCCTCCCACCCCAATTCCATTTATCACAGTCCACTTGTGGTGTCAGGGCAGAGACGCCCAAGGCACTGAACTCATCTTGCCACTGTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 90 bp | GGCTTTTTAGAAGCTCATACAGCCACTTCTGTTCCCGATGTTGTCTaGGGGCCTCTGACTGTTGCTGAGCCACCTCTGTGTGTCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: GFLEAHTATSVPDVV*GPLTVAEPPLCVWV Trigger: CACCCAGACACACAGAGGTGGCTCAGCAACAGTCAGAGGCCCTCAGACAACATCGGGAACAGAAGTGGCTGTATGAGCTTCTAAAAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS GCA 90 bp | AACCGGAGGCAGGCGGACAGCCCCAGGAGTCATAATGAGAAGAAATaGTACCTCGGTACAGTGGACGAACGTGCAAACCACACAGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: NRRQADSPRSHNEKK*YLGTVDERANHTES Trigger: ACTTTCTGTGTGGTTTGCACGTTCGTCCACTGTACCGAGGTAGCATTTCTTCTCATTATGACTCCTGGGGCTGTCCGCCTGCCTCCGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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| CDS TCA 90 bp | CCATTTGATAGCTGTGCACACAGAAGCTTAGAGAAGTCAAGGGCCTaGACTAAAGTCACATGGCTACACAGAGCTGGGGCCAGGACTTTG | + |
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Preference number: 5 (lower is better) Translates to: PFDSCAHRSLEKSRA*TKVTWLHRAGARTL Trigger: CAAAGTCCTGGCCCCAGCTCTGTGTAGCCATGTGACTTTAGTTCAGGCCCTTGACTTCTCTAAGCTTCTGTGTGCACAGCTATCAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 90 bp | GTGGCATTTACTGAGTGTTACGTGCCAGGCAATGTGCTAAGCCCTTaGCATTGTACCATCTCAGTAAAGCCTCATAACCACCCACGAGGT | + |
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Preference number: 5 (lower is better) Translates to: VAFTECYVPGNVLSP*HCTISVKPHNHPRG Trigger: ACCTCGTGGGTGGTTATGAGGCTTTACTGAGATGGTACAATGTCAAGGGCTTAGCACATTGCCTGGCACGTAACACTCAGTAAATGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS GCA 90 bp | CGTGCAAACCACACAGAAAGTTTGAAAAAGGTCTACTGGAGGCTCTaGTTTCTGGTAATGGCTCCAAAATACAAAGGGCCTCACACTCCG | + |
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Preference number: 5 (lower is better) Translates to: RANHTESLKKVYWRL*FLVMAPKYKGPHTP Trigger: CGGAGTGTGAGGCCCTTTGTATTTTGGAGCCATTACCAGAAAGCAGAGCCTCCAGTAGACCTTTTTCAAACTTTCTGTGTGGTTTGCACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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| CDS TCA 90 bp | AGGCTGAAGATTAGCACTTTATCTGAAGCAGTTCATCTCCTTTCATaGGAGACTGGAGAAGTTTGGGCCCAAGGAACTGAGTCCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: RLKISTLSEAVHLLS*ETGEVWAQGTESFR Trigger: CCTGAAGGACTCAGTTCCTTGGGCCCAAACTTCTCCAGTCTCTCATGAAAGGAGATGAACTGCTTCAGATAAAGTGCTAATCTTCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 90 bp | GTGGACGAACGTGCAAACCACACAGAAAGTTTGAAAAAGGTCTACTaGAGGCTCTGCTTTCTGGTAATGGCTCCAAAATACAAAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: VDERANHTESLKKVY*RLCFLVMAPKYKGP Trigger: AGGCCCTTTGTATTTTGGAGCCATTACCAGAAAGCAGAGCCTCCAGTAGACCTTTTTCAAACTTTCTGTGTGGTTTGCACGTTCGTCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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| CDS GCA 72 bp | TCAGGAAGGTCCCTGGAAACCCCCAGGCTGGCTCAGTaGCCTTCCATGTTGGAGACTGCTGAGGCCTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: SGRSLETPRLAQ*PSMLETAEASW Trigger: CCACGAGGCCTCAGCAGTCTCCAACATGGAAGGGCACTGAGCCAGCCTGGGGGTTTCCAGGGACCTTCCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CAA 90 bp | GGCACGGAGTCCATACCTTCATTCTGGAGTCCGTGGCTCTGGGGCTaGGCTTCACTCTCCACCTACCCTCTGAGGATGGCTGCAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GTESIPSFWSPWLWG*ASLSTYPLRMAAGG Trigger: CCCACCTGCAGCCATCCTCAGAGGGTAGGTGGAGAGTGAAGCCAAGCCCCAGAGCCACGGACTCCAGAATGAAGGTATGGACTCCGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | GGCTCTGGGGCTTGGCTTCACTCTCCACCTACCCTCTaGGGATGGCTGCAGGTGGGCTTGCTACCATCACAG | + |
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Preference number: 6 (lower is better) Translates to: GSGAWLHSPPTL*GWLQVGLLPSQ Trigger: CTGTGATGGTAGCAAGCCCACCTGCAGCCATCCTCAGAGGGTAGGTGGAGAGTGAAGCCAAGCCCCAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | CAGGGCGTGGGGTCCCACCTGGGGGACAGGATGGAATaGAAGGGTCTTTCCAGTGTTCAGTCAGGAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: QGVGSHLGDRME*KGLSSVQSGRS Trigger: GGACCTTCCTGACTGAACACTGGAAAGACCCTTTCATTCCATCCTGTCCCCCAGGTGGGACCCCACGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | GCTGTTGTAAAGGTGCCCTCCTCCCATCACAGTTTCTaGGGACCTGGTCCCAGGCAACCCCACTCTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: AVVKVPSSHHSF*GPGPRQPHSGG Trigger: CCCTCCAGAGTGGGGTTGCCTGGGACCAGGTCCTCAGAAACTGTGATGGGAGGAGGGCACCTTTACAACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS CCA 72 bp | GTGTTCAGTCAGGAAGGTCCCTGGAAACCCCCAGGCTaGCTCAGTGCCCTTCCATGTTGGAGACTGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: VFSQEGPWKPPG*LSALPCWRLLR Trigger: CCTCAGCAGTCTCCAACATGGAAGGGCACTGAGCCAGCCTGGGGGTTTCCAGGGACCTTCCTGACTGAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 72 bp | TCACCTCTGTTCCACCTCAGGGCGTGGGGTCCCACCTaGGGGACAGGATGGAATGAAAGGGTCTTTCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SPLFHLRAWGPT*GTGWNERVFPV Trigger: CACTGGAAAGACCCTTTCATTCCATCCTGTCCCCCAGGTGGGACCCCACGCCCTGAGGTGGAACAGAGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 72 bp | CCAGGCACGGAGTCCATACCTTCATTCTGGAGTCCGTaGCTCTGGGGCTTGGCTTCACTCTCCACCTACCCT | + |
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Preference number: 6 (lower is better) Translates to: PGTESIPSFWSP*LWGLASLSTYP Trigger: AGGGTAGGTGGAGAGTGAAGCCAAGCCCCAGAGCCACGGACTCCAGAATGAAGGTATGGACTCCGTGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CAA 90 bp | GGAAGGTCCCTGGAAACCCCCAGGCTGGCTCAGTGCCCTTCCATGTaGGAGACTGCTGAGGCCTCGTGGAGGATGACAGCAAATTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GRSLETPRLAQCPSM*ETAEASWRMTANLG Trigger: ACCCAAATTTGCTGTCATCCTCCACGAGGCCTCAGCAGTCTCCAACATGGAAGGGCACTGAGCCAGCCTGGGGGTTTCCAGGGACCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CAA 90 bp | CGGGCCTCAGTTTCTGCATCTCACAGCTTCCACACCCACAGGGTTTaGGGAACCGGAGGCAGGCGGACAGCCCCAGGAGTCATAATGAGA | + |
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Preference number: 6 (lower is better) Translates to: RASVSASHSFHTHRV*GTGGRRTAPGVIMR Trigger: TCTCATTATGACTCCTGGGGCTGTCCGCCTGCCTCCGGTTCCCAAAACCCTGTGGGTGTGGAAGCTGTGAGATGCAGAAACTGAGGCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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| CDS TCA 72 bp | GTTGTAACGCACAGAGGGCGACCAACAGTGGCAAGATaGGTTCAGTGCCTTGGGCGTCTCTGCCCTGACACC | + |
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Preference number: 6 (lower is better) Translates to: VVTHRGRPTVAR*VQCLGRLCPDT Trigger: GGTGTCAGGGCAGAGACGCCCAAGGCACTGAACTCATCTTGCCACTGTTGGTCGCCCTCTGTGCGTTACAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | CAGCCACTTCTGTTCCCGATGTTGTCTGAGGGCCTCTaGCTGTTGCTGAGCCACCTCTGTGTGTCTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: QPLLFPMLSEGL*LLLSHLCVSGW Trigger: CCACCCAGACACACAGAGGTGGCTCAGCAACAGTCAGAGGCCCTCAGACAACATCGGGAACAGAAGTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS GCA 72 bp | CTCCACCTACCCTCTGAGGATGGCTGCAGGTGGGCTTaGTACCATCACAGCCCTTGGGTAGGTAAGGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: LHLPSEDGCRWA*YHHSPWVGKGL Trigger: TAGACCCTTACCTACCCAAGGGCTGTGATGGTAGCAAGCCCACCTGCAGCCATCCTCAGAGGGTAGGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS GCA 72 bp | CTTGGTGTCAGGTGTGTGGTCCCGGGCCTCAGTTTCTaGATCTCACAGCTTCCACACCCACAGGGTTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LGVRCVVPGLSF*ISQLPHPQGFG Trigger: CCCAAAACCCTGTGGGTGTGGAAGCTGTGAGATGCAGAAACTGAGGCCCGGGACCACACACCTGACACCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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| CDS CCA 72 bp | CACCTCAGGGCGTGGGGTCCCACCTGGGGGACAGGATaGAATGAAAGGGTCTTTCCAGTGTTCAGTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HLRAWGPTWGTG*NERVFPVFSQE Trigger: TTCCTGACTGAACACTGGAAAGACCCTTTCATTCCATCCTGTCCCCCAGGTGGGACCCCACGCCCTGAGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 72 bp | ACGGAGTCCATACCTTCATTCTGGAGTCCGTGGCTCTaGGGCTTGGCTTCACTCTCCACCTACCCTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TESIPSFWSPWL*GLASLSTYPLR Trigger: CCTCAGAGGGTAGGTGGAGAGTGAAGCCAAGCCCCAGAGCCACGGACTCCAGAATGAAGGTATGGACTCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 72 bp | GTAACAGGTCCAGGCACGGAGTCCATACCTTCATTCTaGAGTCCGTGGCTCTGGGGCTTGGCTTCACTCTCC | + |
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Preference number: 6 (lower is better) Translates to: VTGPGTESIPSF*SPWLWGLASLS Trigger: GGAGAGTGAAGCCAAGCCCCAGAGCCACGGACTCCAGAATGAAGGTATGGACTCCGTGCCTGGACCTGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 72 bp | CAGTGCCCTTCCATGTTGGAGACTGCTGAGGCCTCGTaGAGGATGACAGCAAATTTGGGTCCTCCAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QCPSMLETAEAS*RMTANLGPPGA Trigger: AGCACCTGGAGGACCCAAATTTGCTGTCATCCTCCACGAGGCCTCAGCAGTCTCCAACATGGAAGGGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 72 bp | TTCACTCTCCACCTACCCTCTGAGGATGGCTGCAGGTaGGCTTGCTACCATCACAGCCCTTGGGTAGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: FTLHLPSEDGCR*ACYHHSPWVGK Trigger: CTTACCTACCCAAGGGCTGTGATGGTAGCAAGCCCACCTGCAGCCATCCTCAGAGGGTAGGTGGAGAGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CCA 72 bp | TTCCCCTCCGGGCTGGCACAGAGAGTCTTGGAGGCATaGAGATGGTCATGGGGATTGAGAGAATTGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FPSGLAQRVLEA*RWSWGLRELVR Trigger: CCTCACCAATTCTCTCAATCCCCATGACCATCTCCATGCCTCCAAGACTCTCTGTGCCAGCCCGGAGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS CAA 72 bp | TCCATACCTTCATTCTGGAGTCCGTGGCTCTGGGGCTaGGCTTCACTCTCCACCTACCCTCTGAGGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SIPSFWSPWLWG*ASLSTYPLRMA Trigger: AGCCATCCTCAGAGGGTAGGTGGAGAGTGAAGCCAAGCCCCAGAGCCACGGACTCCAGAATGAAGGTATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | CTTCCATGTTGGAGACTGCTGAGGCCTCGTGGAGGATaGCAGCAAATTTGGGTCCTCCAGGTGCTGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LPCWRLLRPRGG*QQIWVLQVLLL Trigger: GAGCAACAGCACCTGGAGGACCCAAATTTGCTGTCATCCTCCACGAGGCCTCAGCAGTCTCCAACATGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CAA 90 bp | AGAGCTGGGGCCAGGACTTTGGAACCCAGGCTGCTCTCTACTCAGTaGAAGCTCTCTCAGACCTCTAGATCTTCATCTTCCTCCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RAGARTLEPRLLSTQ*KLSQTSRSSSSSPA Trigger: AGCTGGGGAGGAAGATGAAGATCTAGAGGTCTGAGAGAGCTTCAACTGAGTAGAGAGCAGCCTGGGTTCCAAAGTCCTGGCCCCAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | GAAGCTCATACAGCCACTTCTGTTCCCGATGTTGTCTaGGGGCCTCTGACTGTTGCTGAGCCACCTCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: EAHTATSVPDVV*GPLTVAEPPLC Trigger: ACACAGAGGTGGCTCAGCAACAGTCAGAGGCCCTCAGACAACATCGGGAACAGAAGTGGCTGTATGAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS GCA 72 bp | CAGGCGGACAGCCCCAGGAGTCATAATGAGAAGAAATaGTACCTCGGTACAGTGGACGAACGTGCAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: QADSPRSHNEKK*YLGTVDERANH Trigger: GTGGTTTGCACGTTCGTCCACTGTACCGAGGTAGCATTTCTTCTCATTATGACTCCTGGGGCTGTCCGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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| CDS CCA 72 bp | CAGTTTCTGCATCTTTACCAAGAGCAGGGATGTGGCTaGGCCCAGAATGCAAGACTCTCCGATAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QFLHLYQEQGCG*AQNARLSDSSS Trigger: GGAGCTGCTATCGGAGAGTCTTGCATTCTGGGCCCAGCCACATCCCTGCTCTTGGTAAAGATGCAGAAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS CCA 72 bp | GATGGCTGCAGGTGGGCTTGCTACCATCACAGCCCTTaGGTAGGTAAGGGTCTAGCTTCCCAAATTAAACGC | + |
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Preference number: 6 (lower is better) Translates to: DGCRWACYHHSP*VGKGLASQIKR Trigger: GCGTTTAATTTGGGAAGCTAGACCCTTACCTACCCAAGGGCTGTGATGGTAGCAAGCCCACCTGCAGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CAA 72 bp | GAGACTGCTGAGGCCTCGTGGAGGATGACAGCAAATTaGGGTCCTCCAGGTGCTGTTGCTCCTGAAGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: ETAEASWRMTAN*GPPGAVAPEVE Trigger: TTCAACTTCAGGAGCAACAGCACCTGGAGGACCCAAATTTGCTGTCATCCTCCACGAGGCCTCAGCAGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | AGCTGTGCACACAGAAGCTTAGAGAAGTCAAGGGCCTaGACTAAAGTCACATGGCTACACAGAGCTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SCAHRSLEKSRA*TKVTWLHRAGA Trigger: GGCCCCAGCTCTGTGTAGCCATGTGACTTTAGTTCAGGCCCTTGACTTCTCTAAGCTTCTGTGTGCACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | GGCAAGATGAGTTCAGTGCCTTGGGCGTCTCTGCCCTaGCACCACAAGTGGACTGTGATAAATGGAATTGGG | + |
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Preference number: 6 (lower is better) Translates to: GKMSSVPWASLP*HHKWTVINGIG Trigger: CCCAATTCCATTTATCACAGTCCACTTGTGGTGTCAGGGCAGAGACGCCCAAGGCACTGAACTCATCTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS GCA 72 bp | TGGGGAAGGGAACTTAGGACTTACAGGTGCTCCACCTaGTGTTGTAAAGGTGCCCTCCTCCCATCACAGTTT | + |
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Preference number: 6 (lower is better) Translates to: WGRELRTYRCST*CCKGALLPSQF Trigger: AAACTGTGATGGGAGGAGGGCACCTTTACAACAGCAGGTGGAGCACCTGTAAGTCCTAAGTTCCCTTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS CAA 90 bp | GAGAGGAGAAGGCAAGGCTGGCTCCAGTCTTCTCCAAACTCTTTCTaGGTCTTTGGGGAAGGGAACTTAGGACTTACAGGTGCTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: ERRRQGWLQSSPNSF*VFGEGNLGLTGAPP Trigger: AGGTGGAGCACCTGTAAGTCCTAAGTTCCCTTCCCCAAAGACCAAGAAAGAGTTTGGAGAAGACTGGAGCCAGCCTTGCCTTCTCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000417695.2 |
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| CDS CAA 90 bp | TCCATGTTGGAGACTGCTGAGGCCTCGTGGAGGATGACAGCAAATTaGGGTCCTCCAGGTGCTGTTGCTCCTGAAGTTGAAAGAATATGG | + |
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Preference number: 6 (lower is better) Translates to: SMLETAEASWRMTAN*GPPGAVAPEVERIW Trigger: CCATATTCTTTCAACTTCAGGAGCAACAGCACCTGGAGGACCCAAATTTGCTGTCATCCTCCACGAGGCCTCAGCAGTCTCCAACATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CAA 72 bp | CAGCCCAGCAGCGTGGAGAAGGCCCTTCTGAGGACTTaGAGGCTGAAGATTAGCACTTTATCTGAAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: QPSSVEKALLRT*RLKISTLSEAV Trigger: AACTGCTTCAGATAAAGTGCTAATCTTCAGCCTCAAAGTCCTCAGAAGGGCCTTCTCCACGCTGCTGGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | CCAGGACTTTGGAACCCAGGCTGCTCTCTACTCAGTTaGAGCTCTCTCAGACCTCTAGATCTTCATCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PGLWNPGCSLLS*SSLRPLDLHLP Trigger: AGGAAGATGAAGATCTAGAGGTCTGAGAGAGCTTCAACTGAGTAGAGAGCAGCCTGGGTTCCAAAGTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS TCA 72 bp | GCTTCCCAAATTAAACGCAGTCAGGGTGGCATTTACTaGGTGTTACGTGCCAGGCAATGTGCTAAGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ASQIKRSQGGIY*VLRARQCAKPL Trigger: CAAGGGCTTAGCACATTGCCTGGCACGTAACACTCAGTAAATGCCACCCTGACTGCGTTTAATTTGGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS CAA 90 bp | TGCTACCTCGGTACAGTGGACGAACGTGCAAACCACACAGAAAGTTaGAAAAAGGTCTACTGGAGGCTCTGCTTTCTGGTAATGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CYLGTVDERANHTES*KKVYWRLCFLVMAP Trigger: TGGAGCCATTACCAGAAAGCAGAGCCTCCAGTAGACCTTTTTCAAACTTTCTGTGTGGTTTGCACGTTCGTCCACTGTACCGAGGTAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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| CDS CAA 72 bp | GGTACAGTGGACGAACGTGCAAACCACACAGAAAGTTaGAAAAAGGTCTACTGGAGGCTCTGCTTTCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: GTVDERANHTES*KKVYWRLCFLV Trigger: TACCAGAAAGCAGAGCCTCCAGTAGACCTTTTTCAAACTTTCTGTGTGGTTTGCACGTTCGTCCACTGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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| CDS TCA 72 bp | ATTAGCACTTTATCTGAAGCAGTTCATCTCCTTTCATaGGAGACTGGAGAAGTTTGGGCCCAAGGAACTGAG | + |
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Preference number: 6 (lower is better) Translates to: ISTLSEAVHLLS*ETGEVWAQGTE Trigger: CTCAGTTCCTTGGGCCCAAACTTCTCCAGTCTCTCATGAAAGGAGATGAACTGCTTCAGATAAAGTGCTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000417695.2 ENST00000445738.5 |
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| CDS GCA 72 bp | CACACAGAAAGTTTGAAAAAGGTCTACTGGAGGCTCTaGTTTCTGGTAATGGCTCCAAAATACAAAGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: HTESLKKVYWRL*FLVMAPKYKGP Trigger: AGGCCCTTTGTATTTTGGAGCCATTACCAGAAAGCAGAGCCTCCAGTAGACCTTTTTCAAACTTTCTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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| CDS CCA 72 bp | CGTGCAAACCACACAGAAAGTTTGAAAAAGGTCTACTaGAGGCTCTGCTTTCTGGTAATGGCTCCAAAATAC | + |
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Preference number: 6 (lower is better) Translates to: RANHTESLKKVY*RLCFLVMAPKY Trigger: GTATTTTGGAGCCATTACCAGAAAGCAGAGCCTCCAGTAGACCTTTTTCAAACTTTCTGTGTGGTTTGCACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445738.5 |
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