Pregenerated sensors for LINC02574 (Homo sapiens)
Ensembl gene IDs: ENSG00000233975Ensembl transcript IDs: ENST00000440492.1, ENST00000681370.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGGTCCCAAGGGATCCTGGGGAAGGTGGAGTCTCCCATAAAGAACTaGTCATTTCCAGTGTCATTCAGCCTGAGGACTGCTGAGGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: RSQGILGKVESPIKN*SFPVSFSLRTAEAS Trigger: TGAGGCCTCAGCAGTCCTCAGGCTGAATGACACTGGAAATGACCAGTTCTTTATGGGAGACTCCACCTTCCCCAGGATCCCTTGGGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS CCA 90 bp | GGCAGGAGTCCAGAGGAGGGGATGTCTGAACTGAGTCTGGAAGGATaGAAGGGAGTTTTTCAGGCAGATGAGCTTCTGAAGGCATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GRSPEEGMSELSLEG*KGVFQADELLKASR Trigger: CCTGGATGCCTTCAGAAGCTCATCTGCCTGAAAAACTCCCTTCCATCCTTCCAGACTCAGTTCAGACATCCCCTCCTCTGGACTCCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS TCA 90 bp | CATAAAGAACTGGTCATTTCCAGTGTCATTCAGCCTGAGGACTGCTaGGGCCTCAGATCTAAAATCCTGGGGCAGGGCTGCCCATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: HKELVISSVIQPEDC*GLRSKILGQGCPSL Trigger: GAGAGATGGGCAGCCCTGCCCCAGGATTTTAGATCTGAGGCCTCAGCAGTCCTCAGGCTGAATGACACTGGAAATGACCAGTTCTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS CCA 90 bp | TCTCTCAGTGAGAACAAACTGAGTTCTGCCTCCCCAAGCACCCTGTaGAATCAAGCCTGTCCATTTATACAGGAGGACCTGCTAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLSENKLSSASPSTL*NQACPFIQEDLLGR Trigger: CCTGCCTAGCAGGTCCTCCTGTATAAATGGACAGGCTTGATTCCACAGGGTGCTTGGGGAGGCAGAACTCAGTTTGTTCTCACTGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS TCA 90 bp | CCTAATCAGAGAAGTACCTGGAAGCTTCTCTCAGTGAGAACAAACTaGGTTCTGCCTCCCCAAGCACCCTGTGGAATCAAGCCTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: PNQRSTWKLLSVRTN*VLPPQAPCGIKPVH Trigger: ATGGACAGGCTTGATTCCACAGGGTGCTTGGGGAGGCAGAACTCAGTTTGTTCTCACTGAGAGAAGCTTCCAGGTACTTCTCTGATTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS GCA 90 bp | CCTCAGGGAGCTCATAATCTAGGGCGGAAGCCTGATGGTAACAAATaGTCATGCCATCGTTTTCATTGCAGTCATGATTCATTCTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: PQGAHNLGRKPDGNK*SCHRFHCSHDSFWD Trigger: GTCCCAGAATGAATCATGACTGCAATGAAAACGATGGCATGAGCATTTGTTACCATCAGGCTTCCGCCCTAGATTATGAGCTCCCTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440492.1 ENST00000681370.1 |
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| CDS TCA 90 bp | GGTGCAGGCCAGAGCCAGATTGTTTTGGGCTTCTCACTGCAAACATaGTTGACAGCAGGACAAAGTGTTTTCTGGGTGAAGTTTATTCTG | + |
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Preference number: 5 (lower is better) Translates to: GAGQSQIVLGFSLQT*LTAGQSVFWVKFIL Trigger: CAGAATAAACTTCACCCAGAAAACACTTTGTCCTGCTGTCAATCATGTTTGCAGTGAGAAGCCCAAAACAATCTGGCTCTGGCCTGCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS TCA 90 bp | TCCTATGTGCTTGGGTTGTCTTCTCCTTCCTATTCAGAAGGGCTGTaGATTCCATATGCAAACTGTTCTCCCTATCCCCAGAGTCCTATG | + |
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Preference number: 5 (lower is better) Translates to: SYVLGLSSPSYSEGL*IPYANCSPYPQSPM Trigger: CATAGGACTCTGGGGATAGGGAGAACAGTTTGCATATGGAATTCACAGCCCTTCTGAATAGGAAGGAGAAGACAACCCAAGCACATAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS TCA 90 bp | ATGGTCTGTGAGCCCCAGAGAGTAAACCCTGACTCCAAAGTCAGATaGGCTAATTCCTGGTTGTCACTTGGCTGTTCCCTCTTTGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: MVCEPQRVNPDSKVR*ANSWLSLGCSLFVL Trigger: TAAAACAAAGAGGGAACAGCCAAGTGACAACCAGGAATTAGCTCATCTGACTTTGGAGTCAGGGTTTACTCTCTGGGGCTCACAGACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS CCA 90 bp | AACAAATGCTCATGCCATCGTTTTCATTGCAGTCATGATTCATTCTaGGACGGTGAGATACAGGCTGCTGCAATAACCAGGTGTCTAACT | + |
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Preference number: 5 (lower is better) Translates to: NKCSCHRFHCSHDSF*DGEIQAAAITRCLT Trigger: AGTTAGACACCTGGTTATTGCAGCAGCCTGTATCTCACCGTCCCAGAATGAATCATGACTGCAATGAAAACGATGGCATGAGCATTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440492.1 ENST00000681370.1 |
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| CDS TCA 72 bp | GAGCCCCAGAGAGTAAACCCTGACTCCAAAGTCAGATaGGCTAATTCCTGGTTGTCACTTGGCTGTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: EPQRVNPDSKVR*ANSWLSLGCSL Trigger: GAGGGAACAGCCAAGTGACAACCAGGAATTAGCTCATCTGACTTTGGAGTCAGGGTTTACTCTCTGGGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS GCA 72 bp | CAAAGTAATTGGGTGCCTCCTGAGTGCCAGGCGCTGTaGTGGGTTCTAGCTATAAAGAGAGATGAACCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QSNWVPPECQAL*WVLAIKRDEPS Trigger: AGAGGGTTCATCTCTCTTTATAGCTAGAACCCAGCACAGCGCCTGGCACTCAGGAGGCACCCAATTACTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440492.1 ENST00000681370.1 |
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| CDS GCA 72 bp | TATCCAGTCAGCCAAAGTAATTGGGTGCCTCCTGAGTaGCAGGCGCTGTGCTGGGTTCTAGCTATAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: YPVSQSNWVPPE*QALCWVLAIKR Trigger: TCTCTTTATAGCTAGAACCCAGCACAGCGCCTGGCACTCAGGAGGCACCCAATTACTTTGGCTGACTGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000440492.1 ENST00000681370.1 |
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| CDS CCA 72 bp | CCAGAGGAGGGGATGTCTGAACTGAGTCTGGAAGGATaGAAGGGAGTTTTTCAGGCAGATGAGCTTCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PEEGMSELSLEG*KGVFQADELLK Trigger: CTTCAGAAGCTCATCTGCCTGAAAAACTCCCTTCCATCCTTCCAGACTCAGTTCAGACATCCCCTCCTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS CCA 72 bp | GAGAACAAACTGAGTTCTGCCTCCCCAAGCACCCTGTaGAATCAAGCCTGTCCATTTATACAGGAGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: ENKLSSASPSTL*NQACPFIQEDL Trigger: CAGGTCCTCCTGTATAAATGGACAGGCTTGATTCCACAGGGTGCTTGGGGAGGCAGAACTCAGTTTGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS CAA 90 bp | GAGGGGGCTTCTTCTAAGGGCAGAGACCCTAGTTTGGTGCCAACTTaGGAAGAAAGGAAGAATATGGTCTGTGAGCCCCAGAGAGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: EGASSKGRDPSLVPT*EERKNMVCEPQRVN Trigger: GTTTACTCTCTGGGGCTCACAGACCATATTCTTCCTTTCTTCCAAAGTTGGCACCAAACTAGGGTCTCTGCCCTTAGAAGAAGCCCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS TCA 72 bp | GAGTCTGGAAGGATGGAAGGGAGTTTTTCAGGCAGATaGGCTTCTGAAGGCATCCAGGTAGAGACCAACATG | + |
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Preference number: 6 (lower is better) Translates to: ESGRMEGSFSGR*ASEGIQVETNM Trigger: CATGTTGGTCTCTACCTGGATGCCTTCAGAAGCTCATCTGCCTGAAAAACTCCCTTCCATCCTTCCAGACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS TCA 72 bp | AGAAGTACCTGGAAGCTTCTCTCAGTGAGAACAAACTaGGTTCTGCCTCCCCAAGCACCCTGTGGAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSTWKLLSVRTN*VLPPQAPCGIK Trigger: CTTGATTCCACAGGGTGCTTGGGGAGGCAGAACTCAGTTTGTTCTCACTGAGAGAAGCTTCCAGGTACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS TCA 72 bp | TGCCTAATCAGAGAAGTACCTGGAAGCTTCTCTCAGTaGGAACAAACTGAGTTCTGCCTCCCCAAGCACCCT | + |
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Preference number: 6 (lower is better) Translates to: CLIREVPGSFSQ*EQTEFCLPKHP Trigger: AGGGTGCTTGGGGAGGCAGAACTCAGTTTGTTCTCACTGAGAGAAGCTTCCAGGTACTTCTCTGATTAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS GCA 72 bp | CTTCTTGAGAGAACGGAGACCTGGCTTCTCCATCTCTaGCTAATCAGAGAAGTACCTGGAAGCTTCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLERTETWLLHL*LIREVPGSFSQ Trigger: CTGAGAGAAGCTTCCAGGTACTTCTCTGATTAGGCAGAGATGGAGAAGCCAGGTCTCCGTTCTCTCAAGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS TCA 72 bp | AAGGATGGAAGGGAGTTTTTCAGGCAGATGAGCTTCTaGAGGCATCCAGGTAGAGACCAACATGTGCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: KDGREFFRQMSF*RHPGRDQHVLR Trigger: CCTTAGCACATGTTGGTCTCTACCTGGATGCCTTCAGAAGCTCATCTGCCTGAAAAACTCCCTTCCATCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS CAA 72 bp | TCTTCTAAGGGCAGAGACCCTAGTTTGGTGCCAACTTaGGAAGAAAGGAAGAATATGGTCTGTGAGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSKGRDPSLVPT*EERKNMVCEPQ Trigger: CTGGGGCTCACAGACCATATTCTTCCTTTCTTCCAAAGTTGGCACCAAACTAGGGTCTCTGCCCTTAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS TCA 72 bp | CTTGGGTTGTCTTCTCCTTCCTATTCAGAAGGGCTGTaGATTCCATATGCAAACTGTTCTCCCTATCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LGLSSPSYSEGL*IPYANCSPYPQ Trigger: CTGGGGATAGGGAGAACAGTTTGCATATGGAATTCACAGCCCTTCTGAATAGGAAGGAGAAGACAACCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS CCA 72 bp | TCATGCCATCGTTTTCATTGCAGTCATGATTCATTCTaGGACGGTGAGATACAGGCTGCTGCAATAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SCHRFHCSHDSF*DGEIQAAAITR Trigger: CCTGGTTATTGCAGCAGCCTGTATCTCACCGTCCCAGAATGAATCATGACTGCAATGAAAACGATGGCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440492.1 ENST00000681370.1 |
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| CDS GCA 72 bp | CCTGATGGTAACAAATGCTCATGCCATCGTTTTCATTaGAGTCATGATTCATTCTGGGACGGTGAGATACAG | + |
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Preference number: 6 (lower is better) Translates to: PDGNKCSCHRFH*SHDSFWDGEIQ Trigger: CTGTATCTCACCGTCCCAGAATGAATCATGACTGCAATGAAAACGATGGCATGAGCATTTGTTACCATCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440492.1 ENST00000681370.1 |
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| CDS GCA 72 bp | GCTCATAATCTAGGGCGGAAGCCTGATGGTAACAAATaGTCATGCCATCGTTTTCATTGCAGTCATGATTCA | + |
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Preference number: 6 (lower is better) Translates to: AHNLGRKPDGNK*SCHRFHCSHDS Trigger: TGAATCATGACTGCAATGAAAACGATGGCATGAGCATTTGTTACCATCAGGCTTCCGCCCTAGATTATGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000440492.1 ENST00000681370.1 |
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| CDS CAA 72 bp | GAGCTAATTCCTGGTTGTCACTTGGCTGTTCCCTCTTaGTTTTATGCAAGTCCTTCATCAATCATAACTGAC | + |
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Preference number: 6 (lower is better) Translates to: ELIPGCHLAVPS*FYASPSSIITD Trigger: GTCAGTTATGATTGATGAAGGACTTGCATAAAACAAAGAGGGAACAGCCAAGTGACAACCAGGAATTAGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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| CDS CAA 90 bp | AAGTCAGATGAGCTAATTCCTGGTTGTCACTTGGCTGTTCCCTCTTaGTTTTATGCAAGTCCTTCATCAATCATAACTGACATTTACGGA | + |
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Preference number: 6 (lower is better) Translates to: KSDELIPGCHLAVPS*FYASPSSIITDIYG Trigger: TCCGTAAATGTCAGTTATGATTGATGAAGGACTTGCATAAAACAAAGAGGGAACAGCCAAGTGACAACCAGGAATTAGCTCATCTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681370.1 |
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