Pregenerated sensors for LINC02572 (Homo sapiens)
Ensembl gene IDs: ENSG00000229536Ensembl transcript IDs: ENST00000450531.1, ENST00000641154.1, ENST00000654914.1, ENST00000666679.1, ENST00000669319.1
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAACTACACGGGGGTGGTGGGTCCATGAGGAGCAGACCCCCTACGTaGCCACAGGAGCAGCAGCAGGACAGAGGACCCTCCAGGGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: QLHGGGGSMRSRPPT*PQEQQQDRGPSRVA Trigger: GGCGACCCTGGAGGGTCCTCTGTCCTGCTGCTGCTCCTGTGGTCACGTAGGGGGTCTGCTCCTCATGGACCCACCACCCCCGTGTAGTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 90 bp | CAGCTCGCAGGCTGTGTTAGGAGCACCTTCAGGGCCGACCTCAGCTaGCCACCGCCACTCGCCCCCGCAGTCGGTCATCCCAAGCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: QLAGCVRSTFRADLS*PPPLAPAVGHPKLF Trigger: GAAAAGCTTGGGATGACCGACTGCGGGGGCGAGTGGCGGTGGCCAGCTGAGGTCGGCCCTGAAGGTGCTCCTAACACAGCCTGCGAGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS TCA 90 bp | CTGGCCGGGTCTTCTCCGCGAATTGGGATCTGCCTCCTGGGAGGATaGTACCCGTGGCTGCTGCTCTGCGTGGCTCACCTTGGCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LAGSSPRIGICLLGG*YPWLLLCVAHLGQE Trigger: CTCCTGGCCAAGGTGAGCCACGCAGAGCAGCAGCCACGGGTATCATCCTCCCAGGAGGCAGATCCCAATTCGCGGAGAAGACCCGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 90 bp | TCCTCCCGCTGGCCGGGTCTTCTCCGCGAATTGGGATCTGCCTCCTaGGAGGATGATACCCGTGGCTGCTGCTCTGCGTGGCTCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: SSRWPGLLRELGSAS*EDDTRGCCSAWLTL Trigger: CAAGGTGAGCCACGCAGAGCAGCAGCCACGGGTATCATCCTCCCAGGAGGCAGATCCCAATTCGCGGAGAAGACCCGGCCAGCGGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 90 bp | GGACCCTCCAGGGTCGCCAACAGGGACATCTTGGCCCAGACATCATaGACAGGGTCCCCCTTGGCTCACCCGACCAGGCAGGTAAGACTG | + |
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Preference number: 5 (lower is better) Translates to: GPSRVANRDILAQTS*TGSPLAHPTRQVRL Trigger: CAGTCTTACCTGCCTGGTCGGGTGAGCCAAGGGGGACCCTGTCCATGATGTCTGGGCCAAGATGTCCCTGTTGGCGACCCTGGAGGGTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 90 bp | AGCAGCAGGACAGAGGACCCTCCAGGGTCGCCAACAGGGACATCTTaGCCCAGACATCATGGACAGGGTCCCCCTTGGCTCACCCGACCA | + |
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Preference number: 5 (lower is better) Translates to: SSRTEDPPGSPTGTS*PRHHGQGPPWLTRP Trigger: TGGTCGGGTGAGCCAAGGGGGACCCTGTCCATGATGTCTGGGCCAAGATGTCCCTGTTGGCGACCCTGGAGGGTCCTCTGTCCTGCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 90 bp | AGAGTCCCAATCCCAGCCTTGAGGATGAGGCTGGCATCCTCCCGCTaGCCGGGTCTTCTCCGCGAATTGGGATCTGCCTCCTGGGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: RVPIPALRMRLASSR*PGLLRELGSASWED Trigger: ATCCTCCCAGGAGGCAGATCCCAATTCGCGGAGAAGACCCGGCCAGCGGGAGGATGCCAGCCTCATCCTCAAGGCTGGGATTGGGACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
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| CDS TCA 90 bp | AGCCACATGTCAATGCCAAGGGTATCCAGGACCGGACCGAGCTCCTaGTCTGCGCCACGGTCACACAGGGTCTCCACACACCAGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: SHMSMPRVSRTGPSS*SAPRSHRVSTHQAG Trigger: TCCTGCCTGGTGTGTGGAGACCCTGTGTGACCGTGGCGCAGATCAGGAGCTCGGTCCGGTCCTGGATACCCTTGGCATTGACATGTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS CCA 90 bp | TGGACAGGGTCCCCCTTGGCTCACCCGACCAGGCAGGTAAGACTGTaGGGCCAGCAAAGCTCGTCACCTCACTCAGGGACAAAGACATCC | + |
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Preference number: 5 (lower is better) Translates to: WTGSPLAHPTRQVRL*GQQSSSPHSGTKTS Trigger: GGATGTCTTTGTCCCTGAGTGAGGTGACGAGCTTTGCTGGCCCCACAGTCTTACCTGCCTGGTCGGGTGAGCCAAGGGGGACCCTGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS GCA 90 bp | TGGCTGCTGCTCTGCGTGGCTCACCTTGGCCAGGAGCTAGATTCCTaGTGGTGGGAAATGCATAGCCTACTTGCTGCACCCAAGCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: WLLLCVAHLGQELDS*WWEMHSLLAAPKRL Trigger: CAGGCGCTTGGGTGCAGCAAGTAGGCTATGCATTTCCCACCAGCAGGAATCTAGCTCCTGGCCAAGGTGAGCCACGCAGAGCAGCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
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| CDS GCA 90 bp | CACAGTATGGAACACACTTCCCGGCAGCCTTTGCAGCCCTGTGACTaGTCCAGGGCTACGCTCCAGCCATGTGACTACGCTCCAGTCGTG | + |
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Preference number: 5 (lower is better) Translates to: HSMEHTSRQPLQPCD*SRATLQPCDYAPVV Trigger: CACGACTGGAGCGTAGTCACATGGCTGGAGCGTAGCCCTGGAGCAGTCACAGGGCTGCAAAGGCTGCCGGGAAGTGTGTTCCATACTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS CCA 90 bp | CTGCTGCTCTGCGTGGCTCACCTTGGCCAGGAGCTAGATTCCTGCTaGTGGGAAATGCATAGCCTACTTGCTGCACCCAAGCGCCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LLLCVAHLGQELDSC*WEMHSLLAAPKRLE Trigger: CTCCAGGCGCTTGGGTGCAGCAAGTAGGCTATGCATTTCCCACCAGCAGGAATCTAGCTCCTGGCCAAGGTGAGCCACGCAGAGCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
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| CDS GCA 90 bp | TGGGGCCAGCAAAGCTCGTCACCTCACTCAGGGACAAAGACATCCTaGCCAAGCATGGGAGTTGGAGGTGAGGATGAGTGCCAGGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: WGQQSSSPHSGTKTS*PSMGVGGEDECQVP Trigger: AGGCACCTGGCACTCATCCTCACCTCCAACTCCCATGCTTGGGCAGGATGTCTTTGTCCCTGAGTGAGGTGACGAGCTTTGCTGGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 90 bp | GGCAAACTCCCACCAAACCCCTTCCCTTGCTCTGGGCACACAGTATaGAACACACTTCCCGGCAGCCTTTGCAGCCCTGTGACTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GKLPPNPFPCSGHTV*NTLPGSLCSPVTAP Trigger: TGGAGCAGTCACAGGGCTGCAAAGGCTGCCGGGAAGTGTGTTCCATACTGTGTGCCCAGAGCAAGGGAAGGGGTTTGGTGGGAGTTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS GCA 90 bp | ACTGGGGGACAGCCAGCCACACAACATGTCAGATGGGGTCACTGCTaGAGGACATGCGGGAAATTCAGGAGGAGTCCAGGTGACTACCAG | + |
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Preference number: 5 (lower is better) Translates to: TGGQPATQHVRWGHC*RTCGKFRRSPGDYQ Trigger: CTGGTAGTCACCTGGACTCCTCCTGAATTTCCCGCATGTCCTGCAGCAGTGACCCCATCTGACATGTTGTGTGGCTGGCTGTCCCCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000641154.1 ENST00000666679.1 |
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| CDS GCA 90 bp | AGGGTCATGAGCAACGTGTCCACTAGCATCCTTCATTCCTGGGCCTaGCATGCTGGTGGAAAGGGCTCCAGATTGCCGTTTGGGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: RVMSNVSTSILHSWA*HAGGKGSRLPFGKP Trigger: GGGCTTCCCAAACGGCAATCTGGAGCCCTTTCCACCAGCATGGCAGGCCCAGGAATGAAGGATGCTAGTGGACACGTTGCTCATGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS CCA 90 bp | GCAGTCAGGGTCATGAGCAACGTGTCCACTAGCATCCTTCATTCCTaGGCCTGCCATGCTGGTGGAAAGGGCTCCAGATTGCCGTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: AVRVMSNVSTSILHS*ACHAGGKGSRLPFG Trigger: CCCAAACGGCAATCTGGAGCCCTTTCCACCAGCATGGCAGGCCCAGGAATGAAGGATGCTAGTGGACACGTTGCTCATGACCCTGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS GCA 90 bp | TCCTTCATTCCTGGGCCTGCCATGCTGGTGGAAAGGGCTCCAGATTaGCGTTTGGGAAGCCCCACTCTGGTCCATGAAAAGGCCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: SFIPGPAMLVERAPD*RLGSPTLVHEKAHV Trigger: TACATGGGCCTTTTCATGGACCAGAGTGGGGCTTCCCAAACGGCAATCTGGAGCCCTTTCCACCAGCATGGCAGGCCCAGGAATGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS GCA 90 bp | GTCTTCTACTCTCTCTCTCTTCCACTGTCTGCAGCCACATGTCAATaGCAAGGGTATCCAGGACCGGACCGAGCTCCTGATCTGCGCCAC | + |
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Preference number: 5 (lower is better) Translates to: VFYSLSLPLSAATCQ*QGYPGPDRAPDLRH Trigger: GTGGCGCAGATCAGGAGCTCGGTCCGGTCCTGGATACCCTTGGCATTGACATGTGGCTGCAGACAGTGGAAGAGAGAGAGAGTAGAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS CCA 90 bp | AAAGCTCGTCACCTCACTCAGGGACAAAGACATCCTGCCCAAGCATaGGAGTTGGAGGTGAGGATGAGTGCCAGGTGCCTTCTTTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: KARHLTQGQRHPAQA*ELEVRMSARCLLCP Trigger: GGGGCAAAGAAGGCACCTGGCACTCATCCTCACCTCCAACTCCCATGCTTGGGCAGGATGTCTTTGTCCCTGAGTGAGGTGACGAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 90 bp | GGCTATGATTTCACTGGGGGACAGCCAGCCACACAACATGTCAGATaGGGTCACTGCTGCAGGACATGCGGGAAATTCAGGAGGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GYDFTGGQPATQHVR*GHCCRTCGKFRRSP Trigger: TGGACTCCTCCTGAATTTCCCGCATGTCCTGCAGCAGTGACCCCATCTGACATGTTGTGTGGCTGGCTGTCCCCCAGTGAAATCATAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000641154.1 ENST00000666679.1 |
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| CDS TCA 90 bp | CAAATCCTTTCCCCCTTTTCGGGAATAGCAAGCGAGTCCAAGAGATaGGGTCACGTGATGCCGTCCGACCAATCTGGTGTGAGCAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: QILSPFSGIASESKR*GHVMPSDQSGVSRG Trigger: GCCTCTGCTCACACCAGATTGGTCGGACGGCATCACGTGACCTCATCTCTTGGACTCGCTTGCTATTCCCGAAAAGGGGGAAAGGATTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654914.1 |
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| CDS TCA 90 bp | ACAGCATCTAAAAGGAAACCATCGCTGCCTTCTGCTCAGCAAAGATaGCCCCATCCTCCCTCCAGAAGGAGAGCGGTTTCTGGAGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: TASKRKPSLPSAQQR*PHPPSRRRAVSGEA Trigger: GGCCTCTCCAGAAACCGCTCTCCTTCTGGAGGGAGGATGGGGTCATCTTTGCTGAGCAGAAGGCAGCGATGGTTTCCTTTTAGATGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS TCA 90 bp | CTACGCTCCAGTCGTGGACTGGGAATGAAGTTGACGCATGCTGAGTaGGCTCAGGCAGGTCTTCTACTCTCTCTCTCTTCCACTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LRSSRGLGMKLTHAE*AQAGLLLSLSSTVC Trigger: GCAGACAGTGGAAGAGAGAGAGAGTAGAAGACCTGCCTGAGCTCACTCAGCATGCGTCAACTTCATTCCCAGTCCACGACTGGAGCGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS GCA 90 bp | GTGTTTTGTCAGTGTCCTGAGCCAGACACAGTGGCCACAGGTCCCTaGCAAGGGAGAAATCACGAGGTGCGACGAACACCTTGCAAATGT | + |
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Preference number: 5 (lower is better) Translates to: VFCQCPEPDTVATGP*QGRNHEVRRTPCKC Trigger: ACATTTGCAAGGTGTTCGTCGCACCTCGTGATTTCTCCCTTGGCAGGGACCTGTGGCCACTGTGTCTGGCTCAGGACACTGACAAAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS TCA 90 bp | GGCACAGCTAGGCAGTTCTCTGGCTCCCAGTGGTATCATCTGAGGTaGCTGAGCAGTAATCAGTTGATGGACGAACTGGAGGTTAGATGG | + |
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Preference number: 5 (lower is better) Translates to: GTARQFSGSQWYHLR*LSSNQLMDELEVRW Trigger: CCATCTAACCTCCAGTTCGTCCATCAACTGATTACTGCTCAGTCACCTCAGATGATACCACTGGGAGCCAGAGAACTGCCTAGCTGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000641154.1 ENST00000654914.1 ENST00000666679.1 ENST00000669319.1 |
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| CDS GCA 90 bp | ACAAAGACATCCTGCCCAAGCATGGGAGTTGGAGGTGAGGATGAGTaGCAGGTGCCTTCTTTGCCCCCTGTACCCCTAACAAATAACTTT | + |
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Preference number: 5 (lower is better) Translates to: TKTSCPSMGVGGEDE*QVPSLPPVPLTNNF Trigger: AAAGTTATTTGTTAGGGGTACAGGGGGCAAAGAAGGCACCTGGCACTCATCCTCACCTCCAACTCCCATGCTTGGGCAGGATGTCTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 90 bp | TTCATGCATTTGATTTCAATTGTCACAGCAGCGCTGTGGTGGAACTaGCAAACTCCCACCAAACCCCTTCCCTTGCTCTGGGCACACAGT | + |
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Preference number: 5 (lower is better) Translates to: FMHLISIVTAALWWN*QTPTKPLPLLWAHS Trigger: ACTGTGTGCCCAGAGCAAGGGAAGGGGTTTGGTGGGAGTTTGCCAGTTCCACCACAGCGCTGCTGTGACAATTGAAATCAAATGCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS CCA 90 bp | AGATGGGCTCAGGGCTCCCAGAAAGAATATCCTACGATACCTCTATaGAGACTTAGCATCTACAAGACCCAGTTTGACAACTGCCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: RWAQGSQKEYPTIPL*RLSIYKTQFDNCQR Trigger: GCGCTGGCAGTTGTCAAACTGGGTCTTGTAGATGCTAAGTCTCCATAGAGGTATCGTAGGATATTCTTTCTGGGAGCCCTGAGCCCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000641154.1 ENST00000669319.1 |
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| CDS CCA 90 bp | AGGCCACAGGGCTGCCATCCATCAGTGTTACTTCAAGTAATTCTTTaGACACATGAGGAGGAAATGACCTCCAACACCAGCATGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RPQGCHPSVLLQVIL*THEEEMTSNTSMRQ Trigger: CTGCCTCATGCTGGTGTTGGAGGTCATTTCCTCCTCATGTGTCCAAAGAATTACTTGAAGTAACACTGATGGATGGCAGCCCTGTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS GCA 90 bp | AAAGATACTGCCTCACAGGTATCGGAGGAACCCAGGCCACAGGGCTaGCATCCATCAGTGTTACTTCAAGTAATTCTTTGGACACATGAG | + |
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Preference number: 5 (lower is better) Translates to: KDTASQVSEEPRPQG*HPSVLLQVILWTHE Trigger: CTCATGTGTCCAAAGAATTACTTGAAGTAACACTGATGGATGGCAGCCCTGTGGCCTGGGTTCCTCCGATACCTGTGAGGCAGTATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS GCA 90 bp | ATACCTCTATGGAGACTTAGCATCTACAAGACCCAGTTTGACAACTaGCAGCGCCAGGGAATAAGTGAAGTTTCTCAGCCCAAGTCACAC | + |
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Preference number: 5 (lower is better) Translates to: IPLWRLSIYKTQFDN*QRQGISEVSQPKSH Trigger: GTGTGACTTGGGCTGAGAAACTTCACTTATTCCCTGGCGCTGGCAGTTGTCAAACTGGGTCTTGTAGATGCTAAGTCTCCATAGAGGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450531.1 ENST00000669319.1 |
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| CDS CCA 90 bp | TGCAGCAGTTTCTTCAGGAAAAAGGTCATCCCTACGATACCTCTATaGAGACTTAGCATCTACAAGACCCAGTTTGACAACTGCCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: CSSFFRKKVIPTIPL*RLSIYKTQFDNCQR Trigger: GCGCTGGCAGTTGTCAAACTGGGTCTTGTAGATGCTAAGTCTCCATAGAGGTATCGTAGGGATGACCTTTTTCCTGAAGAAACTGCTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450531.1 |
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| CDS TCA 90 bp | GCTGGCACTTCAGACCAGTGGGTGAAGCATAGATTGTCCTGTAAATaGTGGTATTGGGAAAACTGGCTAACCGCTGGAATGAATAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: AGTSDQWVKHRLSCK*WYWENWLTAGMNKD Trigger: GTCTTTATTCATTCCAGCGGTTAGCCAGTTTTCCCAATACCATCATTTACAGGACAATCTATGCTTCACCCACTGGTCTGAAGTGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS TCA 90 bp | GAGATATTGGCTCCAATGTGTGTTCCCAGGGACATCAGAGCAGAATaGGATCACTCAGAAGGAAACTTCTCTCTCATATCTGTAAATGGT | + |
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Preference number: 5 (lower is better) Translates to: EILAPMCVPRDIRAE*DHSEGNFSLISVNG Trigger: ACCATTTACAGATATGAGAGAGAAGTTTCCTTCTGAGTGATCTCATTCTGCTCTGATGTCCCTGGGAACACACATTGGAGCCAATATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS TCA 90 bp | TCCATCATTCTTTTATCTGGCTCCCTACAGGGAGCTAATTTAATTTaGAAAGATGGGAGATATTGGCTCCAATGTGTGTTCCCAGGGACA | + |
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Preference number: 5 (lower is better) Translates to: SIILLSGSLQGANLI*KDGRYWLQCVFPGT Trigger: TGTCCCTGGGAACACACATTGGAGCCAATATCTCCCATCTTTTCAAATTAAATTAGCTCCCTGTAGGGAGCCAGATAAAAGAATGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS TCA 90 bp | ATGAGATCACTCAGAAGGAAACTTCTCTCTCATATCTGTAAATGGTaGGGTCTACAAAGTCTTCTTCTTGAGGAAGCTCTTATAAACCAC | + |
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Preference number: 5 (lower is better) Translates to: MRSLRRKLLSHICKW*GLQSLLLEEALINH Trigger: GTGGTTTATAAGAGCTTCCTCAAGAAGAAGACTTTGTAGACCTCACCATTTACAGATATGAGAGAGAAGTTTCCTTCTGAGTGATCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS CCA 72 bp | GGCTGTGTTAGGAGCACCTTCAGGGCCGACCTCAGCTaGCCACCGCCACTCGCCCCCGCAGTCGGTCATCCC | + |
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Preference number: 6 (lower is better) Translates to: GCVRSTFRADLS*PPPLAPAVGHP Trigger: GGGATGACCGACTGCGGGGGCGAGTGGCGGTGGCCAGCTGAGGTCGGCCCTGAAGGTGCTCCTAACACAGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS TCA 72 bp | GGGGGTGGTGGGTCCATGAGGAGCAGACCCCCTACGTaGCCACAGGAGCAGCAGCAGGACAGAGGACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GGGGSMRSRPPT*PQEQQQDRGPS Trigger: GGAGGGTCCTCTGTCCTGCTGCTGCTCCTGTGGTCACGTAGGGGGTCTGCTCCTCATGGACCCACCACCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS GCA 72 bp | GCCAAGGGTATCCAGGACCGGACCGAGCTCCTGATCTaGGCCACGGTCACACAGGGTCTCCACACACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: AKGIQDRTELLI*ATVTQGLHTPG Trigger: GCCTGGTGTGTGGAGACCCTGTGTGACCGTGGCGCAGATCAGGAGCTCGGTCCGGTCCTGGATACCCTTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS CAA 72 bp | CTGGCATCCTCCCGCTGGCCGGGTCTTCTCCGCGAATaGGGATCTGCCTCCTGGGAGGATGATACCCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LASSRWPGLLRE*GSASWEDDTRG Trigger: GCCACGGGTATCATCCTCCCAGGAGGCAGATCCCAATTCGCGGAGAAGACCCGGCCAGCGGGAGGATGCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
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| CDS CAA 90 bp | CAGCAGCAGGACAGAGGACCCTCCAGGGTCGCCAACAGGGACATCTaGGCCCAGACATCATGGACAGGGTCCCCCTTGGCTCACCCGACC | + |
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Preference number: 6 (lower is better) Translates to: QQQDRGPSRVANRDI*AQTSWTGSPLAHPT Trigger: GGTCGGGTGAGCCAAGGGGGACCCTGTCCATGATGTCTGGGCCAAGATGTCCCTGTTGGCGACCCTGGAGGGTCCTCTGTCCTGCTGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 72 bp | TGGCATCCTCCCGCTGGCCGGGTCTTCTCCGCGAATTaGGATCTGCCTCCTGGGAGGATGATACCCGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: WHPPAGRVFSAN*DLPPGRMIPVA Trigger: AGCCACGGGTATCATCCTCCCAGGAGGCAGATCCCAATTCGCGGAGAAGACCCGGCCAGCGGGAGGATGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 72 bp | AGGGTCGCCAACAGGGACATCTTGGCCCAGACATCATaGACAGGGTCCCCCTTGGCTCACCCGACCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RVANRDILAQTS*TGSPLAHPTRQ Trigger: CTGCCTGGTCGGGTGAGCCAAGGGGGACCCTGTCCATGATGTCTGGGCCAAGATGTCCCTGTTGGCGACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CAA 90 bp | AGGATGAGGCTGGCATCCTCCCGCTGGCCGGGTCTTCTCCGCGAATaGGGATCTGCCTCCTGGGAGGATGATACCCGTGGCTGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RMRLASSRWPGLLRE*GSASWEDDTRGCCS Trigger: AGAGCAGCAGCCACGGGTATCATCCTCCCAGGAGGCAGATCCCAATTCGCGGAGAAGACCCGGCCAGCGGGAGGATGCCAGCCTCATCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
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| CDS CAA 90 bp | GCCAACAGGGACATCTTGGCCCAGACATCATGGACAGGGTCCCCCTaGGCTCACCCGACCAGGCAGGTAAGACTGTGGGGCCAGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: ANRDILAQTSWTGSP*AHPTRQVRLWGQQS Trigger: GCTTTGCTGGCCCCACAGTCTTACCTGCCTGGTCGGGTGAGCCAAGGGGGACCCTGTCCATGATGTCTGGGCCAAGATGTCCCTGTTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 72 bp | TCCCCCTTGGCTCACCCGACCAGGCAGGTAAGACTGTaGGGCCAGCAAAGCTCGTCACCTCACTCAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SPLAHPTRQVRL*GQQSSSPHSGT Trigger: TGTCCCTGAGTGAGGTGACGAGCTTTGCTGGCCCCACAGTCTTACCTGCCTGGTCGGGTGAGCCAAGGGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CCA 72 bp | ACAGAGGACCCTCCAGGGTCGCCAACAGGGACATCTTaGCCCAGACATCATGGACAGGGTCCCCCTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TEDPPGSPTGTS*PRHHGQGPPWL Trigger: GAGCCAAGGGGGACCCTGTCCATGATGTCTGGGCCAAGATGTCCCTGTTGGCGACCCTGGAGGGTCCTCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CAA 72 bp | GACATCTTGGCCCAGACATCATGGACAGGGTCCCCCTaGGCTCACCCGACCAGGCAGGTAAGACTGTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: DILAQTSWTGSP*AHPTRQVRLWG Trigger: GCCCCACAGTCTTACCTGCCTGGTCGGGTGAGCCAAGGGGGACCCTGTCCATGATGTCTGGGCCAAGATGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CAA 72 bp | GACAGAGGACCCTCCAGGGTCGCCAACAGGGACATCTaGGCCCAGACATCATGGACAGGGTCCCCCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DRGPSRVANRDI*AQTSWTGSPLA Trigger: AGCCAAGGGGGACCCTGTCCATGATGTCTGGGCCAAGATGTCCCTGTTGGCGACCCTGGAGGGTCCTCTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CAA 90 bp | CAAGCACAGAGGTCGTTCCTTCTGGAAAGAGTCCCAATCCCAGCCTaGAGGATGAGGCTGGCATCCTCCCGCTGGCCGGGTCTTCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QAQRSFLLERVPIPA*RMRLASSRWPGLLR Trigger: GCGGAGAAGACCCGGCCAGCGGGAGGATGCCAGCCTCATCCTCAAGGCTGGGATTGGGACTCTTTCCAGAAGGAACGACCTCTGTGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
||
| CDS CAA 90 bp | CCCTTGCTCTGGGCACACAGTATGGAACACACTTCCCGGCAGCCTTaGCAGCCCTGTGACTGCTCCAGGGCTACGCTCCAGCCATGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PLLWAHSMEHTSRQP*QPCDCSRATLQPCD Trigger: GTCACATGGCTGGAGCGTAGCCCTGGAGCAGTCACAGGGCTGCAAAGGCTGCCGGGAAGTGTGTTCCATACTGTGTGCCCAGAGCAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS TCA 72 bp | TCAATGCCAAGGGTATCCAGGACCGGACCGAGCTCCTaGTCTGCGCCACGGTCACACAGGGTCTCCACACAC | + |
|
Preference number: 6 (lower is better) Translates to: SMPRVSRTGPSS*SAPRSHRVSTH Trigger: GTGTGTGGAGACCCTGTGTGACCGTGGCGCAGATCAGGAGCTCGGTCCGGTCCTGGATACCCTTGGCATTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS GCA 72 bp | GGGCAACAAAAGCAAAGCTCCGTCGAGCTCCTGATCTaGGCCACGGTCACACAGGGTCTCCACACACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GQQKQSSVELLI*ATVTQGLHTPG Trigger: GCCTGGTGTGTGGAGACCCTGTGTGACCGTGGCGCAGATCAGGAGCTCGACGGAGCTTTGCTTTTGTTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641154.1 |
||
| CDS GCA 72 bp | GAACACACTTCCCGGCAGCCTTTGCAGCCCTGTGACTaGTCCAGGGCTACGCTCCAGCCATGTGACTACGCT | + |
|
Preference number: 6 (lower is better) Translates to: EHTSRQPLQPCD*SRATLQPCDYA Trigger: AGCGTAGTCACATGGCTGGAGCGTAGCCCTGGAGCAGTCACAGGGCTGCAAAGGCTGCCGGGAAGTGTGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS CAA 72 bp | TGGGCACACAGTATGGAACACACTTCCCGGCAGCCTTaGCAGCCCTGTGACTGCTCCAGGGCTACGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WAHSMEHTSRQP*QPCDCSRATLQ Trigger: CTGGAGCGTAGCCCTGGAGCAGTCACAGGGCTGCAAAGGCTGCCGGGAAGTGTGTTCCATACTGTGTGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS TCA 72 bp | TCTTCTCCGCGAATTGGGATCTGCCTCCTGGGAGGATaGTACCCGTGGCTGCTGCTCTGCGTGGCTCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSPRIGICLLGG*YPWLLLCVAHL Trigger: AAGGTGAGCCACGCAGAGCAGCAGCCACGGGTATCATCCTCCCAGGAGGCAGATCCCAATTCGCGGAGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
||
| CDS TCA 72 bp | CACTTGCATTACAACTACACGGGGGTGGTGGGTCCATaGGGAGCAGACCCCCTACGTGACCACAGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HLHYNYTGVVGP*GADPLRDHRSS Trigger: GCTGCTCCTGTGGTCACGTAGGGGGTCTGCTCCTCATGGACCCACCACCCCCGTGTAGTTGTAATGCAAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS GCA 72 bp | CAGTGTCCTGAGCCAGACACAGTGGCCACAGGTCCCTaGCAAGGGAGAAATCACGAGGTGCGACGAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: QCPEPDTVATGP*QGRNHEVRRTP Trigger: AGGTGTTCGTCGCACCTCGTGATTTCTCCCTTGGCAGGGACCTGTGGCCACTGTGTCTGGCTCAGGACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS CCA 72 bp | GACCCAGCCTTAGAGGTGCTCGTCGTGATCAGCACGTaGGGGAGTGTGGGAAGGACTGGGTTAGGACACACA | + |
|
Preference number: 6 (lower is better) Translates to: DPALEVLVVIST*GSVGRTGLGHT Trigger: TGTGTGTCCTAACCCAGTCCTTCCCACACTCCCCCACGTGCTGATCACGACGAGCACCTCTAAGGCTGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CCA 72 bp | CCACCAAACCCCTTCCCTTGCTCTGGGCACACAGTATaGAACACACTTCCCGGCAGCCTTTGCAGCCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PPNPFPCSGHTV*NTLPGSLCSPV Trigger: CACAGGGCTGCAAAGGCTGCCGGGAAGTGTGTTCCATACTGTGTGCCCAGAGCAAGGGAAGGGGTTTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS CAA 90 bp | CGTCACCTCACTCAGGGACAAAGACATCCTGCCCAAGCATGGGAGTaGGAGGTGAGGATGAGTGCCAGGTGCCTTCTTTGCCCCCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RHLTQGQRHPAQAWE*EVRMSARCLLCPLY Trigger: GTACAGGGGGCAAAGAAGGCACCTGGCACTCATCCTCACCTCCAACTCCCATGCTTGGGCAGGATGTCTTTGTCCCTGAGTGAGGTGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CCA 72 bp | CTGCCATGCTGGTGGAAAGGGCTCCAGATTGCCGTTTaGGAAGCCCCACTCTGGTCCATGAAAAGGCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: LPCWWKGLQIAV*EAPLWSMKRPM Trigger: CATGGGCCTTTTCATGGACCAGAGTGGGGCTTCCCAAACGGCAATCTGGAGCCCTTTCCACCAGCATGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641154.1 |
||
| CDS CCA 72 bp | GCCTGGTGTTTTGTCAGTGTCCTGAGCCAGACACAGTaGCCACAGGTCCCTGCCAAGGGAGAAATCACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AWCFVSVLSQTQ*PQVPAKGEITR Trigger: CCTCGTGATTTCTCCCTTGGCAGGGACCTGTGGCCACTGTGTCTGGCTCAGGACACTGACAAAACACCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS CAA 72 bp | CCTGCCATGCTGGTGGAAAGGGCTCCAGATTGCCGTTaGGGAAGCCCCACTCTGGTCCATGAAAAGGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PAMLVERAPDCR*GSPTLVHEKAH Trigger: ATGGGCCTTTTCATGGACCAGAGTGGGGCTTCCCAAACGGCAATCTGGAGCCCTTTCCACCAGCATGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641154.1 |
||
| CDS CAA 90 bp | CAGAAGGAGAGCGGTTTCTGGAGAGGCCCTCCCAGGACCCTGCCCTaGCTGCACTCAGGTCCCTGGTGTTTGGATTTCTGCTTCCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: QKESGFWRGPPRTLP*LHSGPWCLDFCFQI Trigger: AATTTGGAAGCAGAAATCCAAACACCAGGGACCTGAGTGCAGCAAGGGCAGGGTCCTGGGAGGGCCTCTCCAGAAACCGCTCTCCTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CCA 72 bp | TGCGTGGCTCACCTTGGCCAGGAGCTAGATTCCTGCTaGTGGGAAATGCATAGCCTACTTGCTGCACCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CVAHLGQELDSC*WEMHSLLAAPK Trigger: CTTGGGTGCAGCAAGTAGGCTATGCATTTCCCACCAGCAGGAATCTAGCTCCTGGCCAAGGTGAGCCACGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000669319.1 |
||
| CDS CCA 72 bp | TTCACTGGGGGACAGCCAGCCACACAACATGTCAGATaGGGTCACTGCTGCAGGACATGCGGGAAATTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FTGGQPATQHVR*GHCCRTCGKFR Trigger: CCTGAATTTCCCGCATGTCCTGCAGCAGTGACCCCATCTGACATGTTGTGTGGCTGGCTGTCCCCCAGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000641154.1 ENST00000666679.1 |
||
| CDS CCA 72 bp | CGTCGTGATCAGCACGTGGGGGAGTGTGGGAAGGACTaGGTTAGGACACACACAGACACACACCTAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RRDQHVGECGKD*VRTHTDTHLRQ Trigger: TTGCCTTAGGTGTGTGTCTGTGTGTGTCCTAACCCAGTCCTTCCCACACTCCCCCACGTGCTGATCACGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CAA 72 bp | TGGTGGAACTGGCAAACTCCCACCAAACCCCTTCCCTaGCTCTGGGCACACAGTATGGAACACACTTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WWNWQTPTKPLP*LWAHSMEHTSR Trigger: CCGGGAAGTGTGTTCCATACTGTGTGCCCAGAGCAAGGGAAGGGGTTTGGTGGGAGTTTGCCAGTTCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS TCA 72 bp | CTGCAGGACATGCGGGAAATTCAGGAGGAGTCCAGGTaGCTACCAGGATTGAGGCCTCATCCAAGGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LQDMREIQEESR*LPGLRPHPRSS Trigger: GGATGACCTTGGATGAGGCCTCAATCCTGGTAGTCACCTGGACTCCTCCTGAATTTCCCGCATGTCCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000641154.1 ENST00000666679.1 |
||
| CDS TCA 72 bp | AAACAAGAGGGGTGCTGGAGGCTGCAGTCAGGGTCATaGGCAACGTGTCCACTAGCATCCTTCATTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KQEGCWRLQSGS*ATCPLASFIPG Trigger: CCCAGGAATGAAGGATGCTAGTGGACACGTTGCTCATGACCCTGACTGCAGCCTCCAGCACCCCTCTTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS TCA 72 bp | TCCCCCTTTTCGGGAATAGCAAGCGAGTCCAAGAGATaGGGTCACGTGATGCCGTCCGACCAATCTGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPFSGIASESKR*GHVMPSDQSGV Trigger: CACACCAGATTGGTCGGACGGCATCACGTGACCTCATCTCTTGGACTCGCTTGCTATTCCCGAAAAGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654914.1 |
||
| CDS GCA 72 bp | AGCAACGTGTCCACTAGCATCCTTCATTCCTGGGCCTaGCATGCTGGTGGAAAGGGCTCCAGATTGCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SNVSTSILHSWA*HAGGKGSRLPF Trigger: AAACGGCAATCTGGAGCCCTTTCCACCAGCATGGCAGGCCCAGGAATGAAGGATGCTAGTGGACACGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS GCA 72 bp | CAAAGCTCGTCACCTCACTCAGGGACAAAGACATCCTaGCCAAGCATGGGAGTTGGAGGTGAGGATGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QSSSPHSGTKTS*PSMGVGGEDEC Trigger: GCACTCATCCTCACCTCCAACTCCCATGCTTGGGCAGGATGTCTTTGTCCCTGAGTGAGGTGACGAGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS CCA 72 bp | GTCATGAGCAACGTGTCCACTAGCATCCTTCATTCCTaGGCCTGCCATGCTGGTGGAAAGGGCTCCAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: VMSNVSTSILHS*ACHAGGKGSRL Trigger: CAATCTGGAGCCCTTTCCACCAGCATGGCAGGCCCAGGAATGAAGGATGCTAGTGGACACGTTGCTCATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS TCA 72 bp | GGAAAACGAAGAAACACACCCTGCCCTCCAGGGCTATaGTTTCACTGGGGGACAGCCAGCCACACAACATGT | + |
|
Preference number: 6 (lower is better) Translates to: GKRRNTPCPPGL*FHWGTASHTTC Trigger: ACATGTTGTGTGGCTGGCTGTCCCCCAGTGAAATCATAGCCCTGGAGGGCAGGGTGTGTTTCTTCGTTTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000641154.1 ENST00000666679.1 |
||
| CDS GCA 72 bp | ACACAACATGTCAGATGGGGTCACTGCTGCAGGACATaGGGGAAATTCAGGAGGAGTCCAGGTGACTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: TQHVRWGHCCRT*GKFRRSPGDYQ Trigger: CTGGTAGTCACCTGGACTCCTCCTGAATTTCCCGCATGTCCTGCAGCAGTGACCCCATCTGACATGTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641154.1 ENST00000666679.1 |
||
| CDS GCA 72 bp | CAGGCAGGTCTTCTACTCTCTCTCTCTTCCACTGTCTaGAGCCACATGTCAATGCCAAGGGTATCCAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: QAGLLLSLSSTV*SHMSMPRVSRT Trigger: GGTCCTGGATACCCTTGGCATTGACATGTGGCTGCAGACAGTGGAAGAGAGAGAGAGTAGAAGACCTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS TCA 72 bp | AAAAGGAAACCATCGCTGCCTTCTGCTCAGCAAAGATaGCCCCATCCTCCCTCCAGAAGGAGAGCGGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KRKPSLPSAQQR*PHPPSRRRAVS Trigger: AGAAACCGCTCTCCTTCTGGAGGGAGGATGGGGTCATCTTTGCTGAGCAGAAGGCAGCGATGGTTTCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
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| CDS TCA 72 bp | AGTCGTGGACTGGGAATGAAGTTGACGCATGCTGAGTaGGCTCAGGCAGGTCTTCTACTCTCTCTCTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRGLGMKLTHAE*AQAGLLLSLSS Trigger: GGAAGAGAGAGAGAGTAGAAGACCTGCCTGAGCTCACTCAGCATGCGTCAACTTCATTCCCAGTCCACGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS CCA 72 bp | TTGATTTCAATTGTCACAGCAGCGCTGTGGTGGAACTaGCAAACTCCCACCAAACCCCTTCCCTTGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LISIVTAALWWN*QTPTKPLPLLW Trigger: CCAGAGCAAGGGAAGGGGTTTGGTGGGAGTTTGCCAGTTCCACCACAGCGCTGCTGTGACAATTGAAATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS CAA 90 bp | CCAAGCATGGGAGTTGGAGGTGAGGATGAGTGCCAGGTGCCTTCTTaGCCCCCTGTACCCCTAACAAATAACTTTCTAATGCAAAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: PSMGVGGEDECQVPS*PPVPLTNNFLMQRP Trigger: GGGTCTTTGCATTAGAAAGTTATTTGTTAGGGGTACAGGGGGCAAAGAAGGCACCTGGCACTCATCCTCACCTCCAACTCCCATGCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS TCA 72 bp | AGGCAGTTCTCTGGCTCCCAGTGGTATCATCTGAGGTaGCTGAGCAGTAATCAGTTGATGGACGAACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RQFSGSQWYHLR*LSSNQLMDELE Trigger: CTCCAGTTCGTCCATCAACTGATTACTGCTCAGTCACCTCAGATGATACCACTGGGAGCCAGAGAACTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000641154.1 ENST00000654914.1 ENST00000666679.1 ENST00000669319.1 |
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| CDS CCA 72 bp | ACGTATGATTTCCTTGGCCAGGAGCTAGATTCCTGCTaGTGGGAAATGCATAGCCTACTTGCTGCACCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TYDFLGQELDSC*WEMHSLLAAPK Trigger: CTTGGGTGCAGCAAGTAGGCTATGCATTTCCCACCAGCAGGAATCTAGCTCCTGGCCAAGGAAATCATACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS GCA 72 bp | TGGAGACTTAGCATCTACAAGACCCAGTTTGACAACTaGCAGCGCCAGGGAATAAGTGAAGTTTCTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WRLSIYKTQFDN*QRQGISEVSQP Trigger: GGGCTGAGAAACTTCACTTATTCCCTGGCGCTGGCAGTTGTCAAACTGGGTCTTGTAGATGCTAAGTCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000450531.1 ENST00000669319.1 |
||
| CDS CCA 72 bp | GGGAAATGCATAGCCTACTTGCTGCACCCAAGCGCCTaGAGCTTTCATTCTGCAGCAGTTTCTTCAGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GKCIAYLLHPSA*SFHSAAVSSGK Trigger: TTTTCCTGAAGAAACTGCTGCAGAATGAAAGCTCCAGGCGCTTGGGTGCAGCAAGTAGGCTATGCATTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000450531.1 ENST00000654914.1 ENST00000666679.1 ENST00000669319.1 |
||
| CDS CCA 72 bp | TTCATGCATTTGATTTCAATTGTCACAGCAGCGCTGTaGTGGAACTGGCAAACTCCCACCAAACCCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FMHLISIVTAAL*WNWQTPTKPLP Trigger: GGGAAGGGGTTTGGTGGGAGTTTGCCAGTTCCACCACAGCGCTGCTGTGACAATTGAAATCAAATGCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS TCA 72 bp | TTGTGTGTCCCTCCCCCAGCGTTTCTAAGACCTGGCTaGTGTTTACAGTTCACTGTCATGTGTCTCTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: LCVPPPAFLRPG*CLQFTVMCLSL Trigger: AAGTGAGAGACACATGACAGTGAACTGTAAACATCAGCCAGGTCTTAGAAACGCTGGGGGAGGGACACACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CAA 72 bp | CACCTGACCTGTGTGAAAACCAGTCCCTTCATGCATTaGATTTCAATTGTCACAGCAGCGCTGTGGTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: HLTCVKTSPFMH*ISIVTAALWWN Trigger: GTTCCACCACAGCGCTGCTGTGACAATTGAAATCAAATGCATGAAGGGACTGGTTTTCACACAGGTCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS GCA 72 bp | AGTGTTGGAGGAAGCACACCCACCACTAACAAAGGATaGACAGTGGATCCTTTAAGACGCTTAAAGGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVGGSTPTTNKG*TVDPLRRLKDS Trigger: AGAGTCCTTTAAGCGTCTTAAAGGATCCACTGTGCATCCTTTGTTAGTGGTGGGTGTGCTTCCTCCAACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS TCA 72 bp | TCAGACCAGTGGGTGAAGCATAGATTGTCCTGTAAATaGTGGTATTGGGAAAACTGGCTAACCGCTGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: SDQWVKHRLSCK*WYWENWLTAGM Trigger: CATTCCAGCGGTTAGCCAGTTTTCCCAATACCATCATTTACAGGACAATCTATGCTTCACCCACTGGTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641154.1 |
||
| CDS TCA 72 bp | GCTCCAATGTGTGTTCCCAGGGACATCAGAGCAGAATaGGATCACTCAGAAGGAAACTTCTCTCTCATATCT | + |
|
Preference number: 6 (lower is better) Translates to: APMCVPRDIRAE*DHSEGNFSLIS Trigger: AGATATGAGAGAGAAGTTTCCTTCTGAGTGATCTCATTCTGCTCTGATGTCCCTGGGAACACACATTGGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666679.1 |
||
| CDS CCA 72 bp | CAGGGCTCCCAGAAAGAATATCCTACGATACCTCTATaGAGACTTAGCATCTACAAGACCCAGTTTGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: QGSQKEYPTIPL*RLSIYKTQFDN Trigger: GTTGTCAAACTGGGTCTTGTAGATGCTAAGTCTCCATAGAGGTATCGTAGGATATTCTTTCTGGGAGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000641154.1 ENST00000669319.1 |
||
| CDS CCA 72 bp | TTCTTCAGGAAAAAGGTCATCCCTACGATACCTCTATaGAGACTTAGCATCTACAAGACCCAGTTTGACAAC | + |
|
Preference number: 6 (lower is better) Translates to: FFRKKVIPTIPL*RLSIYKTQFDN Trigger: GTTGTCAAACTGGGTCTTGTAGATGCTAAGTCTCCATAGAGGTATCGTAGGGATGACCTTTTTCCTGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450531.1 |
||
| CDS CAA 72 bp | ATGCACAGTGGATCCTTTAAGACGCTTAAAGGACTCTaGGCCTCCAAACCTCACTTCCACAAAAGCTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: MHSGSFKTLKGL*ASKPHFHKSLF Trigger: AAATAAGCTTTTGTGGAAGTGAGGTTTGGAGGCCAAGAGTCCTTTAAGCGTCTTAAAGGATCCACTGTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654914.1 ENST00000669319.1 |
||
| CDS CAA 72 bp | CTGGGAAGAAAATCTCATTTGATACAAGTTGGGAATTaGGACTCTGACCTGAGAAAGGTAGGTTCTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: LGRKSHLIQVGN*DSDLRKVGSLI Trigger: AATCAGAGAACCTACCTTTCTCAGGTCAGAGTCCAAATTCCCAACTTGTATCAAATGAGATTTTCTTCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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| CDS TCA 72 bp | TACATAGGTGAATATTTGACTTACTCTGTGGCAGGGTaGGTTTTTCTAGCACAGTGTCAAAGTCATAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: YIGEYLTYSVAG*VFLAQCQSHKN Trigger: GTTTTTATGACTTTGACACTGTGCTAGAAAAACTCACCCTGCCACAGAGTAAGTCAAATATTCACCTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000641154.1 |
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| CDS TCA 72 bp | AAAATCTCATTTGATACAAGTTGGGAATTTGGACTCTaGCCTGAGAAAGGTAGGTTCTCTGATTCAGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: KISFDTSWEFGL*PEKGRFSDSVD Trigger: ATCTACTGAATCAGAGAACCTACCTTTCTCAGGTCAGAGTCCAAATTCCCAACTTGTATCAAATGAGATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666679.1 |
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