Pregenerated sensors for LINC02568 (Homo sapiens)
Ensembl gene IDs: ENSG00000259459Ensembl transcript IDs: ENST00000559379.5, ENST00000559821.2, ENST00000662408.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCTTGCCCTGCATGGGTTAAGAGGCCTGAGCTGGGGCAGGCCGGTTaGTCTGGCCTGGTGTCTGCCTCCCAGCTTGGAAGACCCCATCTT | + |
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Preference number: 5 (lower is better) Translates to: SCPAWVKRPELGQAG*SGLVSASQLGRPHL Trigger: AAGATGGGGTCTTCCAAGCTGGGAGGCAGACACCAGGCCAGAGCAACCGGCCTGCCCCAGCTCAGGCCTCTTAACCCATGCAGGGCAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS GCA 90 bp | TCTGGGGACAGGGCAGTTACTCTAGGTTCTTCTGTTCATAGGGCCTaGCCTGGCCCTCCTCTAGCCCTACCCTTCTCCATGGGTCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SGDRAVTLGSSVHRA*PGPPLALPFSMGQG Trigger: TCCTTGACCCATGGAGAAGGGTAGGGCTAGAGGAGGGCCAGGGCAGGCCCTATGAACAGAAGAACCTAGAGTAACTGCCCTGTCCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS CCA 90 bp | CTAGCCCTACCCTTCTCCATGGGTCAAGGATCTCATGGGCCCAAGTaGCTCTGTCCCACTAGACCCTCCTTGAGGCTCCAGAAACTCCCA | + |
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Preference number: 5 (lower is better) Translates to: LALPFSMGQGSHGPK*LCPTRPSLRLQKLP Trigger: TGGGAGTTTCTGGAGCCTCAAGGAGGGTCTAGTGGGACAGAGCCACTTGGGCCCATGAGATCCTTGACCCATGGAGAAGGGTAGGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS GCA 90 bp | CAAGCTCCCTTGGGTTCCACCCTCCAATACCCTCCCAAGTATACCTaGTCGGTGACAGGATCTGGGGACAGGGCAGTTACTCTAGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: QAPLGSTLQYPPKYT*SVTGSGDRAVTLGS Trigger: AGAACCTAGAGTAACTGCCCTGTCCCCAGATCCTGTCACCGAGCAGGTATACTTGGGAGGGTATTGGAGGGTGGAACCCAAGGGAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS CCA 90 bp | TTCAAGATGTGGGAGGCCATGAAAGAGGAGGGCTGCTTTCTTCTGTaGCAGGCTGTCTCTTCCGGCAGCTCCACAAGAGATCTGGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: FKMWEAMKEEGCFLL*QAVSSGSSTRDLGS Trigger: ACTCCCCAGATCTCTTGTGGAGCTGCCGGAAGAGACAGCCTGCCACAGAAGAAAGCAGCCCTCCTCTTTCATGGCCTCCCACATCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS CCA 90 bp | ATTTTCTCTGAACTTGCTTGGTCTTGTGTGGGTGCCCTGCAATTCTaGGGAAGGTCCTCATCCAGGGAGGAGGGAGAGTTCCAGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: IFSELAWSCVGALQF*GRSSSREEGEFQVR Trigger: CCTCACCTGGAACTCTCCCTCCTCCCTGGATGAGGACCTTCCCCAGAATTGCAGGGCACCCACACAAGACCAAGCAAGTTCAGAGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 90 bp | ACCTGTGTCAGGAATCAGAACTCCTGCCCCTCCCCTGTCCAGGTGTaGTCTCGCCATTGTTCCATCTGTGATGAGCACCCTTTATTCATG | + |
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Preference number: 5 (lower is better) Translates to: TCVRNQNSCPSPVQV*SRHCSICDEHPLFM Trigger: CATGAATAAAGGGTGCTCATCACAGATGGAACAATGGCGAGAGCACACCTGGACAGGGGAGGGGCAGGAGTTCTGATTCCTGACACAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000559379.5 ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 90 bp | GCTTGTGTTTGTTTCAAGATGTGGGAGGCCATGAAAGAGGAGGGCTaGTTTCTTCTGTGGCAGGCTGTCTCTTCCGGCAGCTCCACAAGA | + |
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Preference number: 5 (lower is better) Translates to: ACVCFKMWEAMKEEG*FLLWQAVSSGSSTR Trigger: TCTTGTGGAGCTGCCGGAAGAGACAGCCTGCCACAGAAGAAAGCAGCCCTCCTCTTTCATGGCCTCCCACATCTTGAAACAAACACAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 90 bp | AACAGAACATTCAACCAGGAAACCTGTGTCAGGAATCAGAACTCCTaGCCCTCCCCTGTCCAGGTGTGCTCTCGCCATTGTTCCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: NRTFNQETCVRNQNS*PSPVQVCSRHCSIC Trigger: ACAGATGGAACAATGGCGAGAGCACACCTGGACAGGGGAGGGGCAGGAGTTCTGATTCCTGACACAGGTTTCCTGGTTGAATGTTCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559379.5 ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 90 bp | AGGTTTCAATTTTCTCTGAACTTGCTTGGTCTTGTGTGGGTGCCCTaGAATTCTGGGGAAGGTCCTCATCCAGGGAGGAGGGAGAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: RFQFSLNLLGLVWVP*NSGEGPHPGRRESS Trigger: GGAACTCTCCCTCCTCCCTGGATGAGGACCTTCCCCAGAATTGCAGGGCACCCACACAAGACCAAGCAAGTTCAGAGAAAATTGAAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS CCA 90 bp | TCTGGGGAGTTGGCAGCAGGCCAGTTGCAGGAAGTAGACGGTAGTTaGAGCTCTGTGAACCAAACAGGTTCAATGAGGTGTAGTGAACAT | + |
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Preference number: 5 (lower is better) Translates to: SGELAAGQLQEVDGS*SSVNQTGSMRCSEH Trigger: ATGTTCACTACACCTCATTGAACCTGTTTGGTTCACAGAGCTCCAACTACCGTCTACTTCCTGCAACTGGCCTGCTGCCAACTCCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS CCA 90 bp | TCTGGGGAGTTGGCAGCAGGCCAGTTGCAGGAAGTAGACGGTAGTTaGAGCTCTACTGTGAACCAAACAGGTTCAATGAGGTGTAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: SGELAAGQLQEVDGS*SSTVNQTGSMRCSE Trigger: TTCACTACACCTCATTGAACCTGTTTGGTTCACAGTAGAGCTCCAACTACCGTCTACTTCCTGCAACTGGCCTGCTGCCAACTCCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662408.1 |
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| CDS GCA 90 bp | GAGAAGGCATTCCAGCTAAGATTTCTTTATGCGTCTCAGCAGTCTTaGCACGCTGTGTCTTCTTGGGGAAGTGTCTCTAGTTTGCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: EKAFQLRFLYASQQS*HAVSSWGSVSSLLA Trigger: AGCTAGCAAACTAGAGACACTTCCCCAAGAAGACACAGCGTGGCAAGACTGCTGAGACGCATAAAGAAATCTTAGCTGGAATGCCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559379.5 |
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| CDS GCA 90 bp | GACTCATTGCTTGGATCTGGAGTAAATCCTTCTATGTTTTGGGACTaGATCCTTTTTAAGCTCTATGCACCAGCTGCTGCAACCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: DSLLGSGVNPSMFWD*ILFKLYAPAAATST Trigger: GGTGCTGGTTGCAGCAGCTGGTGCATAGAGCTTAAAAAGGATGCAGTCCCAAAACATAGAAGGATTTACTCCAGATCCAAGCAATGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS CCA 90 bp | GTTCCTGACTCATTGCTTGGATCTGGAGTAAATCCTTCTATGTTTTaGGACTGCATCCTTTTTAAGCTCTATGCACCAGCTGCTGCAACC | + |
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Preference number: 5 (lower is better) Translates to: VPDSLLGSGVNPSMF*DCILFKLYAPAAAT Trigger: GGTTGCAGCAGCTGGTGCATAGAGCTTAAAAAGGATGCAGTCCCAAAACATAGAAGGATTTACTCCAGATCCAAGCAATGAGTCAGGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS CCA 90 bp | TGTGCTCTCGCCATTGTTCCATCTGTGATGAGCACCCTTTATTCATaGCTTGGGATCTCCCAATCCATCACTTTGAAAATCAAGATTCTG | + |
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Preference number: 5 (lower is better) Translates to: CALAIVPSVMSTLYS*LGISQSITLKIKIL Trigger: CAGAATCTTGATTTTCAAAGTGATGGATTGGGAGATCCCAAGCCATGAATAAAGGGTGCTCATCACAGATGGAACAATGGCGAGAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559379.5 ENST00000559821.2 ENST00000662408.1 |
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| CDS CCA 90 bp | TCTCGCCATTGTTCCATCTGTGATGAGCACCCTTTATTCATGGCTTaGGATCTCCCAATCCATCACTTTGAAAATCAAGATTCTGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SRHCSICDEHPLFMA*DLPIHHFENQDSEK Trigger: CTTCTCAGAATCTTGATTTTCAAAGTGATGGATTGGGAGATCCCAAGCCATGAATAAAGGGTGCTCATCACAGATGGAACAATGGCGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559379.5 ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 90 bp | GTTCAGCAAGGATGTCAAGAAGAAGATCTGTTTAGAAAACTCAGTTaGATTCTTCTACAACAGAACATTCAACCAGGAAACCTGTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: VQQGCQEEDLFRKLS*ILLQQNIQPGNLCQ Trigger: CTGACACAGGTTTCCTGGTTGAATGTTCTGTTGTAGAAGAATGCAACTGAGTTTTCTAAACAGATCTTCTTCTTGACATCCTTGCTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559379.5 ENST00000559821.2 ENST00000662408.1 |
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| CDS TCA 90 bp | TATTTGATTTCATGTTATGTTAGCTTGATTTATAAGTTTAAATACTaGGGCATGTGGTCCGTGGCCTCTGTTTATACTCTTGCCCTGCAT | + |
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Preference number: 5 (lower is better) Translates to: YLISCYVSLIYKFKY*GMWSVASVYTLALH Trigger: ATGCAGGGCAAGAGTATAAACAGAGGCCACGGACCACATGCCTCAGTATTTAAACTTATAAATCAAGCTAACATAACATGAAATCAAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS GCA 90 bp | AAGTCAGAATTAGAAATCAGATCTGCTTTATTCCTAAATTCTTCATaGCCGTTCAGCAAGGATGTCAAGAAGAAGATCTGTTTAGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: KSELEIRSALFLNSS*PFSKDVKKKICLEN Trigger: GTTTTCTAAACAGATCTTCTTCTTGACATCCTTGCTGAACGGGCATGAAGAATTTAGGAATAAAGCAGATCTGATTTCTAATTCTGACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662408.1 |
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| CDS CCA 72 bp | GGCAGGCTGTCTCTTCCGGCAGCTCCACAAGAGATCTaGGGAGTTGGCAGCAGGCCAGTTGCAGGAAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GRLSLPAAPQEI*GVGSRPVAGSR Trigger: TCTACTTCCTGCAACTGGCCTGCTGCCAACTCCCCAGATCTCTTGTGGAGCTGCCGGAAGAGACAGCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS CCA 72 bp | CCCTTCTCCATGGGTCAAGGATCTCATGGGCCCAAGTaGCTCTGTCCCACTAGACCCTCCTTGAGGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PFSMGQGSHGPK*LCPTRPSLRLQ Trigger: CTGGAGCCTCAAGGAGGGTCTAGTGGGACAGAGCCACTTGGGCCCATGAGATCCTTGACCCATGGAGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS CAA 90 bp | GTGGCAGGCTGTCTCTTCCGGCAGCTCCACAAGAGATCTGGGGAGTaGGCAGCAGGCCAGTTGCAGGAAGTAGACGGTAGTTGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VAGCLFRQLHKRSGE*AAGQLQEVDGSWSS Trigger: AGAGCTCCAACTACCGTCTACTTCCTGCAACTGGCCTGCTGCCAACTCCCCAGATCTCTTGTGGAGCTGCCGGAAGAGACAGCCTGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS TCA 72 bp | ATGGGCCCAAGTGGCTCTGTCCCACTAGACCCTCCTTaGGGCTCCAGAAACTCCCAAGTTTCCTGCCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: MGPSGSVPLDPP*GSRNSQVSCPR Trigger: TCTTGGGCAGGAAACTTGGGAGTTTCTGGAGCCTCAAGGAGGGTCTAGTGGGACAGAGCCACTTGGGCCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS GCA 72 bp | AGGAATCAGAACTCCTGCCCCTCCCCTGTCCAGGTGTaGTCTCGCCATTGTTCCATCTGTGATGAGCACCCT | + |
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Preference number: 6 (lower is better) Translates to: RNQNSCPSPVQV*SRHCSICDEHP Trigger: AGGGTGCTCATCACAGATGGAACAATGGCGAGAGCACACCTGGACAGGGGAGGGGCAGGAGTTCTGATTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000559379.5 ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 72 bp | AGGGCAGTTACTCTAGGTTCTTCTGTTCATAGGGCCTaGCCTGGCCCTCCTCTAGCCCTACCCTTCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RAVTLGSSVHRA*PGPPLALPFSM Trigger: CATGGAGAAGGGTAGGGCTAGAGGAGGGCCAGGGCAGGCCCTATGAACAGAAGAACCTAGAGTAACTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS CCA 72 bp | GAACTTGCTTGGTCTTGTGTGGGTGCCCTGCAATTCTaGGGAAGGTCCTCATCCAGGGAGGAGGGAGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ELAWSCVGALQF*GRSSSREEGEF Trigger: GAACTCTCCCTCCTCCCTGGATGAGGACCTTCCCCAGAATTGCAGGGCACCCACACAAGACCAAGCAAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS CAA 90 bp | TTCCGGCAGCTCCACAAGAGATCTGGGGAGTTGGCAGCAGGCCAGTaGCAGGAAGTAGACGGTAGTTGGAGCTCTGTGAACCAAACAGGT | + |
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Preference number: 6 (lower is better) Translates to: FRQLHKRSGELAAGQ*QEVDGSWSSVNQTG Trigger: ACCTGTTTGGTTCACAGAGCTCCAACTACCGTCTACTTCCTGCAACTGGCCTGCTGCCAACTCCCCAGATCTCTTGTGGAGCTGCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS GCA 72 bp | TTCAACCAGGAAACCTGTGTCAGGAATCAGAACTCCTaGCCCTCCCCTGTCCAGGTGTGCTCTCGCCATTGT | + |
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Preference number: 6 (lower is better) Translates to: FNQETCVRNQNS*PSPVQVCSRHC Trigger: ACAATGGCGAGAGCACACCTGGACAGGGGAGGGGCAGGAGTTCTGATTCCTGACACAGGTTTCCTGGTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559379.5 ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 72 bp | TGTTTCAAGATGTGGGAGGCCATGAAAGAGGAGGGCTaGTTTCTTCTGTGGCAGGCTGTCTCTTCCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CFKMWEAMKEEG*FLLWQAVSSGS Trigger: GCTGCCGGAAGAGACAGCCTGCCACAGAAGAAAGCAGCCCTCCTCTTTCATGGCCTCCCACATCTTGAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS CAA 72 bp | CTCCACAAGAGATCTGGGGAGTTGGCAGCAGGCCAGTaGCAGGAAGTAGACGGTAGTTGGAGCTCTGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LHKRSGELAAGQ*QEVDGSWSSVN Trigger: GTTCACAGAGCTCCAACTACCGTCTACTTCCTGCAACTGGCCTGCTGCCAACTCCCCAGATCTCTTGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS CAA 90 bp | TTCCGGCAGCTCCACAAGAGATCTGGGGAGTTGGCAGCAGGCCAGTaGCAGGAAGTAGACGGTAGTTGGAGCTCTACTGTGAACCAAACA | + |
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Preference number: 6 (lower is better) Translates to: FRQLHKRSGELAAGQ*QEVDGSWSSTVNQT Trigger: TGTTTGGTTCACAGTAGAGCTCCAACTACCGTCTACTTCCTGCAACTGGCCTGCTGCCAACTCCCCAGATCTCTTGTGGAGCTGCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662408.1 |
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| CDS GCA 72 bp | TTTTCTCTGAACTTGCTTGGTCTTGTGTGGGTGCCCTaGAATTCTGGGGAAGGTCCTCATCCAGGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSLNLLGLVWVP*NSGEGPHPGRR Trigger: CCTCCTCCCTGGATGAGGACCTTCCCCAGAATTGCAGGGCACCCACACAAGACCAAGCAAGTTCAGAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS CAA 90 bp | CAGCAGTCTTGCCACGCTGTGTCTTCTTGGGGAAGTGTCTCTAGTTaGCTAGCTGAATTGCCGTGGGTGAGAACTATGAAGCCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: QQSCHAVSSWGSVSS*LAELPWVRTMKPWL Trigger: CAGCCAAGGCTTCATAGTTCTCACCCACGGCAATTCAGCTAGCAAACTAGAGACACTTCCCCAAGAAGACACAGCGTGGCAAGACTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559379.5 |
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| CDS CAA 90 bp | CACGCTGTGTCTTCTTGGGGAAGTGTCTCTAGTTTGCTAGCTGAATaGCCGTGGGTGAGAACTATGAAGCCTTGGCTGACTACCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HAVSSWGSVSSLLAE*PWVRTMKPWLTTCS Trigger: AGAGCAGGTAGTCAGCCAAGGCTTCATAGTTCTCACCCACGGCAATTCAGCTAGCAAACTAGAGACACTTCCCCAAGAAGACACAGCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559379.5 |
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| CDS CAA 90 bp | CAGCCAACCCTGGTTCTGAGAGCCCTGGGAAGGGAATTTCAACAATaGGGAACCAAACCTGGTGAATCAGGCTGGGACTCAAGCTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: QPTLVLRALGREFQQ*GTKPGESGWDSSFC Trigger: ACAAAAGCTTGAGTCCCAGCCTGATTCACCAGGTTTGGTTCCCAATTGTTGAAATTCCCTTCCCAGGGCTCTCAGAACCAGGGTTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS CCA 72 bp | TGGGGAAGTGTCTCTAGTTTGCTAGCTGAATTGCCGTaGGTGAGAACTATGAAGCCTTGGCTGACTACCTGC | + |
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Preference number: 6 (lower is better) Translates to: WGSVSSLLAELP*VRTMKPWLTTC Trigger: GCAGGTAGTCAGCCAAGGCTTCATAGTTCTCACCCACGGCAATTCAGCTAGCAAACTAGAGACACTTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559379.5 |
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| CDS CCA 72 bp | TATGCGTCTCAGCAGTCTTGCCACGCTGTGTCTTCTTaGGGAAGTGTCTCTAGTTTGCTAGCTGAATTGCCG | + |
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Preference number: 6 (lower is better) Translates to: YASQQSCHAVSS*GSVSSLLAELP Trigger: CGGCAATTCAGCTAGCAAACTAGAGACACTTCCCCAAGAAGACACAGCGTGGCAAGACTGCTGAGACGCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559379.5 |
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| CDS CCA 72 bp | TTGGCAGCAGGCCAGTTGCAGGAAGTAGACGGTAGTTaGAGCTCTGTGAACCAAACAGGTTCAATGAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: LAAGQLQEVDGS*SSVNQTGSMRC Trigger: ACACCTCATTGAACCTGTTTGGTTCACAGAGCTCCAACTACCGTCTACTTCCTGCAACTGGCCTGCTGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS CCA 72 bp | ACACTTTTCTTTCCTAGTGCCTTGGGCAAGCTCCCTTaGGTTCCACCCTCCAATACCCTCCCAAGTATACCT | + |
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Preference number: 6 (lower is better) Translates to: TLFFPSALGKLP*VPPSNTLPSIP Trigger: AGGTATACTTGGGAGGGTATTGGAGGGTGGAACCCAAGGGAGCTTGCCCAAGGCACTAGGAAAGAAAAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS CCA 72 bp | TTGGCAGCAGGCCAGTTGCAGGAAGTAGACGGTAGTTaGAGCTCTACTGTGAACCAAACAGGTTCAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: LAAGQLQEVDGS*SSTVNQTGSMR Trigger: CCTCATTGAACCTGTTTGGTTCACAGTAGAGCTCCAACTACCGTCTACTTCCTGCAACTGGCCTGCTGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662408.1 |
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| CDS CAA 72 bp | TGCCACGCTGTGTCTTCTTGGGGAAGTGTCTCTAGTTaGCTAGCTGAATTGCCGTGGGTGAGAACTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: CHAVSSWGSVSS*LAELPWVRTMK Trigger: CTTCATAGTTCTCACCCACGGCAATTCAGCTAGCAAACTAGAGACACTTCCCCAAGAAGACACAGCGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559379.5 |
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| CDS CAA 90 bp | GGGAGAGTTCCAGGTGAGGGCATCAGGCTTTCTGTTCCTGACTCATaGCTTGGATCTGGAGTAAATCCTTCTATGTTTTGGGACTGCATC | + |
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Preference number: 6 (lower is better) Translates to: GRVPGEGIRLSVPDS*LGSGVNPSMFWDCI Trigger: GATGCAGTCCCAAAACATAGAAGGATTTACTCCAGATCCAAGCAATGAGTCAGGAACAGAAAGCCTGATGCCCTCACCTGGAACTCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 72 bp | TTCCAGCTAAGATTTCTTTATGCGTCTCAGCAGTCTTaGCACGCTGTGTCTTCTTGGGGAAGTGTCTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: FQLRFLYASQQS*HAVSSWGSVSS Trigger: ACTAGAGACACTTCCCCAAGAAGACACAGCGTGGCAAGACTGCTGAGACGCATAAAGAAATCTTAGCTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559379.5 |
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| CDS TCA 72 bp | GGGAAGGGAATTTCAACAATTGGGAACCAAACCTGGTaGATCAGGCTGGGACTCAAGCTTTTGTTTTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GKGISTIGNQTW*IRLGLKLLFCL Trigger: CAAACAAAACAAAAGCTTGAGTCCCAGCCTGATTCACCAGGTTTGGTTCCCAATTGTTGAAATTCCCTTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS GCA 72 bp | CTTGGATCTGGAGTAAATCCTTCTATGTTTTGGGACTaGATCCTTTTTAAGCTCTATGCACCAGCTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LGSGVNPSMFWD*ILFKLYAPAAA Trigger: TGCAGCAGCTGGTGCATAGAGCTTAAAAAGGATGCAGTCCCAAAACATAGAAGGATTTACTCCAGATCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS CCA 72 bp | TGTTCCATCTGTGATGAGCACCCTTTATTCATGGCTTaGGATCTCCCAATCCATCACTTTGAAAATCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: CSICDEHPLFMA*DLPIHHFENQD Trigger: ATCTTGATTTTCAAAGTGATGGATTGGGAGATCCCAAGCCATGAATAAAGGGTGCTCATCACAGATGGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559379.5 ENST00000559821.2 ENST00000662408.1 |
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| CDS CCA 72 bp | TCATTGCTTGGATCTGGAGTAAATCCTTCTATGTTTTaGGACTGCATCCTTTTTAAGCTCTATGCACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLLGSGVNPSMF*DCILFKLYAPA Trigger: AGCTGGTGCATAGAGCTTAAAAAGGATGCAGTCCCAAAACATAGAAGGATTTACTCCAGATCCAAGCAATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 72 bp | GGATGTCAAGAAGAAGATCTGTTTAGAAAACTCAGTTaGATTCTTCTACAACAGAACATTCAACCAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: GCQEEDLFRKLS*ILLQQNIQPGN Trigger: GTTTCCTGGTTGAATGTTCTGTTGTAGAAGAATGCAACTGAGTTTTCTAAACAGATCTTCTTCTTGACATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000559379.5 ENST00000559821.2 ENST00000662408.1 |
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| CDS GCA 72 bp | TTAGAAATCAGATCTGCTTTATTCCTAAATTCTTCATaGCCGTTCAGCAAGGATGTCAAGAAGAAGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: LEIRSALFLNSS*PFSKDVKKKIC Trigger: ACAGATCTTCTTCTTGACATCCTTGCTGAACGGGCATGAAGAATTTAGGAATAAAGCAGATCTGATTTCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662408.1 |
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| CDS TCA 72 bp | TCATGTTATGTTAGCTTGATTTATAAGTTTAAATACTaGGGCATGTGGTCCGTGGCCTCTGTTTATACTCTT | + |
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Preference number: 6 (lower is better) Translates to: SCYVSLIYKFKY*GMWSVASVYTL Trigger: AAGAGTATAAACAGAGGCCACGGACCACATGCCTCAGTATTTAAACTTATAAATCAAGCTAACATAACATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559821.2 |
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| CDS GCA 72 bp | TTAGAAATCAGATCTGCTTTATTCCTAAATTCTTCATaGCCCTTGGAAAATAGACATTTCTTTGGGCAAACT | + |
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Preference number: 6 (lower is better) Translates to: LEIRSALFLNSS*PLENRHFFGQT Trigger: AGTTTGCCCAAAGAAATGTCTATTTTCCAAGGGGCATGAAGAATTTAGGAATAAAGCAGATCTGATTTCTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559379.5 |
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