Pregenerated sensors for LINC02565 (Homo sapiens)
Ensembl gene IDs: ENSG00000267726Ensembl transcript IDs: ENST00000592678.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCAACCGATAGACCATTCAGTGGTGGAACTCCCTGTATGTTGATATaGAATCATCTTCAAGACCCAGCTTTCTCGCAATTAACAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PTDRPFSGGTPCMLI*NHLQDPAFSQLTVF Trigger: GAAGACTGTTAATTGCGAGAAAGCTGGGTCTTGAAGATGATTCCATATCAACATACAGGGAGTTCCACCACTGAATGGTCTATCGGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 90 bp | TGCCATGCTCACTGGCCCAGGGCTTCATTTGGTTTCAAGGCTGCCTaGTCTTCAAGGGTCCTTGTCTTCCTTGTGTTGCTCCAGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: CHAHWPRASFGFKAA*SSRVLVFLVLLQDP Trigger: AGGATCCTGGAGCAACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAGCCTTGAAACCAAATGAAGCCCTGGGCCAGTGAGCATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 72 bp | CACTGGCCCAGGGCTTCATTTGGTTTCAAGGCTGCCTaGTCTTCAAGGGTCCTTGTCTTCCTTGTGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: HWPRASFGFKAA*SSRVLVFLVLL Trigger: GAGCAACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAGCCTTGAAACCAAATGAAGCCCTGGGCCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS GCA 72 bp | TGCTCACTGGCCCAGGGCTTCATTTGGTTTCAAGGCTaGCTTGTCTTCAAGGGTCCTTGTCTTCCTTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: CSLAQGFIWFQG*LVFKGPCLPCV Trigger: AACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAGCCTTGAAACCAAATGAAGCCCTGGGCCAGTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 90 bp | GGTTTCAAGGCTGCCTTGTCTTCAAGGGTCCTTGTCTTCCTTGTGTaGCTCCAGGATCCTGGTCAGACTACTTATCAACCATGTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GFKAALSSRVLVFLV*LQDPGQTTYQPCGL Trigger: CAAGCCACATGGTTGATAAGTAGTCTGACCAGGATCCTGGAGCAACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAGCCTTGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 90 bp | CCAGGGCTTCATTTGGTTTCAAGGCTGCCTTGTCTTCAAGGGTCCTaGTCTTCCTTGTGTTGCTCCAGGATCCTGGTCAGACTACTTATC | + |
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Preference number: 6 (lower is better) Translates to: PGLHLVSRLPCLQGS*SSLCCSRILVRLLI Trigger: GATAAGTAGTCTGACCAGGATCCTGGAGCAACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAGCCTTGAAACCAAATGAAGCCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 72 bp | GCTGCCTTGTCTTCAAGGGTCCTTGTCTTCCTTGTGTaGCTCCAGGATCCTGGTCAGACTACTTATCAACCA | + |
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Preference number: 6 (lower is better) Translates to: AALSSRVLVFLV*LQDPGQTTYQP Trigger: TGGTTGATAAGTAGTCTGACCAGGATCCTGGAGCAACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 72 bp | TCAAGGCTGCCTTGTCTTCAAGGGTCCTTGTCTTCCTaGTGTTGCTCCAGGATCCTGGTCAGACTACTTATC | + |
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Preference number: 6 (lower is better) Translates to: SRLPCLQGSLSS*CCSRILVRLLI Trigger: GATAAGTAGTCTGACCAGGATCCTGGAGCAACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAGCCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 72 bp | CATTTGGTTTCAAGGCTGCCTTGTCTTCAAGGGTCCTaGTCTTCCTTGTGTTGCTCCAGGATCCTGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: HLVSRLPCLQGS*SSLCCSRILVR Trigger: TCTGACCAGGATCCTGGAGCAACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAGCCTTGAAACCAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS GCA 72 bp | CTGCCTTGTCTTCAAGGGTCCTTGTCTTCCTTGTGTTaGTCCAGGATCCTGGTCAGACTACTTATCAACCAT | + |
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Preference number: 6 (lower is better) Translates to: LPCLQGSLSSLC*SRILVRLLINH Trigger: ATGGTTGATAAGTAGTCTGACCAGGATCCTGGAGCAACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 90 bp | CATTTGGTTTCAAGGCTGCCTTGTCTTCAAGGGTCCTTGTCTTCCTaGTGTTGCTCCAGGATCCTGGTCAGACTACTTATCAACCATGTG | + |
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Preference number: 6 (lower is better) Translates to: HLVSRLPCLQGSLSS*CCSRILVRLLINHV Trigger: CACATGGTTGATAAGTAGTCTGACCAGGATCCTGGAGCAACACAAGGAAGACAAGGACCCTTGAAGACAAGGCAGCCTTGAAACCAAATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS TCA 72 bp | CCGATAGACCATTCAGTGGTGGAACTCCCTGTATGTTaGTATGGAATCATCTTCAAGACCCAGCTTTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: PIDHSVVELPVC*YGIIFKTQLSR Trigger: GCGAGAAAGCTGGGTCTTGAAGATGATTCCATATCAACATACAGGGAGTTCCACCACTGAATGGTCTATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CCA 72 bp | AAGGGTCCTTGTCTTCCTTGTGTTGCTCCAGGATCCTaGTCAGACTACTTATCAACCATGTGGCTTGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: KGPCLPCVAPGS*SDYLSTMWLEK Trigger: TTTTTCAAGCCACATGGTTGATAAGTAGTCTGACCAGGATCCTGGAGCAACACAAGGAAGACAAGGACCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 72 bp | ACCGATAGACCATTCAGTGGTGGAACTCCCTGTATGTaGATATGGAATCATCTTCAAGACCCAGCTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: TDRPFSGGTPCM*IWNHLQDPAFS Trigger: CGAGAAAGCTGGGTCTTGAAGATGATTCCATATCAACATACAGGGAGTTCCACCACTGAATGGTCTATCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CAA 90 bp | GCATTCCCAACCGATAGACCATTCAGTGGTGGAACTCCCTGTATGTaGATATGGAATCATCTTCAAGACCCAGCTTTCTCGCAATTAACA | + |
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Preference number: 6 (lower is better) Translates to: AFPTDRPFSGGTPCM*IWNHLQDPAFSQLT Trigger: TGTTAATTGCGAGAAAGCTGGGTCTTGAAGATGATTCCATATCAACATACAGGGAGTTCCACCACTGAATGGTCTATCGGTTGGGAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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| CDS CCA 72 bp | AGACCATTCAGTGGTGGAACTCCCTGTATGTTGATATaGAATCATCTTCAAGACCCAGCTTTCTCGCAATTA | + |
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Preference number: 6 (lower is better) Translates to: RPFSGGTPCMLI*NHLQDPAFSQL Trigger: TAATTGCGAGAAAGCTGGGTCTTGAAGATGATTCCATATCAACATACAGGGAGTTCCACCACTGAATGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592678.1 |
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