Pregenerated sensors for LINC02562 (Homo sapiens)

Ensembl gene IDs: ENSG00000260265

Ensembl transcript IDs: ENST00000561705.1, ENST00000562355.1, ENST00000563602.1, ENST00000567197.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TGCTTTATAGACCAGGAAATTGAAGACAGTTTCACCCAGTCACAATaGACCCTGTTTCATCATGTCTCAACATGGCCTTCATCAATGCAC	+
Preference number: 5 (lower is better) Translates to: CFIDQEIEDSFTQSQ*TLFHHVSTWPSSMH Trigger: GTGCATTGATGAAGGCCATGTTGAGACATGATGAAACAGGGTCCATTGTGACTGGGTGAAACTGTCTTCAATTTCCTGGTCTATAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561705.1
CDS CCA 90 bp	AGTTTCACCCAGTCACAATGGACCCTGTTTCATCATGTCTCAACATaGCCTTCATCAATGCACTCTGTGATCTCTTATAATTATATAGTG	+
Preference number: 5 (lower is better) Translates to: SFTQSQWTLFHHVST*PSSMHSVISYNYIV Trigger: CACTATATAATTATAAGAGATCACAGAGTGCATTGATGAAGGCCATGTTGAGACATGATGAAACAGGGTCCATTGTGACTGGGTGAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561705.1
CDS CCA 72 bp	GACCAGGAAATTGAAGACAGTTTCACCCAGTCACAATaGACCCTGTTTCATCATGTCTCAACATGGCCTTCA	+
Preference number: 6 (lower is better) Translates to: DQEIEDSFTQSQ*TLFHHVSTWPS Trigger: TGAAGGCCATGTTGAGACATGATGAAACAGGGTCCATTGTGACTGGGTGAAACTGTCTTCAATTTCCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561705.1
CDS TCA 72 bp	TTCTGCTTTCTGCTGGTAGTATCTGAGGTCCATCACTaGACTTCTCTGTGCTTCATTTTCCACCTGCAAAAC	+
Preference number: 6 (lower is better) Translates to: FCFLLVVSEVHH*TSLCFIFHLQN Trigger: GTTTTGCAGGTGGAAAATGAAGCACAGAGAAGTTCAGTGATGGACCTCAGATACTACCAGCAGAAAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567197.1
CDS TCA 72 bp	TTCTGCTTTCTGCTGGTAGTATCTGAGGTCCATCACTaGACTTCTCTGTGCTTCATTTTCCACCTTAGAATC	+
Preference number: 6 (lower is better) Translates to: FCFLLVVSEVHH*TSLCFIFHLRI Trigger: GATTCTAAGGTGGAAAATGAAGCACAGAGAAGTTCAGTGATGGACCTCAGATACTACCAGCAGAAAGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563602.1
CDS TCA 72 bp	GAAATCCTAGCTCTTCTGCTTTCTGCTGGTAGTATCTaGGGTCCATCACTGAACTTCTCTGTGCTTCATTTT	+
Preference number: 6 (lower is better) Translates to: EILALLLSAGSI*GPSLNFSVLHF Trigger: AAAATGAAGCACAGAGAAGTTCAGTGATGGACCTCAGATACTACCAGCAGAAAGCAGAAGAGCTAGGATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000561705.1 ENST00000562355.1 ENST00000563602.1 ENST00000567197.1

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