Pregenerated sensors for LINC02561 (Homo sapiens)

Ensembl gene IDs: ENSG00000224034

Ensembl transcript IDs: ENST00000449457.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AACAGTTTTCTGTTTGCTCATATAGCCTCCAGTGGTATACTGAGTTaGTCACAACTCTCATTCTTTCAGCCTGTTTTCTTGAAATTAAAC	+
Preference number: 5 (lower is better) Translates to: NSFLFAHIASSGILS*SQLSFFQPVFLKLN Trigger: GTTTAATTTCAAGAAAACAGGCTGAAAGAATGAGAGTTGTGACCAACTCAGTATACCACTGGAGGCTATATGAGCAAACAGAAAACTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449457.1
CDS TCA 72 bp	GATGTTCCTATAGATAATCACAAGGAACACTGTGCATaGGGCCTGACTGCCCTCAGCACCCCTTCTGGCGGC	+
Preference number: 6 (lower is better) Translates to: DVPIDNHKEHCA*GLTALSTPSGG Trigger: GCCGCCAGAAGGGGTGCTGAGGGCAGTCAGGCCTCATGCACAGTGTTCCTTGTGATTATCTATAGGAACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449457.1
CDS CCA 72 bp	CTGTTTGCTCATATAGCCTCCAGTGGTATACTGAGTTaGTCACAACTCTCATTCTTTCAGCCTGTTTTCTTG	+
Preference number: 6 (lower is better) Translates to: LFAHIASSGILS*SQLSFFQPVFL Trigger: CAAGAAAACAGGCTGAAAGAATGAGAGTTGTGACCAACTCAGTATACCACTGGAGGCTATATGAGCAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449457.1
CDS GCA 72 bp	CTGACAGTTTCTACAGGGTCAATGAAGGGGGTCGAATaGAGAAGTAAAGACAAAGACGAAAAGACCTATTTT	+
Preference number: 6 (lower is better) Translates to: LTVSTGSMKGVE*RSKDKDEKTYF Trigger: AAAATAGGTCTTTTCGTCTTTGTCTTTACTTCTGCATTCGACCCCCTTCATTGACCCTGTAGAAACTGTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449457.1

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