Pregenerated sensors for LINC02559 (Homo sapiens)

Ensembl gene IDs: ENSG00000236464

Ensembl transcript IDs: ENST00000420391.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTCCAACTGAAAGTTTACAGAATACAAAGTGAGCCTGTAAGATGGTaGCCACTCTCCAGAGGCTTGTTGGTCAGACAGGAAAGAAAACCA	+
Preference number: 5 (lower is better) Translates to: FQLKVYRIQSEPVRW*PLSRGLLVRQERKP Trigger: TGGTTTTCTTTCCTGTCTGACCAACAAGCCTCTGGAGAGTGGCCACCATCTTACAGGCTCACTTTGTATTCTGTAAACTTTCAGTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420391.1
CDS CCA 90 bp	ATTTTCCAACTGAAAGTTTACAGAATACAAAGTGAGCCTGTAAGATaGTGGCCACTCTCCAGAGGCTTGTTGGTCAGACAGGAAAGAAAA	+
Preference number: 5 (lower is better) Translates to: IFQLKVYRIQSEPVR*WPLSRGLLVRQERK Trigger: TTTTCTTTCCTGTCTGACCAACAAGCCTCTGGAGAGTGGCCACCATCTTACAGGCTCACTTTGTATTCTGTAAACTTTCAGTTGGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420391.1
CDS CAA 72 bp	GAGCCTGTAAGATGGTGGCCACTCTCCAGAGGCTTGTaGGTCAGACAGGAAAGAAAACCAGTGCACCATCGG	+
Preference number: 6 (lower is better) Translates to: EPVRWWPLSRGL*VRQERKPVHHR Trigger: CCGATGGTGCACTGGTTTTCTTTCCTGTCTGACCAACAAGCCTCTGGAGAGTGGCCACCATCTTACAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420391.1
CDS CAA 90 bp	ATACAAAGTGAGCCTGTAAGATGGTGGCCACTCTCCAGAGGCTTGTaGGTCAGACAGGAAAGAAAACCAGTGCACCATCGGGAACGTGGA	+
Preference number: 6 (lower is better) Translates to: IQSEPVRWWPLSRGL*VRQERKPVHHRERG Trigger: TCCACGTTCCCGATGGTGCACTGGTTTTCTTTCCTGTCTGACCAACAAGCCTCTGGAGAGTGGCCACCATCTTACAGGCTCACTTTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420391.1
CDS CAA 90 bp	AGAATACAAAGTGAGCCTGTAAGATGGTGGCCACTCTCCAGAGGCTaGTTGGTCAGACAGGAAAGAAAACCAGTGCACCATCGGGAACGT	+
Preference number: 6 (lower is better) Translates to: RIQSEPVRWWPLSRG*LVRQERKPVHHRER Trigger: ACGTTCCCGATGGTGCACTGGTTTTCTTTCCTGTCTGACCAACAAGCCTCTGGAGAGTGGCCACCATCTTACAGGCTCACTTTGTATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420391.1
CDS CCA 72 bp	CTGAAAGTTTACAGAATACAAAGTGAGCCTGTAAGATaGTGGCCACTCTCCAGAGGCTTGTTGGTCAGACAG	+
Preference number: 6 (lower is better) Translates to: LKVYRIQSEPVR*WPLSRGLLVRQ Trigger: CTGTCTGACCAACAAGCCTCTGGAGAGTGGCCACCATCTTACAGGCTCACTTTGTATTCTGTAAACTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420391.1
CDS CCA 72 bp	AAAGTTTACAGAATACAAAGTGAGCCTGTAAGATGGTaGCCACTCTCCAGAGGCTTGTTGGTCAGACAGGAA	+
Preference number: 6 (lower is better) Translates to: KVYRIQSEPVRW*PLSRGLLVRQE Trigger: TTCCTGTCTGACCAACAAGCCTCTGGAGAGTGGCCACCATCTTACAGGCTCACTTTGTATTCTGTAAACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420391.1

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