RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02551 (Homo sapiens)

Ensembl gene IDs: ENSG00000254842

Ensembl transcript IDs: ENST00000533434.1, ENST00000533812.6

Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CGCCCTCCGCACCCGGGGATGCGGCGTCCCCAGCCTTGCCTTTCTTaGTGGCTAAAGCAACAGCGCCACCTTCCGGCCTCAAGGCCACCG +
Preference number: 5 (lower is better)
Translates to: RPPHPGMRRPQPCLS*WLKQQRHLPASRPP
Trigger: CGGTGGCCTTGAGGCCGGAAGGTGGCGCTGTTGCTTTAGCCATCAAGAAAGGCAAGGCTGGGGACGCCGCATCCCCGGGTGCGGAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 90 bp ACAGCGCCACCTTCCGGCCTCAAGGCCACCGGGCGTGGCCGGACTTaGGAGACCTTGGGCGCCCTCTTGTGGAATTTCAGAAGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: TAPPSGLKATGRGRT*ETLGALLWNFRSWA
Trigger: AGCCCAACTTCTGAAATTCCACAAGAGGGCGCCCAAGGTCTCCCAAGTCCGGCCACGCCCGGTGGCCTTGAGGCCGGAAGGTGGCGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 90 bp AGACCTAGGAAGCTAGCGTCCGGCGCTTGGCTTTGTTTCCCGGAGTaGGTGGCACTGTTTGGCCGCCACAGGCACAGCATCGCCCCTAGG +
Preference number: 5 (lower is better)
Translates to: RPRKLASGAWLCFPE*VALFGRHRHSIAPR
Trigger: CCTAGGGGCGATGCTGTGCCTGTGGCGGCCAAACAGTGCCACCCACTCCGGGAAACAAAGCCAAGCGCCGGACGCTAGCTTCCTAGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 90 bp GCCACCGGGCGTGGCCGGACTTGGGAGACCTTGGGCGCCCTCTTGTaGAATTTCAGAAGTTGGGCTGCGAAAATGACTCCGTTATCCCCA +
Preference number: 5 (lower is better)
Translates to: ATGRGRTWETLGALL*NFRSWAAKMTPLSP
Trigger: TGGGGATAACGGAGTCATTTTCGCAGCCCAACTTCTGAAATTCCACAAGAGGGCGCCCAAGGTCTCCCAAGTCCGGCCACGCCCGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 90 bp CCTGGAGCACGGCTTGGAGCCTCGGGCATCAGACCCTGTGTCCACTaGGAACTGTGGATGTGGAATATGCCCAGGACTGCATTCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PGARLGASGIRPCVH*ELWMWNMPRTAFSA
Trigger: GGCTGAGAATGCAGTCCTGGGCATATTCCACATCCACAGTTCTCAGTGGACACAGGGTCTGATGCCCGAGGCTCCAAGCCGTGCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 90 bp GCTGCGAAAATGACTCCGTTATCCCCAGCTGACCATGAGGCCCGCTaGGCACTTCCACCTCTGAGGTTTGAGTGGTTCAGTGGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: AAKMTPLSPADHEAR*ALPPLRFEWFSGPV
Trigger: CACAGGCCCACTGAACCACTCAAACCTCAGAGGTGGAAGTGCCCAGCGGGCCTCATGGTCAGCTGGGGATAACGGAGTCATTTTCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 90 bp AGCACTCAGGAACACACTCAGCCCCTGAATCTTCACTCAGTTCCGTaGTGTTACTGGCAATCGTTGGATATCCCTGGCTGGGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: STQEHTQPLNLHSVP*CYWQSLDIPGWGSA
Trigger: GGCTGAGCCCCAGCCAGGGATATCCAACGATTGCCAGTAACACCACGGAACTGAGTGAAGATTCAGGGGCTGAGTGTGTTCCTGAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 90 bp TCTTCACTCAGTTCCGTGGTGTTACTGGCAATCGTTGGATATCCCTaGCTGGGGCTCAGCCTCAGCTCCGGTGTCAGCTACATAAGAATC +
Preference number: 5 (lower is better)
Translates to: SSLSSVVLLAIVGYP*LGLSLSSGVSYIRI
Trigger: GATTCTTATGTAGCTGACACCGGAGCTGAGGCTGAGCCCCAGCCAGGGATATCCAACGATTGCCAGTAACACCACGGAACTGAGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 90 bp TTCCAGGTCCCCCGGTTTGAAGCACTCAGGAACACACTCAGCCCCTaGATCTTCACTCAGTTCCGTGGTGTTACTGGCAATCGTTGGATA +
Preference number: 5 (lower is better)
Translates to: FQVPRFEALRNTLSP*IFTQFRGVTGNRWI
Trigger: TATCCAACGATTGCCAGTAACACCACGGAACTGAGTGAAGATTCAGGGGCTGAGTGTGTTCCTGAGTGCTTCAAACCGGGGGACCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 90 bp CTCAGCCTCAGCTCCGGTGTCAGCTACATAAGAATCTCAGCATCTTaGGAACGTGAGCTCAACTTGAAATACACTTCCTGGAGCACGGCT +
Preference number: 5 (lower is better)
Translates to: LSLSSGVSYIRISAS*ERELNLKYTSWSTA
Trigger: AGCCGTGCTCCAGGAAGTGTATTTCAAGTTGAGCTCACGTTCCCAAGATGCTGAGATTCTTATGTAGCTGACACCGGAGCTGAGGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 90 bp TGCCAGATATTGGGTGTCCCTGAAGATGAAGCCAGTTGTGTCTATTaGCCTCTTCTCCAAATAGCCAAAGCAAGTGTGCTCAGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: CQILGVPEDEASCVY*PLLQIAKASVLSAL
Trigger: CAGGGCACTGAGCACACTTGCTTTGGCTATTTGGAGAAGAGGCCAATAGACACAACTGGCTTCATCTTCAGGGACACCCAATATCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533434.1
ENST00000533812.6
CDS TCA 90 bp CTACCTTGGTGTAGAAGATCAGAGGCATATGAGGTGAGAAACAGGTaGCATGTCACGCTCCCTGGAGACAAAATGTCCAGAAAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LPWCRRSEAYEVRNR*HVTLPGDKMSRKLL
Trigger: GAGGAGCTTTCTGGACATTTTGTCTCCAGGGAGCGTGACATGTCACCTGTTTCTCACCTCATATGCCTCTGATCTTCTACACCAAGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 90 bp AACTTGTTCTTGGCTTCTGCTACTAGAGAATTTGTGAATTTCCGTTaGACACGTGGAAGACCTAGGAAGCTAGCGTCCGGCGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: NLFLASATREFVNFR*TRGRPRKLASGAWL
Trigger: AAGCCAAGCGCCGGACGCTAGCTTCCTAGGTCTTCCACGTGTTCAACGGAAATTCACAAATTCTCTAGTAGCAGAAGCCAAGAACAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 90 bp AGCCTTTATAGCTACCTTGGTGTAGAAGATCAGAGGCATATGAGGTaGGAAACAGGTGACATGTCACGCTCCCTGGAGACAAAATGTCCA +
Preference number: 5 (lower is better)
Translates to: SLYSYLGVEDQRHMR*ETGDMSRSLETKCP
Trigger: TGGACATTTTGTCTCCAGGGAGCGTGACATGTCACCTGTTTCTCACCTCATATGCCTCTGATCTTCTACACCAAGGTAGCTATAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp AACAGCGCCACCTTCCGGCCTCAAGGCCACCGGGCGTaGCCGGACTTGGGAGACCTTGGGCGCCCTCTTGTG +
Preference number: 6 (lower is better)
Translates to: NSATFRPQGHRA*PDLGDLGRPLV
Trigger: CACAAGAGGGCGCCCAAGGTCTCCCAAGTCCGGCCACGCCCGGTGGCCTTGAGGCCGGAAGGTGGCGCTGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp CCTTCCGGCCTCAAGGCCACCGGGCGTGGCCGGACTTaGGAGACCTTGGGCGCCCTCTTGTGGAATTTCAGA +
Preference number: 6 (lower is better)
Translates to: PSGLKATGRGRT*ETLGALLWNFR
Trigger: TCTGAAATTCCACAAGAGGGCGCCCAAGGTCTCCCAAGTCCGGCCACGCCCGGTGGCCTTGAGGCCGGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CAA 72 bp ACCTTCCGGCCTCAAGGCCACCGGGCGTGGCCGGACTaGGGAGACCTTGGGCGCCCTCTTGTGGAATTTCAG +
Preference number: 6 (lower is better)
Translates to: TFRPQGHRAWPD*GDLGRPLVEFQ
Trigger: CTGAAATTCCACAAGAGGGCGCCCAAGGTCTCCCAAGTCCGGCCACGCCCGGTGGCCTTGAGGCCGGAAGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CAA 72 bp TCGCCCTCCGCACCCGGGGATGCGGCGTCCCCAGCCTaGCCTTTCTTGATGGCTAAAGCAACAGCGCCACCT +
Preference number: 6 (lower is better)
Translates to: SPSAPGDAASPA*PFLMAKATAPP
Trigger: AGGTGGCGCTGTTGCTTTAGCCATCAAGAAAGGCAAGGCTGGGGACGCCGCATCCCCGGGTGCGGAGGGCGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CAA 90 bp AACAGCGCCACCTTCCGGCCTCAAGGCCACCGGGCGTGGCCGGACTaGGGAGACCTTGGGCGCCCTCTTGTGGAATTTCAGAAGTTGGGC +
Preference number: 6 (lower is better)
Translates to: NSATFRPQGHRAWPD*GDLGRPLVEFQKLG
Trigger: GCCCAACTTCTGAAATTCCACAAGAGGGCGCCCAAGGTCTCCCAAGTCCGGCCACGCCCGGTGGCCTTGAGGCCGGAAGGTGGCGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 72 bp CACCCGGGGATGCGGCGTCCCCAGCCTTGCCTTTCTTaGTGGCTAAAGCAACAGCGCCACCTTCCGGCCTCA +
Preference number: 6 (lower is better)
Translates to: HPGMRRPQPCLS*WLKQQRHLPAS
Trigger: TGAGGCCGGAAGGTGGCGCTGTTGCTTTAGCCATCAAGAAAGGCAAGGCTGGGGACGCCGCATCCCCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CAA 72 bp GCGCTTGGCTTTGTTTCCCGGAGTGGGTGGCACTGTTaGGCCGCCACAGGCACAGCATCGCCCCTAGGCATC +
Preference number: 6 (lower is better)
Translates to: ALGFVSRSGWHC*AATGTASPLGI
Trigger: GATGCCTAGGGGCGATGCTGTGCCTGTGGCGGCCAAACAGTGCCACCCACTCCGGGAAACAAAGCCAAGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CAA 90 bp CCTTCCGGCCTCAAGGCCACCGGGCGTGGCCGGACTTGGGAGACCTaGGGCGCCCTCTTGTGGAATTTCAGAAGTTGGGCTGCGAAAATG +
Preference number: 6 (lower is better)
Translates to: PSGLKATGRGRTWET*GALLWNFRSWAAKM
Trigger: CATTTTCGCAGCCCAACTTCTGAAATTCCACAAGAGGGCGCCCAAGGTCTCCCAAGTCCGGCCACGCCCGGTGGCCTTGAGGCCGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp AAGCTAGCGTCCGGCGCTTGGCTTTGTTTCCCGGAGTaGGTGGCACTGTTTGGCCGCCACAGGCACAGCATC +
Preference number: 6 (lower is better)
Translates to: KLASGAWLCFPE*VALFGRHRHSI
Trigger: GATGCTGTGCCTGTGGCGGCCAAACAGTGCCACCCACTCCGGGAAACAAAGCCAAGCGCCGGACGCTAGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 72 bp CAGCTGACCATGAGGCCCGCTGGGCACTTCCACCTCTaGGGTTTGAGTGGTTCAGTGGGCCTGTGCAGGGAA +
Preference number: 6 (lower is better)
Translates to: QLTMRPAGHFHL*GLSGSVGLCRE
Trigger: TTCCCTGCACAGGCCCACTGAACCACTCAAACCTCAGAGGTGGAAGTGCCCAGCGGGCCTCATGGTCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp ACACGTGGAAGACCTAGGAAGCTAGCGTCCGGCGCTTaGCTTTGTTTCCCGGAGTGGGTGGCACTGTTTGGC +
Preference number: 6 (lower is better)
Translates to: TRGRPRKLASGA*LCFPEWVALFG
Trigger: GCCAAACAGTGCCACCCACTCCGGGAAACAAAGCCAAGCGCCGGACGCTAGCTTCCTAGGTCTTCCACGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp CGTGGCCGGACTTGGGAGACCTTGGGCGCCCTCTTGTaGAATTTCAGAAGTTGGGCTGCGAAAATGACTCCG +
Preference number: 6 (lower is better)
Translates to: RGRTWETLGALL*NFRSWAAKMTP
Trigger: CGGAGTCATTTTCGCAGCCCAACTTCTGAAATTCCACAAGAGGGCGCCCAAGGTCTCCCAAGTCCGGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp CAGCCCCTGAATCTTCACTCAGTTCCGTGGTGTTACTaGCAATCGTTGGATATCCCTGGCTGGGGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: QPLNLHSVPWCY*QSLDIPGWGSA
Trigger: GGCTGAGCCCCAGCCAGGGATATCCAACGATTGCCAGTAACACCACGGAACTGAGTGAAGATTCAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp ATGACTCCGTTATCCCCAGCTGACCATGAGGCCCGCTaGGCACTTCCACCTCTGAGGTTTGAGTGGTTCAGT +
Preference number: 6 (lower is better)
Translates to: MTPLSPADHEAR*ALPPLRFEWFS
Trigger: ACTGAACCACTCAAACCTCAGAGGTGGAAGTGCCCAGCGGGCCTCATGGTCAGCTGGGGATAACGGAGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CAA 90 bp CTGAAGTCACTACTAACAAGGCCATTTAGGAAGAGCAGGCTGGAGTaGACAGCCTTTCCCCAGGAGTCCTCTGGTTTCCAGGTCCCCCGG +
Preference number: 6 (lower is better)
Translates to: LKSLLTRPFRKSRLE*TAFPQESSGFQVPR
Trigger: CCGGGGGACCTGGAAACCAGAGGACTCCTGGGGAAAGGCTGTCAACTCCAGCCTGCTCTTCCTAAATGGCCTTGTTAGTAGTGACTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp GAGCTCAACTTGAAATACACTTCCTGGAGCACGGCTTaGAGCCTCGGGCATCAGACCCTGTGTCCACTGAGA +
Preference number: 6 (lower is better)
Translates to: ELNLKYTSWSTA*SLGHQTLCPLR
Trigger: TCTCAGTGGACACAGGGTCTGATGCCCGAGGCTCCAAGCCGTGCTCCAGGAAGTGTATTTCAAGTTGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 72 bp CCCTCTTGTGGAATTTCAGAAGTTGGGCTGCGAAAATaGCTCCGTTATCCCCAGCTGACCATGAGGCCCGCT +
Preference number: 6 (lower is better)
Translates to: PSCGISEVGLRK*LRYPQLTMRPA
Trigger: AGCGGGCCTCATGGTCAGCTGGGGATAACGGAGTCATTTTCGCAGCCCAACTTCTGAAATTCCACAAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 72 bp CCCCGGTTTGAAGCACTCAGGAACACACTCAGCCCCTaGATCTTCACTCAGTTCCGTGGTGTTACTGGCAAT +
Preference number: 6 (lower is better)
Translates to: PRFEALRNTLSP*IFTQFRGVTGN
Trigger: ATTGCCAGTAACACCACGGAACTGAGTGAAGATTCAGGGGCTGAGTGTGTTCCTGAGTGCTTCAAACCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp GAACACACTCAGCCCCTGAATCTTCACTCAGTTCCGTaGTGTTACTGGCAATCGTTGGATATCCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: EHTQPLNLHSVP*CYWQSLDIPGW
Trigger: CCAGCCAGGGATATCCAACGATTGCCAGTAACACCACGGAACTGAGTGAAGATTCAGGGGCTGAGTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS GCA 72 bp AGTTCTTTCAATAAAGACTCCGCTGGGGCTGAGGGCTaGCAGATATTGGGTGTCCCTGAAGATGAAGCCAGT +
Preference number: 6 (lower is better)
Translates to: SSFNKDSAGAEG*QILGVPEDEAS
Trigger: ACTGGCTTCATCTTCAGGGACACCCAATATCTGGCAGCCCTCAGCCCCAGCGGAGTCTTTATTGAAAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533434.1
ENST00000533812.6
CDS CAA 72 bp AATAAAGACTCCGCTGGGGCTGAGGGCTGCCAGATATaGGGTGTCCCTGAAGATGAAGCCAGTTGTGTCTAT +
Preference number: 6 (lower is better)
Translates to: NKDSAGAEGCQI*GVPEDEASCVY
Trigger: ATAGACACAACTGGCTTCATCTTCAGGGACACCCAATATCTGGCAGCCCTCAGCCCCAGCGGAGTCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533434.1
ENST00000533812.6
CDS CAA 90 bp AGTTCTTTCAATAAAGACTCCGCTGGGGCTGAGGGCTGCCAGATATaGGGTGTCCCTGAAGATGAAGCCAGTTGTGTCTATTGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: SSFNKDSAGAEGCQI*GVPEDEASCVYWPL
Trigger: AAGAGGCCAATAGACACAACTGGCTTCATCTTCAGGGACACCCAATATCTGGCAGCCCTCAGCCCCAGCGGAGTCTTTATTGAAAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533434.1
ENST00000533812.6
CDS TCA 72 bp TTGGCTTCTGCTACTAGAGAATTTGTGAATTTCCGTTaGACACGTGGAAGACCTAGGAAGCTAGCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: LASATREFVNFR*TRGRPRKLASG
Trigger: GCCGGACGCTAGCTTCCTAGGTCTTCCACGTGTTCAACGGAAATTCACAAATTCTCTAGTAGCAGAAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp TTGGGTGTCCCTGAAGATGAAGCCAGTTGTGTCTATTaGCCTCTTCTCCAAATAGCCAAAGCAAGTGTGCTC +
Preference number: 6 (lower is better)
Translates to: LGVPEDEASCVY*PLLQIAKASVL
Trigger: GAGCACACTTGCTTTGGCTATTTGGAGAAGAGGCCAATAGACACAACTGGCTTCATCTTCAGGGACACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533434.1
ENST00000533812.6
CDS TCA 72 bp TGTCAGCTACATAAGAATCTCAGCATCTTGGGAACGTaGGCTCAACTTGAAATACACTTCCTGGAGCACGGC +
Preference number: 6 (lower is better)
Translates to: CQLHKNLSILGT*AQLEIHFLEHG
Trigger: GCCGTGCTCCAGGAAGTGTATTTCAAGTTGAGCTCACGTTCCCAAGATGCTGAGATTCTTATGTAGCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 72 bp TGTAGAAGATCAGAGGCATATGAGGTGAGAAACAGGTaGCATGTCACGCTCCCTGGAGACAAAATGTCCAGA +
Preference number: 6 (lower is better)
Translates to: CRRSEAYEVRNR*HVTLPGDKMSR
Trigger: TCTGGACATTTTGTCTCCAGGGAGCGTGACATGTCACCTGTTTCTCACCTCATATGCCTCTGATCTTCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS CCA 72 bp AGCTCCGGTGTCAGCTACATAAGAATCTCAGCATCTTaGGAACGTGAGCTCAACTTGAAATACACTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSGVSYIRISAS*ERELNLKYTSW
Trigger: CCAGGAAGTGTATTTCAAGTTGAGCTCACGTTCCCAAGATGCTGAGATTCTTATGTAGCTGACACCGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 72 bp AGAACTTGTTCTTGGCTTCTGCTACTAGAGAATTTGTaGATTTCCGTTGAACACGTGGAAGACCTAGGAAGC +
Preference number: 6 (lower is better)
Translates to: RTCSWLLLLENL*ISVEHVEDLGS
Trigger: GCTTCCTAGGTCTTCCACGTGTTCAACGGAAATTCACAAATTCTCTAGTAGCAGAAGCCAAGAACAAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533812.6
CDS TCA 72 bp AAACTCAGTTCTAGTTATGGTTTTTCCATTAATAGTTaGGGCTCCCAAGCTTCTCTGGGCTTCAATTTTATC +
Preference number: 6 (lower is better)
Translates to: KLSSSYGFSINS*GSQASLGFNFI
Trigger: GATAAAATTGAAGCCCAGAGAAGCTTGGGAGCCTCAACTATTAATGGAAAAACCATAACTAGAACTGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533434.1
ENST00000533812.6