Pregenerated sensors for LINC02548 (Homo sapiens)
Ensembl gene IDs: ENSG00000255411Ensembl transcript IDs: ENST00000531749.1, ENST00000648524.1, ENST00000655374.1, ENST00000655777.1, ENST00000657797.1, ENST00000659648.1, ENST00000664710.1, ENST00000668428.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTTGAATTGGGGTTTATCACCAGGGCCTGCTCCATCTTGTGTGCCTaGCTGTTCACCGCGGTCAAATCCGTCTCATTATCTTCTGCACCC | + |
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Preference number: 5 (lower is better) Translates to: LELGFITRACSILCA*LFTAVKSVSLSSAP Trigger: GGGTGCAGAAGATAATGAGACGGATTTGACCGCGGTGAACAGGCAGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS GCA 90 bp | TCCTCATACTTCCTCTCACTTGAATTGGGGTTTATCACCAGGGCCTaGTCCATCTTGTGTGCCTGCCTGTTCACCGCGGTCAAATCCGTC | + |
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Preference number: 5 (lower is better) Translates to: SSYFLSLELGFITRA*SILCACLFTAVKSV Trigger: GACGGATTTGACCGCGGTGAACAGGCAGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAGTGAGAGGAAGTATGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS TCA 90 bp | CAAAACAGGTCTCCAACACCTTCACAGTGTTCAGGGTCTTTGCCCTaGACCCCAGCGCTTGACCTGCTTCTGATTCTCCAGGCTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: QNRSPTPSQCSGSLP*TPALDLLLILQASE Trigger: TTCAGAAGCCTGGAGAATCAGAAGCAGGTCAAGCGCTGGGGTTCAGGGCAAAGACCCTGAACACTGTGAAGGTGTTGGAGACCTGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000531749.1 ENST00000648524.1 ENST00000655374.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS TCA 90 bp | TTGGCCCTTCGTAGGCACTTTAATCTCTCAGGTCTGCACTCACATTaGGCCGCAGTGCCACCTCAAAACAGGTCTCCAACACCTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: LALRRHFNLSGLHSH*AAVPPQNRSPTPSQ Trigger: CTGTGAAGGTGTTGGAGACCTGTTTTGAGGTGGCACTGCGGCTCAATGTGAGTGCAGACCTGAGAGATTAAAGTGCCTACGAAGGGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000531749.1 ENST00000648524.1 ENST00000655374.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS GCA 90 bp | GGGACAGGTATTTGGCCCTTCGTAGGCACTTTAATCTCTCAGGTCTaGACTCACATTGAGCCGCAGTGCCACCTCAAAACAGGTCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: GTGIWPFVGTLISQV*THIEPQCHLKTGLQ Trigger: TTGGAGACCTGTTTTGAGGTGGCACTGCGGCTCAATGTGAGTGCAGACCTGAGAGATTAAAGTGCCTACGAAGGGCCAAATACCTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000531749.1 ENST00000648524.1 ENST00000655374.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS TCA 90 bp | AGTGTTCAGGGTCTTTGCCCTGAACCCCAGCGCTTGACCTGCTTCTaGTTCTCCAGGCTTCTGAACTCGCTGTTTTCCTTCGTGTTCATA | + |
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Preference number: 5 (lower is better) Translates to: SVQGLCPEPQRLTCF*FSRLLNSLFSFVFI Trigger: TATGAACACGAAGGAAAACAGCGAGTTCAGAAGCCTGGAGAATCAGAAGCAGGTCAAGCGCTGGGGTTCAGGGCAAAGACCCTGAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000531749.1 ENST00000648524.1 ENST00000655374.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS GCA 90 bp | GTAGGCACTTTAATCTCTCAGGTCTGCACTCACATTGAGCCGCAGTaGCACCTCAAAACAGGTCTCCAACACCTTCACAGTGTTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: VGTLISQVCTHIEPQ*HLKTGLQHLHSVQG Trigger: ACCCTGAACACTGTGAAGGTGTTGGAGACCTGTTTTGAGGTGGCACTGCGGCTCAATGTGAGTGCAGACCTGAGAGATTAAAGTGCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000531749.1 ENST00000648524.1 ENST00000655374.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS TCA 90 bp | ACTGGACTCCATCTTCCAATCTGGTTCCTCATACTTCCTCTCACTTaGATTGGGGTTTATCACCAGGGCCTGCTCCATCTTGTGTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: TGLHLPIWFLILPLT*IGVYHQGLLHLVCL Trigger: CAGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAGTGAGAGGAAGTATGAGGAACCAGATTGGAAGATGGAGTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS CCA 90 bp | ACTCCATCTTCCAATCTGGTTCCTCATACTTCCTCTCACTTGAATTaGGGTTTATCACCAGGGCCTGCTCCATCTTGTGTGCCTGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: TPSSNLVPHTSSHLN*GLSPGPAPSCVPAC Trigger: ACAGGCAGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAGTGAGAGGAAGTATGAGGAACCAGATTGGAAGATGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS CCA 90 bp | ATCCCTCTGGTTTATCAAGCTGCCTGGACCATGATCTCTGGGCACTaGACTCCATCTTCCAATCTGGTTCCTCATACTTCCTCTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPLVYQAAWTMISGH*TPSSNLVPHTSSHL Trigger: CAAGTGAGAGGAAGTATGAGGAACCAGATTGGAAGATGGAGTCCAGTGCCCAGAGATCATGGTCCAGGCAGCTTGATAAACCAGAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659648.1 |
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| CDS CCA 90 bp | CAAACTTTGATCTTCAATCCTGCCTGGACCATGATCTCTGGGCACTaGACTCCATCTTCCAATCTGGTTCCTCATACTTCCTCTCACTTG | + |
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Preference number: 5 (lower is better) Translates to: QTLIFNPAWTMISGH*TPSSNLVPHTSSHL Trigger: CAAGTGAGAGGAAGTATGAGGAACCAGATTGGAAGATGGAGTCCAGTGCCCAGAGATCATGGTCCAGGCAGGATTGAAGATCAAAGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664710.1 |
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| CDS TCA 90 bp | GAGTTAGAAACCTGCCTCAAACTTGTTTGTTCAGCAAGCATTTGCTaGGCCCTTGCTGTACATGTGGCCCATATTCCATTAGGAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: ELETCLKLVCSASIC*ALAVHVAHIPLGEA Trigger: TGCCTCTCCTAATGGAATATGGGCCACATGTACAGCAAGGGCTCAGCAAATGCTTGCTGAACAAACAAGTTTGAGGCAGGTTTCTAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000648524.1 ENST00000655374.1 ENST00000655777.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS TCA 90 bp | ATGTTTCTGCTCTTGGTCTTTCTATTTCCAACACAAGCATCAAAGTaGTCCTGTGTAGACACAAGTGTAGGCAAGACCAGGGAAGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: MFLLLVFLFPTQASK*SCVDTSVGKTREEP Trigger: GGGCTCTTCCCTGGTCTTGCCTACACTTGTGTCTACACAGGATCACTTTGATGCTTGTGTTGGAAATAGAAAGACCAAGAGCAGAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668428.1 |
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| CDS GCA 90 bp | CCTTCAGTTTCTCTCTCAGACTATCCCTCTGGTTTATCAAGCATGTaGCCAGGAGAGGGATGCAGAAATTTTGTGAACAGGCTTCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: PSVSLSDYPSGLSSM*PGEGCRNFVNRLLF Trigger: GAAAAGAAGCCTGTTCACAAAATTTCTGCATCCCTCTCCTGGGCACATGCTTGATAAACCAGAGGGATAGTCTGAGAGAGAAACTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648524.1 |
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| CDS TCA 90 bp | GTAATGGGATGGCTGGGTCAAATGGTATTTCTAGCTCTAGATCCTTaGGGAATCACCACACTGTCTTCCACAATGGTTGAACTAGTTTAC | + |
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Preference number: 5 (lower is better) Translates to: VMGWLGQMVFLALDP*GITTLSSTMVELVY Trigger: GTAAACTAGTTCAACCATTGTGGAAGACAGTGTGGTGATTCCTCAAGGATCTAGAGCTAGAAATACCATTTGACCCAGCCATCCCATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655777.1 |
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| CDS CAA 72 bp | CTTGAATTGGGGTTTATCACCAGGGCCTGCTCCATCTaGTGTGCCTGCCTGTTCACCGCGGTCAAATCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LELGFITRACSI*CACLFTAVKSV Trigger: GACGGATTTGACCGCGGTGAACAGGCAGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS TCA 72 bp | GGTCTTTGCCCTGAACCCCAGCGCTTGACCTGCTTCTaGTTCTCCAGGCTTCTGAACTCGCTGTTTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GLCPEPQRLTCF*FSRLLNSLFSF Trigger: GAAGGAAAACAGCGAGTTCAGAAGCCTGGAGAATCAGAAGCAGGTCAAGCGCTGGGGTTCAGGGCAAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000531749.1 ENST00000648524.1 ENST00000655374.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS TCA 72 bp | TCTCCAACACCTTCACAGTGTTCAGGGTCTTTGCCCTaGACCCCAGCGCTTGACCTGCTTCTGATTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SPTPSQCSGSLP*TPALDLLLILQ Trigger: CTGGAGAATCAGAAGCAGGTCAAGCGCTGGGGTTCAGGGCAAAGACCCTGAACACTGTGAAGGTGTTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000531749.1 ENST00000648524.1 ENST00000655374.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS GCA 72 bp | GGGTTTATCACCAGGGCCTGCTCCATCTTGTGTGCCTaGCTGTTCACCGCGGTCAAATCCGTCTCATTATCT | + |
|
Preference number: 6 (lower is better) Translates to: GFITRACSILCA*LFTAVKSVSLS Trigger: AGATAATGAGACGGATTTGACCGCGGTGAACAGGCAGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS GCA 72 bp | ATTGGGGTTTATCACCAGGGCCTGCTCCATCTTGTGTaGCTGCCTGTTCACCGCGGTCAAATCCGTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: IGVYHQGLLHLV*LPVHRGQIRLI Trigger: AATGAGACGGATTTGACCGCGGTGAACAGGCAGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS CCA 72 bp | CCCTCTGGTTTATCAAGCTGCCTGGACCATGATCTCTaGGCACTGGACTCCATCTTCCAATCTGGTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSGLSSCLDHDL*ALDSIFQSGSS Trigger: TGAGGAACCAGATTGGAAGATGGAGTCCAGTGCCCAGAGATCATGGTCCAGGCAGCTTGATAAACCAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659648.1 |
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| CDS CAA 90 bp | TTCCTCTCACTTGAATTGGGGTTTATCACCAGGGCCTGCTCCATCTaGTGTGCCTGCCTGTTCACCGCGGTCAAATCCGTCTCATTATCT | + |
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Preference number: 6 (lower is better) Translates to: FLSLELGFITRACSI*CACLFTAVKSVSLS Trigger: AGATAATGAGACGGATTTGACCGCGGTGAACAGGCAGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAGTGAGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS CAA 90 bp | GACTCCATCTTCCAATCTGGTTCCTCATACTTCCTCTCACTTGAATaGGGGTTTATCACCAGGGCCTGCTCCATCTTGTGTGCCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: DSIFQSGSSYFLSLE*GFITRACSILCACL Trigger: CAGGCAGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAGTGAGAGGAAGTATGAGGAACCAGATTGGAAGATGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS CAA 90 bp | CACTGGACTCCATCTTCCAATCTGGTTCCTCATACTTCCTCTCACTaGAATTGGGGTTTATCACCAGGGCCTGCTCCATCTTGTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: HWTPSSNLVPHTSSH*NWGLSPGPAPSCVP Trigger: AGGCACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAGTGAGAGGAAGTATGAGGAACCAGATTGGAAGATGGAGTCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS TCA 72 bp | CAAGCATGTGCCCAGGAGAGGGATGCAGAAATTTTGTaGACAGGCTTCTTTTCCTGCTCCTTTGCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QACAQERDAEIL*TGFFSCSFASL Trigger: CAGAGAGGCAAAGGAGCAGGAAAAGAAGCCTGTTCACAAAATTTCTGCATCCCTCTCCTGGGCACATGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648524.1 |
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| CDS GCA 72 bp | ATTTGGCCCTTCGTAGGCACTTTAATCTCTCAGGTCTaGACTCACATTGAGCCGCAGTGCCACCTCAAAACA | + |
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Preference number: 6 (lower is better) Translates to: IWPFVGTLISQV*THIEPQCHLKT Trigger: TGTTTTGAGGTGGCACTGCGGCTCAATGTGAGTGCAGACCTGAGAGATTAAAGTGCCTACGAAGGGCCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000531749.1 ENST00000648524.1 ENST00000655374.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS CCA 72 bp | TCCAATCTGGTTCCTCATACTTCCTCTCACTTGAATTaGGGTTTATCACCAGGGCCTGCTCCATCTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SNLVPHTSSHLN*GLSPGPAPSCV Trigger: CACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAGTGAGAGGAAGTATGAGGAACCAGATTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS CCA 72 bp | AACTTTGATCTTCAATCCTGCCTGGACCATGATCTCTaGGCACTGGACTCCATCTTCCAATCTGGTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: NFDLQSCLDHDL*ALDSIFQSGSS Trigger: TGAGGAACCAGATTGGAAGATGGAGTCCAGTGCCCAGAGATCATGGTCCAGGCAGGATTGAAGATCAAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664710.1 |
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| CDS CAA 72 bp | CCATCTTCCAATCTGGTTCCTCATACTTCCTCTCACTaGAATTGGGGTTTATCACCAGGGCCTGCTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: PSSNLVPHTSSH*NWGLSPGPAPS Trigger: AGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAGTGAGAGGAAGTATGAGGAACCAGATTGGAAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS CAA 72 bp | TGTACCAGGATGGGGCCTAGAAGTCAACTTCAAACTTaGATCTTCAATCCTGTGGTGAGAGGGAGGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: CTRMGPRSQLQT*IFNPVVRGRWE Trigger: TTCCCACCTCCCTCTCACCACAGGATTGAAGATCAAAGTTTGAAGTTGACTTCTAGGCCCCATCCTGGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648524.1 |
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| CDS CAA 72 bp | TGTACCAGGATGGGGCCTAGAAGTCAACTTCAAACTTaGATCTTCAATCCTGCCTGGACCATGATCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CTRMGPRSQLQT*IFNPAWTMISG Trigger: CCCAGAGATCATGGTCCAGGCAGGATTGAAGATCAAAGTTTGAAGTTGACTTCTAGGCCCCATCCTGGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664710.1 |
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| CDS TCA 72 bp | TCCTTGAGGAATCACCACACTGTCTTCCACAATGGTTaGACTAGTTTACAGTCCCACCAGCGGTGTAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SLRNHHTVFHNG*TSLQSHQRCRS Trigger: ACTTCTACACCGCTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGACAGTGTGGTGATTCCTCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655777.1 |
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| CDS GCA 72 bp | TCTCTCTCAGACTATCCCTCTGGTTTATCAAGCATGTaGCCAGGAGAGGGATGCAGAAATTTTGTGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: SLSDYPSGLSSM*PGEGCRNFVNR Trigger: CCTGTTCACAAAATTTCTGCATCCCTCTCCTGGGCACATGCTTGATAAACCAGAGGGATAGTCTGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648524.1 |
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| CDS CAA 72 bp | TTCCAATCTGGTTCCTCATACTTCCTCTCACTTGAATaGGGGTTTATCACCAGGGCCTGCTCCATCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: FQSGSSYFLSLE*GFITRACSILC Trigger: ACACAAGATGGAGCAGGCCCTGGTGATAAACCCCAATTCAAGTGAGAGGAAGTATGAGGAACCAGATTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000648524.1 ENST00000659648.1 ENST00000664710.1 |
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| CDS TCA 72 bp | ACCTGCCTCAAACTTGTTTGTTCAGCAAGCATTTGCTaGGCCCTTGCTGTACATGTGGCCCATATTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: TCLKLVCSASIC*ALAVHVAHIPL Trigger: TAATGGAATATGGGCCACATGTACAGCAAGGGCTCAGCAAATGCTTGCTGAACAAACAAGTTTGAGGCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000648524.1 ENST00000655374.1 ENST00000655777.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS TCA 72 bp | TGGCTGGGTCAAATGGTATTTCTAGCTCTAGATCCTTaGGGAATCACCACACTGTCTTCCACAATGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: WLGQMVFLALDP*GITTLSSTMVE Trigger: TTCAACCATTGTGGAAGACAGTGTGGTGATTCCTCAAGGATCTAGAGCTAGAAATACCATTTGACCCAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655777.1 |
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| CDS TCA 72 bp | CTCTTGGTCTTTCTATTTCCAACACAAGCATCAAAGTaGTCCTGTGTAGACACAAGTGTAGGCAAGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLVFLFPTQASK*SCVDTSVGKTR Trigger: CCTGGTCTTGCCTACACTTGTGTCTACACAGGATCACTTTGATGCTTGTGTTGGAAATAGAAAGACCAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668428.1 |
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| CDS GCA 72 bp | CATGTGTACAACGTGCAGGTTACATATGTATACATGTaGCATGTTGGTGTGCTGCACCCATTAACTCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: HVYNVQVTYVYM*HVGVLHPLTRH Trigger: ATGACGAGTTAATGGGTGCAGCACACCAACATGGCACATGTATACATATGTAACCTGCACGTTGTACACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655777.1 |
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| CDS CCA 72 bp | TTCTTAATCCAGTCTATCATTGACGGACACTTGCGTTaGTTCCAAGTCTTTGCTATTGTGAATAGTGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: FLIQSIIDGHLR*FQVFAIVNSAA Trigger: TGCGGCACTATTCACAATAGCAAAGACTTGGAACCAACGCAAGTGTCCGTCAATGATAGACTGGATTAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655777.1 |
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| CDS TCA 72 bp | GTATATGTGCCACATTTTCTTAATCCAGTCTATCATTaGCGGACACTTGCGTTGGTTCCAAGTCTTTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: VYVPHFLNPVYH*RTLALVPSLCY Trigger: ATAGCAAAGACTTGGAACCAACGCAAGTGTCCGTCAATGATAGACTGGATTAAGAAAATGTGGCACATATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655777.1 |
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| CDS CAA 72 bp | TGGAATTTAAGAGAACCTGAAAGAGCCACAGCAATGTaGATCTCCTTTGACCCAGTCATTCCATTACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: WNLREPERATAM*ISFDPVIPLLK Trigger: TTTCAGTAATGGAATGACTGGGTCAAAGGAGATCAACATTGCTGTGGCTCTTTCAGGTTCTCTTAAATTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000531749.1 ENST00000648524.1 ENST00000655374.1 ENST00000655777.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS CAA 72 bp | TGCATGTGTCTTTACAGTAGCATGATTTATAATCCTTaGGGTATATACCCAGTAATGGGATGGCTGGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: CMCLYSSMIYNP*GIYPVMGWLGQ Trigger: TTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTACTGTAAAGACACATGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655777.1 |
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| CDS CAA 90 bp | CCTGAAGACATTTGCTATGAGTGCAGAAAATCCACAAGGGTCAATTaGCTAATTGAGATTATCTGTCAGTCTTTAGCATTGGAGAATAGC | + |
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Preference number: 6 (lower is better) Translates to: PEDICYECRKSTRVN*LIEIICQSLALENS Trigger: GCTATTCTCCAATGCTAAAGACTGACAGATAATCTCAATTAGCAAATTGACCCTTGTGGATTTTCTGCACTCATAGCAAATGTCTTCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000648524.1 ENST00000655374.1 ENST00000655777.1 ENST00000657797.1 ENST00000659648.1 ENST00000664710.1 ENST00000668428.1 |
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| CDS CCA 72 bp | ATTTATAATCCTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAATGGTATTTCTAGCTCTAGATCCT | + |
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Preference number: 6 (lower is better) Translates to: IYNPLGIYPVMG*LGQMVFLALDP Trigger: AGGATCTAGAGCTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655777.1 |
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| CDS CAA 90 bp | ACATACATGTGCATGTGTCTTTACAGTAGCATGATTTATAATCCTTaGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTT | + |
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Preference number: 6 (lower is better) Translates to: TYMCMCLYSSMIYNP*GIYPVMGWLGQMVF Trigger: AAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTACTGTAAAGACACATGCACATGTATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655777.1 |
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