Pregenerated sensors for LINC02547 (Homo sapiens)
Ensembl gene IDs: ENSG00000254486Ensembl transcript IDs: ENST00000531559.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCGGAAGTAATGCTATGCCAGTTGCCAGGCCCAAGACTAGAGACTaGCAGCTTCTGCCTCCTGTTTCCAGAGCCAGGCCCCTGGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GGSNAMPVARPKTRD*QLLPPVSRARPLGL Trigger: GAGGCCCAGGGGCCTGGCTCTGGAAACAGGAGGCAGAAGCTGCCAGTCTCTAGTCTTGGGCCTGGCAACTGGCATAGCATTACTTCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS GCA 90 bp | GGGTGCCAGCATGGTTCTGGTGTGGGCCCTCTATGGCTTGCAGACTaGCAACTTCTTATTGGAAAGAAAGCACAGGAGCTCTCTGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: GCQHGSGVGPLWLAD*QLLIGKKAQELSGV Trigger: CACCCCAGAGAGCTCCTGTGCTTTCTTTCCAATAAGAAGTTGGCAGTCTGCAAGCCATAGAGGGCCCACACCAGAACCATGCTGGCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS GCA 90 bp | AAGATCAGGGTGCCAGCATGGTTCTGGTGTGGGCCCTCTATGGCTTaGAGACTGCCAACTTCTTATTGGAAAGAAAGCACAGGAGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: KIRVPAWFWCGPSMA*RLPTSYWKESTGAL Trigger: GAGAGCTCCTGTGCTTTCTTTCCAATAAGAAGTTGGCAGTCTGCAAGCCATAGAGGGCCCACACCAGAACCATGCTGGCACCCTGATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 90 bp | CTGTATTTCCTTCTTCTAGGACCCTTCGCCCAATCAGACGGCAGCTaGACTGAGCTGCTGCCATCACCTCAGGAAAGCCATGATGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: LYFLLLGPFAQSDGS*TELLPSPQESHDVR Trigger: TCTTACATCATGGCTTTCCTGAGGTGATGGCAGCAGCTCAGTCCAGCTGCCGTCTGATTGGGCGAAGGGTCCTAGAAGAAGGAAATACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 90 bp | GGCAGCTCTGCACAAGGTCCTCTAGGAGCAAAACTCAGGAAGCTCTaGATTCAGATGCCACTACCAAAGAACAGTCCAGGTGCTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GSSAQGPLGAKLRKL*IQMPLPKNSPGASP Trigger: TGGAGAAGCACCTGGACTGTTCTTTGGTAGTGGCATCTGAATCCAGAGCTTCCTGAGTTTTGCTCCTAGAGGACCTTGTGCAGAGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 90 bp | TGCATGCTCTGGCTTCAGGAAGATGGAAAGGGCAACACTACTCCATaGCTGAGTGGGAAAATTCCAGCCTTATGGTTGAGACCCAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: CMLWLQEDGKGNTTP*LSGKIPALWLRPRD Trigger: ATCTCTGGGTCTCAACCATAAGGCTGGAATTTTCCCACTCAGCCATGGAGTAGTGTTGCCCTTTCCATCTTCCTGAAGCCAGAGCATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 90 bp | ACTAATGGCTTCTACCACATGTTGCATGCTCTGGCTTCAGGAAGATaGAAAGGGCAACACTACTCCATGGCTGAGTGGGAAAATTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TNGFYHMLHALASGR*KGQHYSMAEWENSS Trigger: GCTGGAATTTTCCCACTCAGCCATGGAGTAGTGTTGCCCTTTCCATCTTCCTGAAGCCAGAGCATGCAACATGTGGTAGAAGCCATTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 90 bp | GCTACCCATCTCTTACTAATGGCTTCTACCACATGTTGCATGCTCTaGCTTCAGGAAGATGGAAAGGGCAACACTACTCCATGGCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: ATHLLLMASTTCCML*LQEDGKGNTTPWLS Trigger: ACTCAGCCATGGAGTAGTGTTGCCCTTTCCATCTTCCTGAAGCCAGAGCATGCAACATGTGGTAGAAGCCATTAGTAAGAGATGGGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS TCA 90 bp | CCTTTTATAAGAGTACTCATCCTGTTTATGAGGGCTCCACCATCATaGCCTAATTACTTCCCAAAGTCCCTACCTCCTAATACCATCACT | + |
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Preference number: 5 (lower is better) Translates to: PFIRVLILFMRAPPS*PNYFPKSLPPNTIT Trigger: AGTGATGGTATTAGGAGGTAGGGACTTTGGGAAGTAATTAGGTCATGATGGTGGAGCCCTCATAAACAGGATGAGTACTCTTATAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS TCA 90 bp | TTCAACTTTTCAGGTGGCAGAAAATCTATTTCTTCTCAGCGGGTATaGCAGATTAAAGATGACTGTAAATTCTTCACCACTGCTCCCATT | + |
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Preference number: 5 (lower is better) Translates to: FNFSGGRKSISSQRV*QIKDDCKFFTTAPI Trigger: AATGGGAGCAGTGGTGAAGAATTTACAGTCATCTTTAATCTGTCATACCCGCTGAGAAGAAATAGATTTTCTGCCACCTGAAAAGTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS GCA 72 bp | TTCTTCACCACTGCTCCCATTAGGAGGCGGGGTCCTTaGCCCTTCCTGCTGAAGCCAGGTGGGTTCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: FFTTAPIRRRGP*PFLLKPGGFCD Trigger: GTCACAGAACCCACCTGGCTTCAGCAGGAAGGGGCAAGGACCCCGCCTCCTAATGGGAGCAGTGGTGAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 72 bp | GGAGGCAGGTATTTGGCAAGTGCGCTAGGAAGCCATTaGGCTGTTCCCCCTCAGCAGGCAGCTCTGCACAAG | + |
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Preference number: 6 (lower is better) Translates to: GGRYLASALGSH*AVPPQQAALHK Trigger: CTTGTGCAGAGCTGCCTGCTGAGGGGGAACAGCCCAATGGCTTCCTAGCGCACTTGCCAAATACCTGCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 72 bp | AATGCTATGCCAGTTGCCAGGCCCAAGACTAGAGACTaGCAGCTTCTGCCTCCTGTTTCCAGAGCCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NAMPVARPKTRD*QLLPPVSRARP Trigger: GGGCCTGGCTCTGGAAACAGGAGGCAGAAGCTGCCAGTCTCTAGTCTTGGGCCTGGCAACTGGCATAGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS GCA 72 bp | GAAGCCATTGGGCTGTTCCCCCTCAGCAGGCAGCTCTaGACAAGGTCCTCTAGGAGCAAAACTCAGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: EAIGLFPLSRQL*TRSSRSKTQEA Trigger: AGCTTCCTGAGTTTTGCTCCTAGAGGACCTTGTGCAGAGCTGCCTGCTGAGGGGGAACAGCCCAATGGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS GCA 72 bp | AAGAAGCAGACGGCTTGGAGGCAGGTATTTGGCAAGTaGGCTAGGAAGCCATTGGGCTGTTCCCCCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KKQTAWRQVFGK*ARKPLGCSPSA Trigger: TGCTGAGGGGGAACAGCCCAATGGCTTCCTAGCGCACTTGCCAAATACCTGCCTCCAAGCCGTCTGCTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 72 bp | CTTCTTCTAGGACCCTTCGCCCAATCAGACGGCAGCTaGACTGAGCTGCTGCCATCACCTCAGGAAAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLLGPFAQSDGS*TELLPSPQESH Trigger: ATGGCTTTCCTGAGGTGATGGCAGCAGCTCAGTCCAGCTGCCGTCTGATTGGGCGAAGGGTCCTAGAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS TCA 72 bp | TCCTTGCCCCTTCCTGCTGAAGCCAGGTGGGTTCTGTaGCTGCTTGAGCGATGGAATAGGGCGGAAGTAATG | + |
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Preference number: 6 (lower is better) Translates to: SLPLPAEARWVL*LLERWNRAEVM Trigger: CATTACTTCCGCCCTATTCCATCGCTCAAGCAGTCACAGAACCCACCTGGCTTCAGCAGGAAGGGGCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS GCA 72 bp | CTGCTTGAGCGATGGAATAGGGCGGAAGTAATGCTATaGCAGTTGCCAGGCCCAAGACTAGAGACTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLERWNRAEVML*QLPGPRLETGS Trigger: GCTGCCAGTCTCTAGTCTTGGGCCTGGCAACTGGCATAGCATTACTTCCGCCCTATTCCATCGCTCAAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CAA 72 bp | GAGCGATGGAATAGGGCGGAAGTAATGCTATGCCAGTaGCCAGGCCCAAGACTAGAGACTGGCAGCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ERWNRAEVMLCQ*PGPRLETGSFC Trigger: GCAGAAGCTGCCAGTCTCTAGTCTTGGGCCTGGCAACTGGCATAGCATTACTTCCGCCCTATTCCATCGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CAA 72 bp | CCCAGTAGCCACGAGTCCAGACTTGGGGCCATGCCCTaGACTGCTACCCATCTCTTACTAATGGCTTCTACC | + |
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Preference number: 6 (lower is better) Translates to: PSSHESRLGAMP*TATHLLLMAST Trigger: GGTAGAAGCCATTAGTAAGAGATGGGTAGCAGTCAAGGGCATGGCCCCAAGTCTGGACTCGTGGCTACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CAA 90 bp | CCCTTTCTCCCCAGTAGCCACGAGTCCAGACTTGGGGCCATGCCCTaGACTGCTACCCATCTCTTACTAATGGCTTCTACCACATGTTGC | + |
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Preference number: 6 (lower is better) Translates to: PFLPSSHESRLGAMP*TATHLLLMASTTCC Trigger: GCAACATGTGGTAGAAGCCATTAGTAAGAGATGGGTAGCAGTCAAGGGCATGGCCCCAAGTCTGGACTCGTGGCTACTGGGGAGAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 72 bp | GTCTCTGTTTTCTCGTCTTCTAAGGACATCCGTCATTaGGTTAGGGCTCCCTCTACTCCAGCGTGGCATCAC | + |
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Preference number: 6 (lower is better) Translates to: VSVFSSSKDIRH*VRAPSTPAWHH Trigger: GTGATGCCACGCTGGAGTAGAGGGAGCCCTAACCCAATGACGGATGTCCTTAGAAGACGAGAAAACAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CAA 72 bp | ACATCTGAAGAAAGTACCATTTCTCAGGACCCAGCCTaGGAGAGCCTGGTCTGCATCATAGGGCAGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TSEESTISQDPA*ESLVCIIGQLG Trigger: CCCCAACTGCCCTATGATGCAGACCAGGCTCTCCAAGGCTGGGTCCTGAGAAATGGTACTTTCTTCAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CAA 90 bp | CAAGATCAGGGTGCCAGCATGGTTCTGGTGTGGGCCCTCTATGGCTaGCAGACTGCCAACTTCTTATTGGAAAGAAAGCACAGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: QDQGASMVLVWALYG*QTANFLLERKHRSS Trigger: AGAGCTCCTGTGCTTTCTTTCCAATAAGAAGTTGGCAGTCTGCAAGCCATAGAGGGCCCACACCAGAACCATGCTGGCACCCTGATCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS GCA 72 bp | CATGGTTCTGGTGTGGGCCCTCTATGGCTTGCAGACTaGCAACTTCTTATTGGAAAGAAAGCACAGGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HGSGVGPLWLAD*QLLIGKKAQEL Trigger: GAGCTCCTGTGCTTTCTTTCCAATAAGAAGTTGGCAGTCTGCAAGCCATAGAGGGCCCACACCAGAACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS GCA 72 bp | TTCTCAATTTTGGAAGCTGGAAGTCCAAGATCAGGGTaGCAGCATGGTTCTGGTGTGGGCCCTCTATGGCTT | + |
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Preference number: 6 (lower is better) Translates to: FSILEAGSPRSG*QHGSGVGPLWL Trigger: AAGCCATAGAGGGCCCACACCAGAACCATGCTGGCACCCTGATCTTGGACTTCCAGCTTCCAAAATTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 72 bp | GCACAAGGTCCTCTAGGAGCAAAACTCAGGAAGCTCTaGATTCAGATGCCACTACCAAAGAACAGTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: AQGPLGAKLRKL*IQMPLPKNSPG Trigger: ACCTGGACTGTTCTTTGGTAGTGGCATCTGAATCCAGAGCTTCCTGAGTTTTGCTCCTAGAGGACCTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 72 bp | TGGCTTCAGGAAGATGGAAAGGGCAACACTACTCCATaGCTGAGTGGGAAAATTCCAGCCTTATGGTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: WLQEDGKGNTTP*LSGKIPALWLR Trigger: TCTCAACCATAAGGCTGGAATTTTCCCACTCAGCCATGGAGTAGTGTTGCCCTTTCCATCTTCCTGAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CAA 72 bp | ACTCCATGGCTGAGTGGGAAAATTCCAGCCTTATGGTaGAGACCCAGAGATAACACTGCTGAGGAAGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: TPWLSGKIPALW*RPRDNTAEEVS Trigger: GCTTACTTCCTCAGCAGTGTTATCTCTGGGTCTCAACCATAAGGCTGGAATTTTCCCACTCAGCCATGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CAA 90 bp | GGCAACACTACTCCATGGCTGAGTGGGAAAATTCCAGCCTTATGGTaGAGACCCAGAGATAACACTGCTGAGGAAGTAAGCTTCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GNTTPWLSGKIPALW*RPRDNTAEEVSFSF Trigger: AAAAGAGAAGCTTACTTCCTCAGCAGTGTTATCTCTGGGTCTCAACCATAAGGCTGGAATTTTCCCACTCAGCCATGGAGTAGTGTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CCA 72 bp | CTCTTACTAATGGCTTCTACCACATGTTGCATGCTCTaGCTTCAGGAAGATGGAAAGGGCAACACTACTCCA | + |
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Preference number: 6 (lower is better) Translates to: LLLMASTTCCML*LQEDGKGNTTP Trigger: TGGAGTAGTGTTGCCCTTTCCATCTTCCTGAAGCCAGAGCATGCAACATGTGGTAGAAGCCATTAGTAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS CAA 72 bp | TGCTACCCATCTCTTACTAATGGCTTCTACCACATGTaGCATGCTCTGGCTTCAGGAAGATGGAAAGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: CYPSLTNGFYHM*HALASGRWKGQ Trigger: TTGCCCTTTCCATCTTCCTGAAGCCAGAGCATGCAACATGTGGTAGAAGCCATTAGTAAGAGATGGGTAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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| CDS TCA 72 bp | TCAGGTGGCAGAAAATCTATTTCTTCTCAGCGGGTATaGCAGATTAAAGATGACTGTAAATTCTTCACCACT | + |
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Preference number: 6 (lower is better) Translates to: SGGRKSISSQRV*QIKDDCKFFTT Trigger: AGTGGTGAAGAATTTACAGTCATCTTTAATCTGTCATACCCGCTGAGAAGAAATAGATTTTCTGCCACCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531559.1 |
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