Pregenerated sensors for LINC02546 (Homo sapiens)
Ensembl gene IDs: ENSG00000255117Ensembl transcript IDs: ENST00000527492.6, ENST00000528119.2, ENST00000656808.1, ENST00000656975.1, ENST00000657882.1, ENST00000658163.1, ENST00000658603.1, ENST00000659062.1, ENST00000659640.1, ENST00000660023.1, ENST00000660254.1, ENST00000661544.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGTGTATCAGGACAAGGCACATTGTTCTTAGTGTGTCCACCCTCCTaGGCTGGCTTTGCCTTCTCAGAGCTCCTTAATTCACTTGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: CVSGQGTLFLVCPPS*AGFAFSELLNSLVG Trigger: TCCTACAAGTGAATTAAGGAGCTCTGAGAAGGCAAAGCCAGCCCAGGAGGGTGGACACACTAAGAACAATGTGCCTTGTCCTGATACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000527492.6 ENST00000528119.2 ENST00000656808.1 ENST00000656975.1 ENST00000657882.1 ENST00000658603.1 ENST00000659062.1 ENST00000659640.1 ENST00000660023.1 ENST00000661544.1 |
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| CDS CCA 90 bp | GCAATGTCACCACTGTCACCACCATTGACTCCAGCTTCAGATTGGTaGGACTTGTTCCAGAAGAATGGCTGTACCTTGAGTATTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: AMSPLSPPLTPASDW*DLFQKNGCTLSIAA Trigger: AGCAGCAATACTCAAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGACATTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CCA 90 bp | TCTGCAATGTCACCACTGTCACCACCATTGACTCCAGCTTCAGATTaGTGGGACTTGTTCCAGAAGAATGGCTGTACCTTGAGTATTGCT | + |
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Preference number: 5 (lower is better) Translates to: SAMSPLSPPLTPASD*WDLFQKNGCTLSIA Trigger: AGCAATACTCAAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGACATTGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS TCA 90 bp | CTCAACTTTCTTACTTTTCTGCAATGTCACCACTGTCACCACCATTaGCTCCAGCTTCAGATTGGTGGGACTTGTTCCAGAAGAATGGCT | + |
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Preference number: 5 (lower is better) Translates to: LNFLTFLQCHHCHHH*LQLQIGGTCSRRMA Trigger: AGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGACATTGCAGAAAAGTAAGAAAGTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CCA 90 bp | AGGGATTGGAGGTATTCTGGTGAGGTGAGGGGTAACATCTTAGGTTaGATACTCAGATTTTGTTACCTATACCACAACTGTGTATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RDWRYSGEVRGNILG*ILRFCYLYHNCVSG Trigger: TCCTGATACACAGTTGTGGTATAGGTAACAAAATCTGAGTATCCAACCTAAGATGTTACCCCTCACCTCACCAGAATACCTCCAATCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000527492.6 ENST00000528119.2 ENST00000656808.1 ENST00000656975.1 ENST00000657882.1 ENST00000658603.1 ENST00000659062.1 ENST00000659640.1 ENST00000660023.1 ENST00000661544.1 |
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| CDS TCA 90 bp | AAAACAGAAATGCAGAAAGGAATCAGAAGTAGCATAGTGGGAGGTTaGATCCCCCTACTACTAAGGTGGGTTTCAGTTTGGTTGTTACTG | + |
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Preference number: 5 (lower is better) Translates to: KTEMQKGIRSSIVGG*IPLLLRWVSVWLLL Trigger: CAGTAACAACCAAACTGAAACCCACCTTAGTAGTAGGGGGATTCAACCTCCCACTATGCTACTTCTGATTCCTTTCTGCATTTCTGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS GCA 90 bp | CAGTTGTTATCCACAGGGGATTGGTTTGAAAATCCACAACCTCTGTaGTATGAGCTGATTAATATCTTCGATGCATTTCTTATCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: QLLSTGDWFENPQPL*YELINIFDAFLIQL Trigger: CAGCTGGATAAGAAATGCATCGAAGATATTAATCAGCTCATAGCACAGAGGTTGTGGATTTTCAAACCAATCCCCTGTGGATAACAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527492.6 |
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| CDS GCA 90 bp | CTGCATTCTTTTCATCCACTTTCAAGGCGATTATATCTTGGTCTGTaGTATGTGTGCCCAATGAAAGTTTTGTACACATGTGTCATGGAC | + |
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Preference number: 5 (lower is better) Translates to: LHSFHPLSRRLYLGL*YVCPMKVLYTCVMD Trigger: GTCCATGACACATGTGTACAAAACTTTCATTGGGCACACATAGCACAGACCAAGATATAATCGCCTTGAAAGTGGATGAAAAGAATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656975.1 |
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| CDS GCA 90 bp | GAAGTCCTTCTCAGGCCATATTCAGTTTGCTTGTTTCTGTTATACTaGAATTGGCCAAGACTCAGCTATAATTACAGGCACATACTCCTA | + |
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Preference number: 5 (lower is better) Translates to: EVLLRPYSVCLFLLY*NWPRLSYNYRHILL Trigger: TAGGAGTATGTGCCTGTAATTATAGCTGAGTCTTGGCCAATTGCAGTATAACAGAAACAAGCAAACTGAATATGGCCTGAGAAGGACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS CCA 90 bp | CCTTTAAATGGTCTTACTCTGCGACAGTTGTTATCCACAGGGGATTaGTTTGAAAATCCACAACCTCTGTGCTATGAGCTGATTAATATC | + |
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Preference number: 5 (lower is better) Translates to: PLNGLTLRQLLSTGD*FENPQPLCYELINI Trigger: GATATTAATCAGCTCATAGCACAGAGGTTGTGGATTTTCAAACCAATCCCCTGTGGATAACAACTGTCGCAGAGTAAGACCATTTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000527492.6 ENST00000658603.1 ENST00000661544.1 |
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| CDS TCA 90 bp | CCATACCACTGGGTTCCTGCTTTTCAATATTTCCAGGCAAAGTGGTaGTGGGAGAAATCAACCATTTATCCTTTTATCATTACTAATCCC | + |
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Preference number: 5 (lower is better) Translates to: PYHWVPAFQYFQAKW*WEKSTIYPFIITNP Trigger: GGGATTAGTAATGATAAAAGGATAAATGGTTGATTTCTCCCATCACCACTTTGCCTGGAAATATTGAAAAGCAGGAACCCAGTGGTATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS TCA 90 bp | CCACAGGGGATTGGTTTGAAAATCCACAACCTCTGTGCTATGAGCTaGTTAATATCTTCGATGCATTTCTTATCCAGTTTGCAGACATTT | + |
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Preference number: 5 (lower is better) Translates to: PQGIGLKIHNLCAMS*LISSMHFLSSLQTF Trigger: AAATGTCTGCAAACTGGATAAGAAATGCATCGAAGATATTAATCAGCTCATAGCACAGAGGTTGTGGATTTTCAAACCAATCCCCTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661544.1 |
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| CDS GCA 90 bp | CAGTTGTTATCCACAGGGGATTGGTTTGAAAATCCACAACCTCTGTaGTATGAGCTGATTAATATCTTCGATGCATTTCTTATCCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: QLLSTGDWFENPQPL*YELINIFDAFLIQL Trigger: CAACTGGATAAGAAATGCATCGAAGATATTAATCAGCTCATAGCACAGAGGTTGTGGATTTTCAAACCAATCCCCTGTGGATAACAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658603.1 |
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| CDS CCA 90 bp | CTTCTCAGGCCATATTCAGTTTGCTTGTTTCTGTTATACTGCAATTaGCCAAGACTCAGCTATAATTACAGGCACATACTCCTAAATTGG | + |
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Preference number: 5 (lower is better) Translates to: LLRPYSVCLFLLYCN*PRLSYNYRHILLNW Trigger: CCAATTTAGGAGTATGTGCCTGTAATTATAGCTGAGTCTTGGCCAATTGCAGTATAACAGAAACAAGCAAACTGAATATGGCCTGAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS GCA 90 bp | CACAAGGACTCAAATATAGAAGTCCTTCTCAGGCCATATTCAGTTTaGTTGTTTCTGTTATACTGCAATTGGCCAAGACTCAGCTATAAT | + |
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Preference number: 5 (lower is better) Translates to: HKDSNIEVLLRPYSV*LFLLYCNWPRLSYN Trigger: ATTATAGCTGAGTCTTGGCCAATTGCAGTATAACAGAAACAAGCAAACTGAATATGGCCTGAGAAGGACTTCTATATTTGAGTCCTTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS GCA 90 bp | CAGTTGTTATCCACAGGGGATTGGTTTGAAAATCCACAACCTCTGTaGTATGAGCTGATTAATATCTTCGATGCATTTCTTATCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: QLLSTGDWFENPQPL*YELINIFDAFLIQF Trigger: AAACTGGATAAGAAATGCATCGAAGATATTAATCAGCTCATAGCACAGAGGTTGTGGATTTTCAAACCAATCCCCTGTGGATAACAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661544.1 |
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| CDS GCA 72 bp | AAGTCCATAGCACCTTCTCCCTCTCTTGCTTGCTCCTaGTCTGGCCATGTAACATACCTGCTCCCCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: KSIAPSPSLACS*SGHVTYLLPLG Trigger: GCCAAGGGGGAGCAGGTATGTTACATGGCCAGAGCAGGAGCAAGCAAGAGAGGGAGAAGGTGCTATGGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000659640.1 ENST00000660023.1 |
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| CDS TCA 72 bp | CTCAGCCTCAGTCTTAGTGCCCCTGAGTTTGTGGGGTaGAGCTTTCTCAGTAATCTTGTACTTGTCCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LSLSLSAPEFVG*SFLSNLVLVPG Trigger: CCCCGGGACAAGTACAAGATTACTGAGAAAGCTTCACCCCACAAACTCAGGGGCACTAAGACTGAGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000528119.2 ENST00000656975.1 ENST00000658163.1 ENST00000659640.1 ENST00000660254.1 |
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| CDS CAA 90 bp | AGTTCTGGTCATTTAAAAGTCCATAGCACCTTCTCCCTCTCTTGCTaGCTCCTGCTCTGGCCATGTAACATACCTGCTCCCCCTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSGHLKVHSTFSLSC*LLLWPCNIPAPPWP Trigger: AGGCCAAGGGGGAGCAGGTATGTTACATGGCCAGAGCAGGAGCAAGCAAGAGAGGGAGAAGGTGCTATGGACTTTTAAATGACCAGAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659640.1 ENST00000660023.1 |
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| CDS CCA 72 bp | GGACAAGGCACATTGTTCTTAGTGTGTCCACCCTCCTaGGCTGGCTTTGCCTTCTCAGAGCTCCTTAATTCA | + |
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Preference number: 6 (lower is better) Translates to: GQGTLFLVCPPS*AGFAFSELLNS Trigger: TGAATTAAGGAGCTCTGAGAAGGCAAAGCCAGCCCAGGAGGGTGGACACACTAAGAACAATGTGCCTTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000527492.6 ENST00000528119.2 ENST00000656808.1 ENST00000656975.1 ENST00000657882.1 ENST00000658603.1 ENST00000659062.1 ENST00000659640.1 ENST00000660023.1 ENST00000661544.1 |
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| CDS CCA 72 bp | CCACTGTCACCACCATTGACTCCAGCTTCAGATTGGTaGGACTTGTTCCAGAAGAATGGCTGTACCTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: PLSPPLTPASDW*DLFQKNGCTLS Trigger: ACTCAAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CCA 72 bp | TCACCACTGTCACCACCATTGACTCCAGCTTCAGATTaGTGGGACTTGTTCCAGAAGAATGGCTGTACCTTG | + |
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Preference number: 6 (lower is better) Translates to: SPLSPPLTPASD*WDLFQKNGCTL Trigger: CAAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 72 bp | CGTTACGGCTCAGCCTCAGTCTTAGTGCCCCTGAGTTaGTGGGGTGAAGCTTTCTCAGTAATCTTGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: RYGSASVLVPLS*WGEAFSVILYL Trigger: CAAGTACAAGATTACTGAGAAAGCTTCACCCCACAAACTCAGGGGCACTAAGACTGAGGCTGAGCCGTAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000528119.2 ENST00000656975.1 ENST00000658163.1 ENST00000659640.1 ENST00000660254.1 |
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| CDS CAA 72 bp | GTCACCACTGTCACCACCATTGACTCCAGCTTCAGATaGGTGGGACTTGTTCCAGAAGAATGGCTGTACCTT | + |
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Preference number: 6 (lower is better) Translates to: VTTVTTIDSSFR*VGLVPEEWLYL Trigger: AAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 72 bp | CATTTAAAAGTCCATAGCACCTTCTCCCTCTCTTGCTaGCTCCTGCTCTGGCCATGTAACATACCTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: HLKVHSTFSLSC*LLLWPCNIPAP Trigger: GGGAGCAGGTATGTTACATGGCCAGAGCAGGAGCAAGCAAGAGAGGGAGAAGGTGCTATGGACTTTTAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659640.1 ENST00000660023.1 |
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| CDS CAA 90 bp | TCACCACTGTCACCACCATTGACTCCAGCTTCAGATTGGTGGGACTaGTTCCAGAAGAATGGCTGTACCTTGAGTATTGCTGCTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPLSPPLTPASDWWD*FQKNGCTLSIAAVF Trigger: GAAGACAGCAGCAATACTCAAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 90 bp | CACATTCCTCAAATTCCTCCAGGCATCCTCTCCGTGGGGGATGGGTaGGTAGAAGGTAATTCTCAAAGTTTCTGTTACACTGCGATTGGC | + |
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Preference number: 6 (lower is better) Translates to: HIPQIPPGILSVGDG*VEGNSQSFCYTAIG Trigger: GCCAATCGCAGTGTAACAGAAACTTTGAGAATTACCTTCTACCAACCCATCCCCCACGGAGAGGATGCCTGGAGGAATTTGAGGAATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS GCA 72 bp | GGGTTTCAGTTTGGTTGTTACTGTGGTTGCTCTCAGTaGACCACATTCCTCAAATTCCTCCAGGCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: GFQFGCYCGCSQ*TTFLKFLQASS Trigger: AGAGGATGCCTGGAGGAATTTGAGGAATGTGGTGCACTGAGAGCAACCACAGTAACAACCAAACTGAAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS GCA 72 bp | GGTCATTTAAAAGTCCATAGCACCTTCTCCCTCTCTTaGTTGCTCCTGCTCTGGCCATGTAACATACCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GHLKVHSTFSLS*LLLLWPCNIPA Trigger: AGCAGGTATGTTACATGGCCAGAGCAGGAGCAAGCAAGAGAGGGAGAAGGTGCTATGGACTTTTAAATGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659640.1 ENST00000660023.1 |
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| CDS CAA 90 bp | TTCTGCAATGTCACCACTGTCACCACCATTGACTCCAGCTTCAGATaGGTGGGACTTGTTCCAGAAGAATGGCTGTACCTTGAGTATTGC | + |
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Preference number: 6 (lower is better) Translates to: FCNVTTVTTIDSSFR*VGLVPEEWLYLEYC Trigger: GCAATACTCAAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGACATTGCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 90 bp | CCAGCTTCAGATTGGTGGGACTTGTTCCAGAAGAATGGCTGTACCTaGAGTATTGCTGCTGTCTTCCTTAGAGCTACCATTCTGCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: PASDWWDLFQKNGCT*SIAAVFLRATILLN Trigger: ATTCAGCAGAATGGTAGCTCTAAGGAAGACAGCAGCAATACTCAAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 90 bp | CCTCAACTTTCTTACTTTTCTGCAATGTCACCACTGTCACCACCATaGACTCCAGCTTCAGATTGGTGGGACTTGTTCCAGAAGAATGGC | + |
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Preference number: 6 (lower is better) Translates to: PQLSYFSAMSPLSPP*TPASDWWDLFQKNG Trigger: GCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGACATTGCAGAAAAGTAAGAAAGTTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS TCA 72 bp | CTTACTTTTCTGCAATGTCACCACTGTCACCACCATTaGCTCCAGCTTCAGATTGGTGGGACTTGTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LTFLQCHHCHHH*LQLQIGGTCSR Trigger: TCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGACATTGCAGAAAAGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 72 bp | TCACCACCATTGACTCCAGCTTCAGATTGGTGGGACTaGTTCCAGAAGAATGGCTGTACCTTGAGTATTGCT | + |
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Preference number: 6 (lower is better) Translates to: SPPLTPASDWWD*FQKNGCTLSIA Trigger: AGCAATACTCAAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 72 bp | TCTTACTTTTCTGCAATGTCACCACTGTCACCACCATaGACTCCAGCTTCAGATTGGTGGGACTTGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SYFSAMSPLSPP*TPASDWWDLFQ Trigger: CTGGAACAAGTCCCACCAATCTGAAGCTGGAGTCAATGGTGGTGACAGTGGTGACATTGCAGAAAAGTAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 72 bp | AGGTTGAATCCCCCTACTACTAAGGTGGGTTTCAGTTaGGTTGTTACTGTGGTTGCTCTCAGTGCACCACAT | + |
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Preference number: 6 (lower is better) Translates to: RLNPPTTKVGFS*VVTVVALSAPH Trigger: ATGTGGTGCACTGAGAGCAACCACAGTAACAACCAAACTGAAACCCACCTTAGTAGTAGGGGGATTCAACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS TCA 72 bp | ATGCAGAAAGGAATCAGAAGTAGCATAGTGGGAGGTTaGATCCCCCTACTACTAAGGTGGGTTTCAGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: MQKGIRSSIVGG*IPLLLRWVSVW Trigger: CCAAACTGAAACCCACCTTAGTAGTAGGGGGATTCAACCTCCCACTATGCTACTTCTGATTCCTTTCTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS CAA 72 bp | GATTGGTGGGACTTGTTCCAGAAGAATGGCTGTACCTaGAGTATTGCTGCTGTCTTCCTTAGAGCTACCATT | + |
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Preference number: 6 (lower is better) Translates to: DWWDLFQKNGCT*SIAAVFLRATI Trigger: AATGGTAGCTCTAAGGAAGACAGCAGCAATACTCAAGGTACAGCCATTCTTCTGGAACAAGTCCCACCAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 72 bp | TGTGTGTGTGTGTGGTGGTTGTTGCAGCCCATTTTATaGTCAGTAGCTCTAGAGAAGTCAACCATACCACTG | + |
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Preference number: 6 (lower is better) Translates to: CVCVWWLLQPIL*SVALEKSTIPL Trigger: CAGTGGTATGGTTGACTTCTCTAGAGCTACTGACAATAAAATGGGCTGCAACAACCACCACACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 72 bp | CTACTAAGGTGGGTTTCAGTTTGGTTGTTACTGTGGTaGCTCTCAGTGCACCACATTCCTCAAATTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LLRWVSVWLLLW*LSVHHIPQIPP Trigger: TGGAGGAATTTGAGGAATGTGGTGCACTGAGAGCAACCACAGTAACAACCAAACTGAAACCCACCTTAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS GCA 72 bp | CTCAGTAATCTTGTACTTGTCCCGGGGTTAGAGTTTTaGTGTTCTTCATTTCTCCAACCACAGTTGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LSNLVLVPGLEF*CSSFLQPQLIF Trigger: GAAGATCAACTGTGGTTGGAGAAATGAAGAACAGCAAAACTCTAACCCCGGGACAAGTACAAGATTACTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000528119.2 ENST00000656975.1 ENST00000658163.1 ENST00000659640.1 ENST00000660254.1 |
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| CDS CCA 72 bp | TGCCAAGTATGTTCATCCATTTTTGGTCCCTTTAAATaGTCTTACTCTGCGACAGTTGTTATCCACAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: CQVCSSIFGPFK*SYSATVVIHRG Trigger: TCCCCTGTGGATAACAACTGTCGCAGAGTAAGACCATTTAAAGGGACCAAAAATGGATGAACATACTTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000527492.6 ENST00000658603.1 ENST00000661544.1 |
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| CDS GCA 72 bp | CTCAGGCCATATTCAGTTTGCTTGTTTCTGTTATACTaGAATTGGCCAAGACTCAGCTATAATTACAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LRPYSVCLFLLY*NWPRLSYNYRH Trigger: GTGCCTGTAATTATAGCTGAGTCTTGGCCAATTGCAGTATAACAGAAACAAGCAAACTGAATATGGCCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS CAA 72 bp | TATCTTGGTCTGTGCTATGTGTGCCCAATGAAAGTTTaGTACACATGTGTCATGGACTTATGTTCTCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: YLGLCYVCPMKV*YTCVMDLCSPQ Trigger: TTGGGGAGAACATAAGTCCATGACACATGTGTACAAAACTTTCATTGGGCACACATAGCACAGACCAAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656975.1 |
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| CDS TCA 72 bp | GGCGATTATATCTTGGTCTGTGCTATGTGTGCCCAATaGAAGTTTTGTACACATGTGTCATGGACTTATGTT | + |
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Preference number: 6 (lower is better) Translates to: GDYILVCAMCAQ*KFCTHVSWTYV Trigger: AACATAAGTCCATGACACATGTGTACAAAACTTTCATTGGGCACACATAGCACAGACCAAGATATAATCGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656975.1 |
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| CDS GCA 72 bp | TTTAAATGGTCTTACTTTGTCCCGGGGTTAGAGTTTTaGTGTTCTTCATTTCTCCAACCACAGTTGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: FKWSYFVPGLEF*CSSFLQPQLIF Trigger: GAAGATCAACTGTGGTTGGAGAAATGAAGAACAGCAAAACTCTAACCCCGGGACAAAGTAAGACCATTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657882.1 ENST00000660023.1 |
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| CDS CAA 72 bp | TGCATTCTTTTCATCCACTTTCAAGGCGATTATATCTaGGTCTGTGCTATGTGTGCCCTAGGTAATCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: CILFIHFQGDYI*VCAMCALGNQV Trigger: TACTTGATTACCTAGGGCACACATAGCACAGACCAAGATATAATCGCCTTGAAAGTGGATGAAAAGAATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000528119.2 ENST00000657882.1 ENST00000658163.1 ENST00000659640.1 ENST00000660023.1 ENST00000660254.1 |
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| CDS CAA 72 bp | AATATAGAAGTCCTTCTCAGGCCATATTCAGTTTGCTaGTTTCTGTTATACTGCAATTGGCCAAGACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: NIEVLLRPYSVC*FLLYCNWPRLS Trigger: GCTGAGTCTTGGCCAATTGCAGTATAACAGAAACAAGCAAACTGAATATGGCCTGAGAAGGACTTCTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS CAA 90 bp | GCCAAAGATCTTTTAGTTCATAGTGCCAAGTATGTTCATCCATTTTaGGTCCCTTTAAATGGTCTTACTCTGCGACAGTTGTTATCCACA | + |
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Preference number: 6 (lower is better) Translates to: AKDLLVHSAKYVHPF*VPLNGLTLRQLLST Trigger: TGTGGATAACAACTGTCGCAGAGTAAGACCATTTAAAGGGACCAAAAATGGATGAACATACTTGGCACTATGAACTAAAAGATCTTTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000527492.6 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 90 bp | CATCCTCCTGCATGTTATCTCTTTGATTCTCAAAACAACCGTGGGTaGACAGAGCATTGGCTAATAGGAAGACAAATATACATACACAAT | + |
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Preference number: 6 (lower is better) Translates to: HPPACYLFDSQNNRG*TEHWLIGRQIYIHN Trigger: ATTGTGTATGTATATTTGTCTTCCTATTAGCCAATGCTCTGTCAACCCACGGTTGTTTTGAGAATCAAAGAGATAACATGCAGGAGGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS TCA 72 bp | GAGCAGATGTTAGCATCATGCTTCCTGTATAGCCAATaGAAGTTTTGTACACATGTGTCATGGACTTATGTT | + |
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Preference number: 6 (lower is better) Translates to: EQMLASCFLYSQ*KFCTHVSWTYV Trigger: AACATAAGTCCATGACACATGTGTACAAAACTTTCATTGGCTATACAGGAAGCATGATGCTAACATCTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659640.1 ENST00000660023.1 |
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| CDS CCA 72 bp | GCATTCTTTTCATCCACTTTCAAGGCGATTATATCTTaGTCTGTGCTATGTGTGCCCAATGAAAGTTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: AFFSSTFKAIIS*SVLCVPNESFV Trigger: TACAAAACTTTCATTGGGCACACATAGCACAGACCAAGATATAATCGCCTTGAAAGTGGATGAAAAGAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656975.1 |
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| CDS CAA 72 bp | CTTTTAGTTCATAGTGCCAAGTATGTTCATCCATTTTaGGTCCCTTTAAATGGTCTTACTCTGCGACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LLVHSAKYVHPF*VPLNGLTLRQL Trigger: CAACTGTCGCAGAGTAAGACCATTTAAAGGGACCAAAAATGGATGAACATACTTGGCACTATGAACTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000527492.6 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 72 bp | GCATGTTATCTCTTTGATTCTCAAAACAACCGTGGGTaGACAGAGCATTGGCTAATAGGAAGACAAATATAC | + |
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Preference number: 6 (lower is better) Translates to: ACYLFDSQNNRG*TEHWLIGRQIY Trigger: GTATATTTGTCTTCCTATTAGCCAATGCTCTGTCAACCCACGGTTGTTTTGAGAATCAAAGAGATAACATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS CAA 72 bp | CTCAAATATAGAAGTCCTTCTCAGGCCATATTCAGTTaGCTTGTTTCTGTTATACTGCAATTGGCCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: LKYRSPSQAIFS*LVSVILQLAKT Trigger: AGTCTTGGCCAATTGCAGTATAACAGAAACAAGCAAACTGAATATGGCCTGAGAAGGACTTCTATATTTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS CAA 90 bp | AAGGACTCAAATATAGAAGTCCTTCTCAGGCCATATTCAGTTTGCTaGTTTCTGTTATACTGCAATTGGCCAAGACTCAGCTATAATTAC | + |
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Preference number: 6 (lower is better) Translates to: KDSNIEVLLRPYSVC*FLLYCNWPRLSYNY Trigger: GTAATTATAGCTGAGTCTTGGCCAATTGCAGTATAACAGAAACAAGCAAACTGAATATGGCCTGAGAAGGACTTCTATATTTGAGTCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658163.1 ENST00000660254.1 |
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| CDS TCA 72 bp | TGGGTTCCTGCTTTTCAATATTTCCAGGCAAAGTGGTaGTGGGAGAAATCAACCATTTATCCTTTTATCATT | + |
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Preference number: 6 (lower is better) Translates to: WVPAFQYFQAKW*WEKSTIYPFII Trigger: AATGATAAAAGGATAAATGGTTGATTTCTCCCATCACCACTTTGCCTGGAAATATTGAAAAGCAGGAACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656808.1 ENST00000658603.1 ENST00000661544.1 |
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| CDS GCA 72 bp | CTCAAATATAGAAATCCTTCTCAGGCCATATTTATTTaGTTTAACAGTGGGAAAATTCTGTCGTTACGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LKYRNPSQAIFI*FNSGKILSLRL Trigger: GAGCCGTAACGACAGAATTTTCCCACTGTTAAAGCAAATAAATATGGCCTGAGAAGGATTTCTATATTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000528119.2 ENST00000656975.1 ENST00000658163.1 ENST00000659640.1 ENST00000660254.1 |
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| CDS CAA 72 bp | TTCTGGGAGGCACCTATCTTTTCTCAGGTGTTAAGCTaGTTGGTTGCTCTGTTGTATGTTGTTATATATTAT | + |
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Preference number: 6 (lower is better) Translates to: FWEAPIFSQVLS*LVALLYVVIYY Trigger: ATAATATATAACAACATACAACAGAGCAACCAACAAGCTTAACACCTGAGAAAAGATAGGTGCCTCCCAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000528119.2 ENST00000657882.1 ENST00000658163.1 ENST00000659640.1 ENST00000660023.1 ENST00000660254.1 |
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| CDS CAA 90 bp | GTTTGTTACTTCTGGGAGGCACCTATCTTTTCTCAGGTGTTAAGCTaGTTGGTTGCTCTGTTGTATGTTGTTATATATTATTATTATGAC | + |
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Preference number: 6 (lower is better) Translates to: VCYFWEAPIFSQVLS*LVALLYVVIYYYYD Trigger: GTCATAATAATAATATATAACAACATACAACAGAGCAACCAACAAGCTTAACACCTGAGAAAAGATAGGTGCCTCCCAGAAGTAACAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000528119.2 ENST00000657882.1 ENST00000658163.1 ENST00000659640.1 ENST00000660023.1 ENST00000660254.1 |
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| CDS CCA 72 bp | TGCCAAGTATGTTCATCCATTTTTGGTCCCTTTAAATaGTCTTACTCAATGAAAGTTTTGTACACATGTGTC | + |
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Preference number: 6 (lower is better) Translates to: CQVCSSIFGPFK*SYSMKVLYTCV Trigger: GACACATGTGTACAAAACTTTCATTGAGTAAGACCATTTAAAGGGACCAAAAATGGATGAACATACTTGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656808.1 |
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| CDS CAA 72 bp | TGGGAGGCACCTATCTTTTCTCAGGTGTTAAGCTTGTaGGTTGCTCTGTTGTATGTTGTTATATATTATTAT | + |
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Preference number: 6 (lower is better) Translates to: WEAPIFSQVLSL*VALLYVVIYYY Trigger: ATAATAATATATAACAACATACAACAGAGCAACCAACAAGCTTAACACCTGAGAAAAGATAGGTGCCTCCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000528119.2 ENST00000657882.1 ENST00000658163.1 ENST00000659640.1 ENST00000660023.1 ENST00000660254.1 |
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| CDS GCA 72 bp | TTAGAAAACTGTGAAACAGTGCATATTCTGAATAAATaGTGTGCGTTATGTGATTCAGAGTGGAATAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: LENCETVHILNK*CALCDSEWNRY Trigger: ATACCTATTCCACTCTGAATCACATAACGCACAGCATTTATTCAGAATATGCACTGTTTCACAGTTTTCTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527492.6 |
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