Pregenerated sensors for LINC02539 (Homo sapiens)

Ensembl gene IDs: ENSG00000234956

Ensembl transcript IDs: ENST00000411615.5, ENST00000419220.1, ENST00000645996.1, ENST00000668179.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GTGTTGGAACAAGCCCTCCAGGTGACAGTGGTGCACGCTCAAGCTTaGTCTAGGCCAGTGCTTCTTCCATTGCCTGGTGCGGCGTTCACT	+
Preference number: 5 (lower is better) Translates to: VLEQALQVTVVHAQA*SRPVLLPLPGAAFT Trigger: AGTGAACGCCGCACCAGGCAATGGAAGAAGCACTGGCCTAGACCAAGCTTGAGCGTGCACCACTGTCACCTGGAGGGCTTGTTCCAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000411615.5 ENST00000419220.1 ENST00000645996.1 ENST00000668179.1
CDS CCA 90 bp	GCCTGGTGCGGCGTTCACTCCACCACCTCTAGTTCTGACCCTCTGTaGTCCCAACTACTCACTACTCAGGAGACTGAAGAGGGAGGATTG	+
Preference number: 5 (lower is better) Translates to: AWCGVHSTTSSSDPL*SQLLTTQETEEGGL Trigger: CAATCCTCCCTCTTCAGTCTCCTGAGTAGTGAGTAGTTGGGACCACAGAGGGTCAGAACTAGAGGTGGTGGAGTGAACGCCGCACCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645996.1
CDS TCA 72 bp	GAGTCCAGCCATCCGTGTTGGAACAAGCCCTCCAGGTaGCAGTGGTGCACGCTCAAGCTTGGTCTAGGCCAG	+
Preference number: 6 (lower is better) Translates to: ESSHPCWNKPSR*QWCTLKLGLGQ Trigger: CTGGCCTAGACCAAGCTTGAGCGTGCACCACTGTCACCTGGAGGGCTTGTTCCAACACGGATGGCTGGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000411615.5 ENST00000419220.1 ENST00000645996.1 ENST00000668179.1
CDS CCA 72 bp	GGCGTTCACTCCACCACCTCTAGTTCTGACCCTCTGTaGTCCCAACTACTCACTACTCAGGAGACTGAAGAG	+
Preference number: 6 (lower is better) Translates to: GVHSTTSSSDPL*SQLLTTQETEE Trigger: CTCTTCAGTCTCCTGAGTAGTGAGTAGTTGGGACCACAGAGGGTCAGAACTAGAGGTGGTGGAGTGAACGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645996.1
CDS TCA 72 bp	CCCAGTGCAGACCTAATAAATCTGAAATTCTGGGGGTaGGTCCAGCCATCCGTGTTGGAACAAGCCCTCCAG	+
Preference number: 6 (lower is better) Translates to: PSADLINLKFWG*VQPSVLEQALQ Trigger: CTGGAGGGCTTGTTCCAACACGGATGGCTGGACTCACCCCCAGAATTTCAGATTTATTAGGTCTGCACTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000411615.5 ENST00000419220.1 ENST00000645996.1 ENST00000668179.1
CDS CAA 72 bp	CACTTGTTAGTAGCAGAGCTGGGATTTGCACCAGGGTaGTTCCAAATTCTAGTCCAGTTTCTTCCTAATATA	+
Preference number: 6 (lower is better) Translates to: HLLVAELGFAPG*FQILVQFLPNI Trigger: TATATTAGGAAGAAACTGGACTAGAATTTGGAACAACCCTGGTGCAAATCCCAGCTCTGCTACTAACAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000411615.5 ENST00000419220.1 ENST00000668179.1

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