Pregenerated sensors for LINC02538 (Homo sapiens)
Ensembl gene IDs: ENSG00000272549Ensembl transcript IDs: ENST00000609107.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCCGGGCTCCTCCGGTTCCGGGAGGTCCACAGCCCAGCAGCAGCTaGCCCTGCACGTTGTCCCCTCCGTCCAGCATCCCGGGGCCGAGG | + |
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Preference number: 5 (lower is better) Translates to: SRAPPVPGGPQPSSS*PCTLSPPSSIPGPR Trigger: CCTCGGCCCCGGGATGCTGGACGGAGGGGACAACGTGCAGGGGCAGCTGCTGCTGGGCTGTGGACCTCCCGGAACCGGAGGAGCCCGGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | CTGCAGCGTAGGGACCGAATAGTGCACGCTGCAGCCTCCCGGGGGTaGAGCCAGTGGGGGATGAACAGACCCGTGGTCCTCCACACAGAG | + |
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Preference number: 5 (lower is better) Translates to: LQRRDRIVHAAASRG*SQWGMNRPVVLHTE Trigger: CTCTGTGTGGAGGACCACGGGTCTGTTCATCCCCCACTGGCTGCACCCCCGGGAGGCTGCAGCGTGCACTATTCGGTCCCTACGCTGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | CCCGGCCCACCCCGTCCAGGACCCTCACCGACTGCCTACAGCCACTaGAGGGTAGAAGGGACCCGAACTTGGTCGAAGAGGAGGAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PGPPRPGPSPTAYSH*RVEGTRTWSKRRKL Trigger: CAGCTTCCTCCTCTTCGACCAAGTTCGGGTCCCTTCTACCCTTCAGTGGCTGTAGGCAGTCGGTGAGGGTCCTGGACGGGGTGGGCCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | TGCAAGGACCAGGCCATACCCATCGCAGTGTGGAAGCTGAGTCCATaGAGTGTCCGGTGGCGAGTGCTGTGCCCACTGGGAGGCTCGCCG | + |
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Preference number: 5 (lower is better) Translates to: CKDQAIPIAVWKLSP*SVRWRVLCPLGGSP Trigger: CGGCGAGCCTCCCAGTGGGCACAGCACTCGCCACCGGACACTGCATGGACTCAGCTTCCACACTGCGATGGGTATGGCCTGGTCCTTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | AGGGACCGAATAGTGCACGCTGCAGCCTCCCGGGGGTGCAGCCAGTaGGGGATGAACAGACCCGTGGTCCTCCACACAGAGGTCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: RDRIVHAAASRGCSQ*GMNRPVVLHTEVST Trigger: TGTGCTGACCTCTGTGTGGAGGACCACGGGTCTGTTCATCCCCCACTGGCTGCACCCCCGGGAGGCTGCAGCGTGCACTATTCGGTCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | CCTCTCGAGCTGCGGGGCAAGGCCTCCAGTCCTGCGTCTTGTGTTTaGGGAGCACGTCAGCTTCCAGGGCAGCAAACTCGCGGTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PLELRGKASSPASCV*GARQLPGQQTRGAS Trigger: GGAAGCACCGCGAGTTTGCTGCCCTGGAAGCTGACGTGCTCCCCAAACACAAGACGCAGGACTGGAGGCCTTGCCCCGCAGCTCGAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | GCAGTGTGGAAGCTGAGTCCATGCAGTGTCCGGTGGCGAGTGCTGTaGCCACTGGGAGGCTCGCCGAAAGCCATCCAAGAGGTCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: AVWKLSPCSVRWRVL*PLGGSPKAIQEVWA Trigger: AGCCCAGACCTCTTGGATGGCTTTCGGCGAGCCTCCCAGTGGGCACAGCACTCGCCACCGGACACTGCATGGACTCAGCTTCCACACTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | GTGCTGTGCCCACTGGGAGGCTCGCCGAAAGCCATCCAAGAGGTCTaGGCTCCTCTGAGGCTGACTCGAGGGGGCTGCCCAGACAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: VLCPLGGSPKAIQEV*APLRLTRGGCPDRK Trigger: TTTTCTGTCTGGGCAGCCCCCTCGAGTCAGCCTCAGAGGAGCCCAGACCTCTTGGATGGCTTTCGGCGAGCCTCCCAGTGGGCACAGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | AGGAATGTGTCGAAACGCACAGCAACATGGCGTCCCCAGGGCTGGTaGCACAGCCCCTCTGGCAACCTGGCTTCTGCGGCAGCTGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: RNVSKRTATWRPQGW*HSPSGNLASAAAGD Trigger: GTCACCAGCTGCCGCAGAAGCCAGGTTGCCAGAGGGGCTGTGTCACCAGCCCTGGGGACGCCATGTTGCTGTGCGTTTCGACACATTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | CCTGGTAGTGCAAGGACCAGGCCATACCCATCGCAGTGTGGAAGCTaGGTCCATGCAGTGTCCGGTGGCGAGTGCTGTGCCCACTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PGSARTRPYPSQCGS*VHAVSGGECCAHWE Trigger: CTCCCAGTGGGCACAGCACTCGCCACCGGACACTGCATGGACTCAGCTTCCACACTGCGATGGGTATGGCCTGGTCCTTGCACTACCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | GTCTCTTTCTGTGCATTTCCCAGCCACGCCCCCAGCTTGGGCCCCTaGGGTCACCTCCCACTCCGGCAATTAAAGCCGAATCCAGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: VSFCAFPSHAPSLGP*GHLPLRQLKPNPGL Trigger: GAGCCCTGGATTCGGCTTTAATTGCCGGAGTGGGAGGTGACCCCAGGGGCCCAAGCTGGGGGCGTGGCTGGGAAATGCACAGAAAGAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | GCCATACCCATCGCAGTGTGGAAGCTGAGTCCATGCAGTGTCCGGTaGCGAGTGCTGTGCCCACTGGGAGGCTCGCCGAAAGCCATCCAA | + |
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Preference number: 5 (lower is better) Translates to: AIPIAVWKLSPCSVR*RVLCPLGGSPKAIQ Trigger: TTGGATGGCTTTCGGCGAGCCTCCCAGTGGGCACAGCACTCGCCACCGGACACTGCATGGACTCAGCTTCCACACTGCGATGGGTATGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | CACAGCGTCAGTTCACTGTCCCTCCCTGGAGGGACCTCCCCCACATaGAACCCTGCTCCAGAAGCATGGGTGGTCTCAGCCTGCATTCCC | + |
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Preference number: 5 (lower is better) Translates to: HSVSSLSLPGGTSPT*NPAPEAWVVSACIP Trigger: GGGAATGCAGGCTGAGACCACCCATGCTTCTGGAGCAGGGTTTCATGTGGGGGAGGTCCCTCCAGGGAGGGACAGTGAACTGACGCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | TCCCCTTGCTGTGTCCTCCTGGCCCTTTCCATGAACCTTTTGTTCTaGCAGGGAGGACGGCCGGTGGCCTGGGTCTCACACTCGGCCACT | + |
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Preference number: 5 (lower is better) Translates to: SPCCVLLALSMNLLF*QGGRPVAWVSHSAT Trigger: AGTGGCCGAGTGTGAGACCCAGGCCACCGGCCGTCCTCCCTGTCAGAACAAAAGGTTCATGGAAAGGGCCAGGAGGACACAGCAAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | CAGTTCACTGTCCCTCCCTGGAGGGACCTCCCCCACATGAAACCCTaGTCCAGAAGCATGGGTGGTCTCAGCCTGCATTCCCCAGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: QFTVPPWRDLPHMKP*SRSMGGLSLHSPGR Trigger: TCTCCCTGGGGAATGCAGGCTGAGACCACCCATGCTTCTGGAGCAGGGTTTCATGTGGGGGAGGTCCCTCCAGGGAGGGACAGTGAACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | CCAGGAATGACCCCAAGGACACAGTCGGGTGACCGGTTATCACCCTaGACACAGGAGGCATCCACACAGAGACGGGTGGACGCAGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: PGMTPRTQSGDRLSP*TQEASTQRRVDAEP Trigger: TGGCTCTGCGTCCACCCGTCTCTGTGTGGATGCCTCCTGTGTCCAGGGTGATAACCGGTCACCCGACTGTGTCCTTGGGGTCATTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | CTCCCACTCCGGCAATTAAAGCCGAATCCAGGGCTCCTTAGCATATaGATTGAGGCGCATCGGAGCCCTCACTGCTGGGCCAGCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LPLRQLKPNPGLLSI*IEAHRSPHCWASPS Trigger: GGAGGGGCTGGCCCAGCAGTGAGGGCTCCGATGCGCCTCAATTCATATGCTAAGGAGCCCTGGATTCGGCTTTAATTGCCGGAGTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | CAAGCGGCAGGAGAAGCCAGGAATGACCCCAAGGACACAGTCGGGTaGCCGGTTATCACCCTGGACACAGGAGGCATCCACACAGAGACG | + |
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Preference number: 5 (lower is better) Translates to: QAAGEARNDPKDTVG*PVITLDTGGIHTET Trigger: CGTCTCTGTGTGGATGCCTCCTGTGTCCAGGGTGATAACCGGTCACCCGACTGTGTCCTTGGGGTCATTCCTGGCTTCTCCTGCCGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | CTGGAGGGACCTCCCCCACATGAAACCCTGCTCCAGAAGCATGGGTaGTCTCAGCCTGCATTCCCCAGGGAGAATGAGGTCTCTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: LEGPPPHETLLQKHG*SQPAFPRENEVSPS Trigger: AGAAGGAGAGACCTCATTCTCCCTGGGGAATGCAGGCTGAGACCACCCATGCTTCTGGAGCAGGGTTTCATGTGGGGGAGGTCCCTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | GGCAGAAGGTGCTTGATAAACCACAGGCTCCTGCCCCCAGCACTCTaGCCCCAGGGACACTCAGACGTGATAGAGTCCAGACACATCCCT | + |
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Preference number: 5 (lower is better) Translates to: GRRCLINHRLLPPAL*PQGHSDVIESRHIP Trigger: AGGGATGTGTCTGGACTCTATCACGTCTGAGTGTCCCTGGGGCCAGAGTGCTGGGGGCAGGAGCCTGTGGTTTATCAAGCACCTTCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | GCCATCCAAGAGGTCTGGGCTCCTCTGAGGCTGACTCGAGGGGGCTaGCCAGACAGAAAATCCTGGCCTTGCGATTTCAATCTCAGACCA | + |
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Preference number: 5 (lower is better) Translates to: AIQEVWAPLRLTRGG*PDRKSWPCDFNLRP Trigger: TGGTCTGAGATTGAAATCGCAAGGCCAGGATTTTCTGTCTGGGCAGCCCCCTCGAGTCAGCCTCAGAGGAGCCCAGACCTCTTGGATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | GAACAGACCCGTGGTCCTCCACACAGAGGTCAGCACACATCCAGGTaGATTTCCAAACACACCAGGTTGGTGTGTCTGCCAGGACCCCTG | + |
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Preference number: 5 (lower is better) Translates to: EQTRGPPHRGQHTSR*ISKHTRLVCLPGPL Trigger: CAGGGGTCCTGGCAGACACACCAACCTGGTGTGTTTGGAAATGCACCTGGATGTGTGCTGACCTCTGTGTGGAGGACCACGGGTCTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | AAGCTGGGTCTCTCAGTGGCTCCTCTCCTTCCAGCCAATGTGCAATaGAGTCCAGCTCAGTCTCTGCAAGCCCAGCCATGGAGGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: KLGLSVAPLLPANVQ*SPAQSLQAQPWRTP Trigger: TGGAGTCCTCCATGGCTGGGCTTGCAGAGACTGAGCTGGACTGCATTGCACATTGGCTGGAAGGAGAGGAGCCACTGAGAGACCCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | GCAAAACGGGGTCCCGGGTCAGTGTTCACAGAGGGTCTCAAACCCTaGAGGACCCTGAAATTGTCTGGGATCCACACCAGTCGGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: AKRGPGSVFTEGLKP*RTLKLSGIHTSRKK Trigger: TTTCTTCCGACTGGTGTGGATCCCAGACAATTTCAGGGTCCTGCAGGGTTTGAGACCCTCTGTGAACACTGACCCGGGACCCCGTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | CCTGGCCTTGCGATTTCAATCTCAGACCAACCCACCTGTGAACACTaGCTTCTCATGTGGACGTGGGGAATGAGGAGGAGACACGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PGLAISISDQPTCEH*LLMWTWGMRRRHGK Trigger: CTTGCCGTGTCTCCTCCTCATTCCCCACGTCCACATGAGAAGGCAGTGTTCACAGGTGGGTTGGTCTGAGATTGAAATCGCAAGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | GCACACAGCCTTTGCCGTTTCAGAGCCAGGGCTTTTCCTGAAGACTaGATTTCTATCAGCTGCACCTTGTGCAGGTCCCACCCCCTCATG | + |
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Preference number: 5 (lower is better) Translates to: AHSLCRFRARAFPED*ISISCTLCRSHPLM Trigger: CATGAGGGGGTGGGACCTGCACAAGGTGCAGCTGATAGAAATGCAGTCTTCAGGAAAAGCCCTGGCTCTGAAACGGCAAAGGCTGTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | CCTTCTCATGTGGACGTGGGGAATGAGGAGGAGACACGGCAAGCTTaGGACCAAAGGAAAAAGAGGCTGACCTTGAAGCCTCCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PSHVDVGNEEETRQA*DQRKKRLTLKPPPV Trigger: CACTGGAGGAGGCTTCAAGGTCAGCCTCTTTTTCCTTTGGTCCCAAGCTTGCCGTGTCTCCTCCTCATTCCCCACGTCCACATGAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | ACTGCATTTCTATCAGCTGCACCTTGTGCAGGTCCCACCCCCTCATaGCCCTCCCTTACTCTAACAGGTGCAGAAGGGGAAGGAATGTCT | + |
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Preference number: 5 (lower is better) Translates to: TAFLSAAPCAGPTPS*PSLTLTGAEGEGMS Trigger: AGACATTCCTTCCCCTTCTGCACCTGTTAGAGTAAGGGAGGGGCATGAGGGGGTGGGACCTGCACAAGGTGCAGCTGATAGAAATGCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | AAGTCCCACCCTTCTTGCGATCGAGGCCAGCAACATTGGTGTTCATaGTGTCAGCCAAGGATGGAAGCTCCAAATCGCTCACTGCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: KSHPSCDRGQQHWCS*CQPRMEAPNRSLPR Trigger: TCTGGGCAGTGAGCGATTTGGAGCTTCCATCCTTGGCTGACATCATGAACACCAATGTTGCTGGCCTCGATCGCAAGAAGGGTGGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | TCCCATAAGAAGAGCCCCTCCCGGCAGACAAAACCCTCTCATGTGTaGCTCAACCACGCCATAAGAGAGGCTCAGGTGAGGAGGTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: SHKKSPSRQTKPSHV*LNHAIREAQVRRFN Trigger: GTTAAACCTCCTCACCTGAGCCTCTCTTATGGCGTGGTTGAGTCACACATGAGAGGGTTTTGTCTGCCGGGAGGGGCTCTTCTTATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 90 bp | ACGGGAGACTTCACAGGCCTCTGCTGGGAGCTCGCTTGTTTATTTTaGAAGAATTGTTTGTCTCTGCTGCTGACAGTGCAGCCTGAATCC | + |
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Preference number: 5 (lower is better) Translates to: TGDFTGLCWELACLF*KNCLSLLLTVQPES Trigger: GGATTCAGGCTGCACTGTCAGCAGCAGAGACAAACAATTCTTCCAAAATAAACAAGCGAGCTCCCAGCAGAGGCCTGTGAAGTCTCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 90 bp | TCTCCGGATAAGACACGTTTGTCTTTTTCCCAGGCACACAGCCTTTaGCGTTTCAGAGCCAGGGCTTTTCCTGAAGACTGCATTTCTATC | + |
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Preference number: 5 (lower is better) Translates to: SPDKTRLSFSQAHSL*RFRARAFPEDCISI Trigger: GATAGAAATGCAGTCTTCAGGAAAAGCCCTGGCTCTGAAACGGCAAAGGCTGTGTGCCTGGGAAAAAGACAAACGTGTCTTATCCGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | GTCAGCCAAGGATGGAAGCTCCAAATCGCTCACTGCCCAGACTTGTaGAAACTAAATGGCTGCCCTTTTCCTTGGAACCTCTTTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: VSQGWKLQIAHCPDL*KLNGCPFPWNLFSE Trigger: TTCAGAAAAGAGGTTCCAAGGAAAAGGGCAGCCATTTAGTTTTCACAAGTCTGGGCAGTGAGCGATTTGGAGCTTCCATCCTTGGCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 90 bp | CTGCCCTCATCTGCTGACCGCCTGACTGCACTAAGCAGCATTAGATaGCATTTTTCCGTCACTGAATTTTTAGGTCAAGCCAGTTCTATC | + |
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Preference number: 5 (lower is better) Translates to: LPSSADRLTALSSIR*HFSVTEFLGQASSI Trigger: GATAGAACTGGCTTGACCTAAAAATTCAGTGACGGAAAAATGTCATCTAATGCTGCTTAGTGCAGTCAGGCGGTCAGCAGATGAGGGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CAA 72 bp | AGGACGGCCGGTGGCCTGGGTCTCACACTCGGCCACTaGAGTTCCCCGTGGGCCTCTGCAGCCTCCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RTAGGLGLTLGH*SSPWASAASSV Trigger: CACAGAGGAGGCTGCAGAGGCCCACGGGGAACTCAAGTGGCCGAGTGTGAGACCCAGGCCACCGGCCGTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | ACGCTGCAGCCTCCCGGGGGTGCAGCCAGTGGGGGATaGACAGACCCGTGGTCCTCCACACAGAGGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TLQPPGGAASGG*TDPWSSTQRSA Trigger: TGCTGACCTCTGTGTGGAGGACCACGGGTCTGTTCATCCCCCACTGGCTGCACCCCCGGGAGGCTGCAGCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | CCACTGGGAGGCTCGCCGAAAGCCATCCAAGAGGTCTaGGCTCCTCTGAGGCTGACTCGAGGGGGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PLGGSPKAIQEV*APLRLTRGGCP Trigger: TGGGCAGCCCCCTCGAGTCAGCCTCAGAGGAGCCCAGACCTCTTGGATGGCTTTCGGCGAGCCTCCCAGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | ACGGCCTCTCGAGCTGCGGGGCAAGGCCTCCAGTCCTaGGTCTTGTGTTTGGGGAGCACGTCAGCTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TASRAAGQGLQS*VLCLGSTSASR Trigger: CCTGGAAGCTGACGTGCTCCCCAAACACAAGACGCAGGACTGGAGGCCTTGCCCCGCAGCTCGAGAGGCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | GTCCATGCAGTGTCCGGTGGCGAGTGCTGTGCCCACTaGGAGGCTCGCCGAAAGCCATCCAAGAGGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VHAVSGGECCAH*EARRKPSKRSG Trigger: CCCAGACCTCTTGGATGGCTTTCGGCGAGCCTCCCAGTGGGCACAGCACTCGCCACCGGACACTGCATGGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | ATAGTGCACGCTGCAGCCTCCCGGGGGTGCAGCCAGTaGGGGATGAACAGACCCGTGGTCCTCCACACAGAG | + |
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Preference number: 6 (lower is better) Translates to: IVHAAASRGCSQ*GMNRPVVLHTE Trigger: CTCTGTGTGGAGGACCACGGGTCTGTTCATCCCCCACTGGCTGCACCCCCGGGAGGCTGCAGCGTGCACTAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CAA 90 bp | GCCTCTCGAGCTGCGGGGCAAGGCCTCCAGTCCTGCGTCTTGTGTTaGGGGAGCACGTCAGCTTCCAGGGCAGCAAACTCGCGGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASRAAGQGLQSCVLC*GSTSASRAANSRCF Trigger: GAAGCACCGCGAGTTTGCTGCCCTGGAAGCTGACGTGCTCCCCAAACACAAGACGCAGGACTGGAGGCCTTGCCCCGCAGCTCGAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | GCAAGGACCAGGCCATACCCATCGCAGTGTGGAAGCTaGGTCCATGCAGTGTCCGGTGGCGAGTGCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ARTRPYPSQCGS*VHAVSGGECCA Trigger: GGCACAGCACTCGCCACCGGACACTGCATGGACTCAGCTTCCACACTGCGATGGGTATGGCCTGGTCCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | CCCCGTCCAGGACCCTCACCGACTGCCTACAGCCACTaGAGGGTAGAAGGGACCCGAACTTGGTCGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PRPGPSPTAYSH*RVEGTRTWSKR Trigger: CCTCTTCGACCAAGTTCGGGTCCCTTCTACCCTTCAGTGGCTGTAGGCAGTCGGTGAGGGTCCTGGACGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | GTCCCTCCCTGGAGGGACCTCCCCCACATGAAACCCTaGTCCAGAAGCATGGGTGGTCTCAGCCTGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: VPPWRDLPHMKP*SRSMGGLSLHS Trigger: GGAATGCAGGCTGAGACCACCCATGCTTCTGGAGCAGGGTTTCATGTGGGGGAGGTCCCTCCAGGGAGGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | CAGGCCATACCCATCGCAGTGTGGAAGCTGAGTCCATaGAGTGTCCGGTGGCGAGTGCTGTGCCCACTGGGA | + |
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Preference number: 6 (lower is better) Translates to: QAIPIAVWKLSP*SVRWRVLCPLG Trigger: TCCCAGTGGGCACAGCACTCGCCACCGGACACTGCATGGACTCAGCTTCCACACTGCGATGGGTATGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | ATCGCAGTGTGGAAGCTGAGTCCATGCAGTGTCCGGTaGCGAGTGCTGTGCCCACTGGGAGGCTCGCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: IAVWKLSPCSVR*RVLCPLGGSPK Trigger: TTTCGGCGAGCCTCCCAGTGGGCACAGCACTCGCCACCGGACACTGCATGGACTCAGCTTCCACACTGCGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | ACCCCAAGGACACAGTCGGGTGACCGGTTATCACCCTaGACACAGGAGGCATCCACACAGAGACGGGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: TPRTQSGDRLSP*TQEASTQRRVD Trigger: GTCCACCCGTCTCTGTGTGGATGCCTCCTGTGTCCAGGGTGATAACCGGTCACCCGACTGTGTCCTTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | GGAGAAGCCAGGAATGACCCCAAGGACACAGTCGGGTaGCCGGTTATCACCCTGGACACAGGAGGCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: GEARNDPKDTVG*PVITLDTGGIH Trigger: GTGGATGCCTCCTGTGTCCAGGGTGATAACCGGTCACCCGACTGTGTCCTTGGGGTCATTCCTGGCTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | GGGACACTCAGACGTGATAGAGTCCAGACACATCCCTaGGAGCCACACCACACACCTCGCGCCCCTGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: GTLRRDRVQTHP*EPHHTPRAPVV Trigger: GACAACAGGGGCGCGAGGTGTGTGGTGTGGCTCTCAGGGATGTGTCTGGACTCTATCACGTCTGAGTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | TGTGTCCTCCTGGCCCTTTCCATGAACCTTTTGTTCTaGCAGGGAGGACGGCCGGTGGCCTGGGTCTCACAC | + |
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Preference number: 6 (lower is better) Translates to: CVLLALSMNLLF*QGGRPVAWVSH Trigger: GTGTGAGACCCAGGCCACCGGCCGTCCTCCCTGTCAGAACAAAAGGTTCATGGAAAGGGCCAGGAGGACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | TCGGTTCCCCTTGCTGTGTCCTCCTGGCCCTTTCCATaGACCTTTTGTTCTGACAGGGAGGACGGCCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SVPLAVSSWPFP*TFCSDREDGRW Trigger: CCACCGGCCGTCCTCCCTGTCAGAACAAAAGGTTCATGGAAAGGGCCAGGAGGACACAGCAAGGGGAACCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | AGGTACAGACCCATGACTGTCACTCCAGGTCTGCCGTaGGCCACTCCAGTTCACCGGCCAGCACCCCATCTT | + |
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Preference number: 6 (lower is better) Translates to: RYRPMTVTPGLP*ATPVHRPAPHL Trigger: AAGATGGGGTGCTGGCCGGTGAACTGGAGTGGCTCACGGCAGACCTGGAGTGACAGTCATGGGTCTGTACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | CCTCCCCCACATGAAACCCTGCTCCAGAAGCATGGGTaGTCTCAGCCTGCATTCCCCAGGGAGAATGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PPPHETLLQKHG*SQPAFPRENEV Trigger: GACCTCATTCTCCCTGGGGAATGCAGGCTGAGACCACCCATGCTTCTGGAGCAGGGTTTCATGTGGGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | GAGGTCTGGGCTCCTCTGAGGCTGACTCGAGGGGGCTaGCCAGACAGAAAATCCTGGCCTTGCGATTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: EVWAPLRLTRGG*PDRKSWPCDFN Trigger: ATTGAAATCGCAAGGCCAGGATTTTCTGTCTGGGCAGCCCCCTCGAGTCAGCCTCAGAGGAGCCCAGACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | CTCTCAGTGGCTCCTCTCCTTCCAGCCAATGTGCAATaGAGTCCAGCTCAGTCTCTGCAAGCCCAGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: LSVAPLLPANVQ*SPAQSLQAQPW Trigger: CCATGGCTGGGCTTGCAGAGACTGAGCTGGACTGCATTGCACATTGGCTGGAAGGAGAGGAGCCACTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CAA 72 bp | GTCAGCCAGGTCCTGTGTCGCTTAAGCCTTCCTTCCTaGATATGTCCCAAAACGGCCTCTCGAGCTGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: VSQVLCRLSLPS*ICPKTASRAAG Trigger: CCCCGCAGCTCGAGAGGCCGTTTTGGGACATATCAAGGAAGGAAGGCTTAAGCGACACAGGACCTGGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | CGGCAATTAAAGCCGAATCCAGGGCTCCTTAGCATATaGATTGAGGCGCATCGGAGCCCTCACTGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RQLKPNPGLLSI*IEAHRSPHCWA Trigger: GGCCCAGCAGTGAGGGCTCCGATGCGCCTCAATTCATATGCTAAGGAGCCCTGGATTCGGCTTTAATTGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | AAGAGCCCCTCCCGGCAGACAAAACCCTCTCATGTGTaGCTCAACCACGCCATAAGAGAGGCTCAGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KSPSRQTKPSHV*LNHAIREAQVR Trigger: CCTCACCTGAGCCTCTCTTATGGCGTGGTTGAGTCACACATGAGAGGGTTTTGTCTGCCGGGAGGGGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | TCCTTCCTTGATATGTCCCAAAACGGCCTCTCGAGCTaGGGGGCAAGGCCTCCAGTCCTGCGTCTTGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SFLDMSQNGLSS*GARPPVLRLVF Trigger: AAACACAAGACGCAGGACTGGAGGCCTTGCCCCGCAGCTCGAGAGGCCGTTTTGGGACATATCAAGGAAGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | AGGCTGACTCGAGGGGGCTGCCCAGACAGAAAATCCTaGCCTTGCGATTTCAATCTCAGACCAACCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: RLTRGGCPDRKS*PCDFNLRPTHL Trigger: CAGGTGGGTTGGTCTGAGATTGAAATCGCAAGGCCAGGATTTTCTGTCTGGGCAGCCCCCTCGAGTCAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | CAAAGGCCCCAGTGTTACGTGAAGCACATTTCACAGTaGAAATCACGCCTCATGGGGCCAGCCCGCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: QRPQCYVKHISQ*KSRLMGPARST Trigger: AGTGGAGCGGGCTGGCCCCATGAGGCGTGATTTTCACTGTGAAATGTGCTTCACGTAACACTGGGGCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | GTGGACGTGGGGAATGAGGAGGAGACACGGCAAGCTTaGGACCAAAGGAAAAAGAGGCTGACCTTGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VDVGNEEETRQA*DQRKKRLTLKP Trigger: AGGCTTCAAGGTCAGCCTCTTTTTCCTTTGGTCCCAAGCTTGCCGTGTCTCCTCCTCATTCCCCACGTCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | TTTCCTGAAGACTGCATTTCTATCAGCTGCACCTTGTaGAGGTCCCACCCCCTCATGCCCCTCCCTTACTCT | + |
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Preference number: 6 (lower is better) Translates to: FPEDCISISCTL*RSHPLMPLPYS Trigger: AGAGTAAGGGAGGGGCATGAGGGGGTGGGACCTGCACAAGGTGCAGCTGATAGAAATGCAGTCTTCAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | AGTTTGACAGAGACGTGGGCTGACCTGAGGGAGTCATaGGCAGCAAGGCCAGTGACAAGGCAGATACAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SLTETWADLRES*AARPVTRQIQE Trigger: TTCTTGTATCTGCCTTGTCACTGGCCTTGCTGCCCATGACTCCCTCAGGTCAGCCCACGTCTCTGTCAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CAA 72 bp | GAAGTCCCACCCTTCTTGCGATCGAGGCCAGCAACATaGGTGTTCATGATGTCAGCCAAGGATGGAAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: EVPPFLRSRPAT*VFMMSAKDGSS Trigger: GGAGCTTCCATCCTTGGCTGACATCATGAACACCAATGTTGCTGGCCTCGATCGCAAGAAGGGTGGGACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CAA 72 bp | TTCCCCAGGAAGGCTAAGCACGAAGTCCCACCCTTCTaGCGATCGAGGCCAGCAACATTGGTGTTCATGATG | + |
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Preference number: 6 (lower is better) Translates to: FPRKAKHEVPPF*RSRPATLVFMM Trigger: CATCATGAACACCAATGTTGCTGGCCTCGATCGCAAGAAGGGTGGGACTTCGTGCTTAGCCTTCCTGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CAA 90 bp | GCTAAGCACGAAGTCCCACCCTTCTTGCGATCGAGGCCAGCAACATaGGTGTTCATGATGTCAGCCAAGGATGGAAGCTCCAAATCGCTC | + |
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Preference number: 6 (lower is better) Translates to: AKHEVPPFLRSRPAT*VFMMSAKDGSSKSL Trigger: GAGCGATTTGGAGCTTCCATCCTTGGCTGACATCATGAACACCAATGTTGCTGGCCTCGATCGCAAGAAGGGTGGGACTTCGTGCTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | TGGCCTTGCGATTTCAATCTCAGACCAACCCACCTGTaGACACTGCCTTCTCATGTGGACGTGGGGAATGAG | + |
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Preference number: 6 (lower is better) Translates to: WPCDFNLRPTHL*TLPSHVDVGNE Trigger: CTCATTCCCCACGTCCACATGAGAAGGCAGTGTTCACAGGTGGGTTGGTCTGAGATTGAAATCGCAAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | GCGATTTCAATCTCAGACCAACCCACCTGTGAACACTaGCTTCTCATGTGGACGTGGGGAATGAGGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: AISISDQPTCEH*LLMWTWGMRRR Trigger: TCTCCTCCTCATTCCCCACGTCCACATGAGAAGGCAGTGTTCACAGGTGGGTTGGTCTGAGATTGAAATCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | CTTTGCCGTTTCAGAGCCAGGGCTTTTCCTGAAGACTaGATTTCTATCAGCTGCACCTTGTGCAGGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LCRFRARAFPED*ISISCTLCRSH Trigger: GTGGGACCTGCACAAGGTGCAGCTGATAGAAATGCAGTCTTCAGGAAAAGCCCTGGCTCTGAAACGGCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CAA 72 bp | ATTTACAGGCTGCGCAGAATTGCGGAGGATGAAAGTTaGACAGAGACGTGGGCTGACCTGAGGGAGTCATGG | + |
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Preference number: 6 (lower is better) Translates to: IYRLRRIAEDES*TETWADLRESW Trigger: CCATGACTCCCTCAGGTCAGCCCACGTCTCTGTCAAACTTTCATCCTCCGCAATTCTGCGCAGCCTGTAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CAA 90 bp | TTTTTAAGCATTTACAGGCTGCGCAGAATTGCGGAGGATGAAAGTTaGACAGAGACGTGGGCTGACCTGAGGGAGTCATGGGCAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: FLSIYRLRRIAEDES*TETWADLRESWAAR Trigger: CCTTGCTGCCCATGACTCCCTCAGGTCAGCCCACGTCTCTGTCAAACTTTCATCCTCCGCAATTCTGCGCAGCCTGTAAATGCTTAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | CAGTGTTCACAGAGGGTCTCAAACCCTGCAGGACCCTaGAATTGTCTGGGATCCACACCAGTCGGAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: QCSQRVSNPAGP*NCLGSTPVGRK Trigger: TTTTCTTCCGACTGGTGTGGATCCCAGACAATTTCAGGGTCCTGCAGGGTTTGAGACCCTCTGTGAACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | CCTTCTTGCGATCGAGGCCAGCAACATTGGTGTTCATaGTGTCAGCCAAGGATGGAAGCTCCAAATCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSCDRGQQHWCS*CQPRMEAPNRS Trigger: TGAGCGATTTGGAGCTTCCATCCTTGGCTGACATCATGAACACCAATGTTGCTGGCCTCGATCGCAAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | CTTAGACTATGGTACAAAAGATCCAAGAAATGCCAGTaGCATTCGGTTCCCCTTGCTGTGTCCTCCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LRLWYKRSKKCQ*HSVPLAVSSWP Trigger: GGGCCAGGAGGACACAGCAAGGGGAACCGAATGCCACTGGCATTTCTTGGATCTTTTGTACCATAGTCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS TCA 72 bp | GGATGGAAGCTCCAAATCGCTCACTGCCCAGACTTGTaGAAACTAAATGGCTGCCCTTTTCCTTGGAACCTC | + |
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Preference number: 6 (lower is better) Translates to: GWKLQIAHCPDL*KLNGCPFPWNL Trigger: GAGGTTCCAAGGAAAAGGGCAGCCATTTAGTTTTCACAAGTCTGGGCAGTGAGCGATTTGGAGCTTCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | CCTGGCCTTTTGGTGCAATCTTATCAGGAATGCGTGTaGCCTGTTTTTCCTCAGACACTCCACAGGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: PGLLVQSYQECV*PVFPQTLHRNV Trigger: CACATTCCTGTGGAGTGTCTGAGGAAAAACAGGGCACACGCATTCCTGATAAGATTGCACCAAAAGGCCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS GCA 72 bp | TGTGGTTTGGGCAGAACGGGAGACTTCACAGGCCTCTaGTGGGAGCTCGCTTGTTTATTTTGGAAGAATTGT | + |
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Preference number: 6 (lower is better) Translates to: CGLGRTGDFTGL*WELACLFWKNC Trigger: ACAATTCTTCCAAAATAAACAAGCGAGCTCCCAGCAGAGGCCTGTGAAGTCTCCCGTTCTGCCCAAACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | GGTTTGGGCAGAACGGGAGACTTCACAGGCCTCTGCTaGGAGCTCGCTTGTTTATTTTGGAAGAATTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GLGRTGDFTGLC*ELACLFWKNCL Trigger: CAAACAATTCTTCCAAAATAAACAAGCGAGCTCCCAGCAGAGGCCTGTGAAGTCTCCCGTTCTGCCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CCA 72 bp | GAGTTTCCGTTTGGGAAGACGAAGAAGCTCTGTGGGTaGAAGGTGGTGATGATGAACACACTTAATGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: EFPFGKTKKLCG*KVVMMNTLNAS Trigger: GGAGGCATTAAGTGTGTTCATCATCACCACCTTCCACCCACAGAGCTTCTTCGTCTTCCCAAACGGAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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| CDS CAA 90 bp | ACAGGCCTCTGCTGGGAGCTCGCTTGTTTATTTTGGAAGAATTGTTaGTCTCTGCTGCTGACAGTGCAGCCTGAATCCTGTTTTGTTATT | + |
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Preference number: 6 (lower is better) Translates to: TGLCWELACLFWKNC*SLLLTVQPESCFVI Trigger: AATAACAAAACAGGATTCAGGCTGCACTGTCAGCAGCAGAGACAAACAATTCTTCCAAAATAAACAAGCGAGCTCCCAGCAGAGGCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609107.1 |
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