Pregenerated sensors for LINC02535 (Homo sapiens)
Ensembl gene IDs: ENSG00000234155Ensembl transcript IDs: ENST00000455071.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTAGGAGATTGGGATCCTTGTTCTGACTGTGCCACTACAGAGCTGTaGGAACTTCAGCAAGTTCTTTCATCCCTGTGGTCTGAATGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGDWDPCSDCATTEL*ELQQVLSSLWSEWK Trigger: TTTCCATTCAGACCACAGGGATGAAAGAACTTGCTGAAGTTCTCACAGCTCTGTAGTGGCACAGTCAGAACAAGGATCCCAATCTCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CCA 90 bp | CAGCATTGGCTGCTTCAGCTACTCCACTTTTCAGATGAAAAGTTGTaGGCAAGACTTAAGCAGCAACTTGCTTTGAATGGTTGTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QHWLLQLLHFSDEKL*ARLKQQLALNGCGT Trigger: TGTGCCACAACCATTCAAAGCAAGTTGCTGCTTAAGTCTTGCCCACAACTTTTCATCTGAAAAGTGGAGTAGCTGAAGCAGCCAATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS TCA 90 bp | CCTTTTAGTCCAAATGCAAATTATGAACATGAGCATGAGCATAAATaGGCAGCTGCTGTCTATTCACCCCACTGGACTGTGGCAAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PFSPNANYEHEHEHK*AAAVYSPHWTVAKC Trigger: GCACTTTGCCACAGTCCAGTGGGGTGAATAGACAGCAGCTGCTCATTTATGCTCATGCTCATGTTCATAATTTGCATTTGGACTAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS TCA 90 bp | TACAGAGCTGTGAGAACTTCAGCAAGTTCTTTCATCCCTGTGGTCTaGATGGAAAATGAGGGAGTGAGACTAAATGATTTCCCAGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: YRAVRTSASSFIPVV*MENEGVRLNDFPDP Trigger: GGGATCTGGGAAATCATTTAGTCTCACTCCCTCATTTTCCATTCAGACCACAGGGATGAAAGAACTTGCTGAAGTTCTCACAGCTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS GCA 90 bp | GTTCTTACTGTTGCATCCTCAAGAATTATAACCACCAGCATTGGCTaGTTCAGCTACTCCACTTTTCAGATGAAAAGTTGTGGGCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLTVASSRIITTSIG*FSYSTFQMKSCGQD Trigger: GTCTTGCCCACAACTTTTCATCTGAAAAGTGGAGTAGCTGAAGCAGCCAATGCTGGTGGTTATAATTCTTGAGGATGCAACAGTAAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CCA 90 bp | TTCCGTTCTTACTGTTGCATCCTCAAGAATTATAACCACCAGCATTaGCTGCTTCAGCTACTCCACTTTTCAGATGAAAAGTTGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FRSYCCILKNYNHQH*LLQLLHFSDEKLWA Trigger: TGCCCACAACTTTTCATCTGAAAAGTGGAGTAGCTGAAGCAGCCAATGCTGGTGGTTATAATTCTTGAGGATGCAACAGTAAGAACGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS TCA 90 bp | TTTCAGATGAAAAGTTGTGGGCAAGACTTAAGCAGCAACTTGCTTTaGATGGTTGTGGCACATTTGCACATGCTGTTTCTTCTGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FQMKSCGQDLSSNLL*MVVAHLHMLFLLSK Trigger: TTTGCTCAGAAGAAACAGCATGTGCAAATGTGCCACAACCATTCAAAGCAAGTTGCTGCTTAAGTCTTGCCCACAACTTTTCATCTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CCA 90 bp | AATTCTGAGTTGGCATTTGGTTTAGATTTAGCTAGAAGTTTCTTCTaGTCTTGCCTAGAGTCACTCACAAATTGCAGTCGTCTAAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NSELAFGLDLARSFF*SCLESLTNCSRLKV Trigger: AACTTTTAGACGACTGCAATTTGTGAGTGACTCTAGGCAAGACCAGAAGAAACTTCTAGCTAAATCTAAACCAAATGCCAACTCAGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CAA 72 bp | CAGCTCTCAGTCTGGATGCCTCTATGTAGGGCGCTTTaGATTTCGCTGTCTGTGATGGACTCCTGTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QLSVWMPLCRAL*ISLSVMDSCSC Trigger: ACAGGAACAGGAGTCCATCACAGACAGCGAAATCAAAAGCGCCCTACATAGAGGCATCCAGACTGAGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS TCA 72 bp | TGGGATCCTTGTTCTGACTGTGCCACTACAGAGCTGTaGGAACTTCAGCAAGTTCTTTCATCCCTGTGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WDPCSDCATTEL*ELQQVLSSLWS Trigger: AGACCACAGGGATGAAAGAACTTGCTGAAGTTCTCACAGCTCTGTAGTGGCACAGTCAGAACAAGGATCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CAA 90 bp | TCGGCCACACTCAATTACAGCACGAAGAAGTTGCCCAGTAAACACTaGTCTGAAGGATACATGTCCTTAGTTGCAAAGGCTTCGGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SATLNYSTKKLPSKH*SEGYMSLVAKASGV Trigger: AACCCCCGAAGCCTTTGCAACTAAGGACATGTATCCTTCAGACAAGTGTTTACTGGGCAACTTCTTCGTGCTGTAATTGAGTGTGGCCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CAA 90 bp | CACCAGCATTGGCTGCTTCAGCTACTCCACTTTTCAGATGAAAAGTaGTGGGCAAGACTTAAGCAGCAACTTGCTTTGAATGGTTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HQHWLLQLLHFSDEK*WARLKQQLALNGCG Trigger: GCCACAACCATTCAAAGCAAGTTGCTGCTTAAGTCTTGCCCACAACTTTTCATCTGAAAAGTGGAGTAGCTGAAGCAGCCAATGCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS GCA 72 bp | AGTTTCTTCTGGTCTTGCCTAGAGTCACTCACAAATTaGAGTCGTCTAAAAGTTCACCTGGGCAGCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SFFWSCLESLTN*SRLKVHLGSMV Trigger: GACCATGCTGCCCAGGTGAACTTTTAGACGACTGCAATTTGTGAGTGACTCTAGGCAAGACCAGAAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CCA 72 bp | CTAAATGATTTCCCAGATCCCTTTCAGCTCTCAGTCTaGATGCCTCTATGTAGGGCGCTTTTGATTTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LNDFPDPFQLSV*MPLCRALLISL Trigger: CAGCGAAATCAAAAGCGCCCTACATAGAGGCATCCAGACTGAGAGCTGAAAGGGATCTGGGAAATCATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS GCA 72 bp | CCACAACCAGCCTTGAACCATCTTACCCATGTTTTGTaGTTAGTACCAAGAACACTAAAGGACTACCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: PQPALNHLTHVL*LVPRTLKDYPT Trigger: GGTTGGGTAGTCCTTTAGTGTTCTTGGTACTAAGCACAAAACATGGGTAAGATGGTTCAAGGCTGGTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CAA 72 bp | AAGTTTCTTCTGGTCTTGCCTAGAGTCACTCACAAATaGCAGTCGTCTAAAAGTTCACCTGGGCAGCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: KFLLVLPRVTHK*QSSKSSPGQHG Trigger: ACCATGCTGCCCAGGTGAACTTTTAGACGACTGCAATTTGTGAGTGACTCTAGGCAAGACCAGAAGAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CAA 90 bp | ATAGCCTTGAATGTTGAAGGCTGCATTTCATTTCTCTGCATTCTATaGGTCAAGCAAGTTACAAGCCCAGCCCATATTCAAGGGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IALNVEGCISFLCIL*VKQVTSPAHIQGGG Trigger: TCCTCCCCCTTGAATATGGGCTGGGCTTGTAACTTGCTTGACCAATAGAATGCAGAGAAATGAAATGCAGCCTTCAACATTCAAGGCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS TCA 72 bp | CCAAATGCAAATTATGAACATGAGCATGAGCATAAATaGGCAGCTGCTGTCTATTCACCCCACTGGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PNANYEHEHEHK*AAAVYSPHWTV Trigger: CACAGTCCAGTGGGGTGAATAGACAGCAGCTGCTCATTTATGCTCATGCTCATGTTCATAATTTGCATTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CCA 72 bp | CTGCTTCAGCTACTCCACTTTTCAGATGAAAAGTTGTaGGCAAGACTTAAGCAGCAACTTGCTTTGAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLQLLHFSDEKL*ARLKQQLALNG Trigger: ACCATTCAAAGCAAGTTGCTGCTTAAGTCTTGCCCACAACTTTTCATCTGAAAAGTGGAGTAGCTGAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CAA 72 bp | AGCATATCCACAGGGTTAGACTCCTTGAGCATAGCCTaGAATGTTGAAGGCTGCATTTCATTTCTCTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: SISTGLDSLSIA*NVEGCISFLCI Trigger: AATGCAGAGAAATGAAATGCAGCCTTCAACATTCAAGGCTATGCTCAAGGAGTCTAACCCTGTGGATATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CAA 72 bp | TCATTTGACAACAGCATATCCACAGGGTTAGACTCCTaGAGCATAGCCTTGAATGTTGAAGGCTGCATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SFDNSISTGLDS*SIALNVEGCIS Trigger: TGAAATGCAGCCTTCAACATTCAAGGCTATGCTCAAGGAGTCTAACCCTGTGGATATGCTGTTGTCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CAA 90 bp | TTTGACAACAGCATATCCACAGGGTTAGACTCCTTGAGCATAGCCTaGAATGTTGAAGGCTGCATTTCATTTCTCTGCATTCTATTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FDNSISTGLDSLSIA*NVEGCISFLCILLV Trigger: GACCAATAGAATGCAGAGAAATGAAATGCAGCCTTCAACATTCAAGGCTATGCTCAAGGAGTCTAACCCTGTGGATATGCTGTTGTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS TCA 72 bp | AAAAGTTGTGGGCAAGACTTAAGCAGCAACTTGCTTTaGATGGTTGTGGCACATTTGCACATGCTGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KSCGQDLSSNLL*MVVAHLHMLFL Trigger: AAGAAACAGCATGTGCAAATGTGCCACAACCATTCAAAGCAAGTTGCTGCTTAAGTCTTGCCCACAACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS TCA 72 bp | GTGAGAACTTCAGCAAGTTCTTTCATCCCTGTGGTCTaGATGGAAAATGAGGGAGTGAGACTAAATGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: VRTSASSFIPVV*MENEGVRLNDF Trigger: GAAATCATTTAGTCTCACTCCCTCATTTTCCATTCAGACCACAGGGATGAAAGAACTTGCTGAAGTTCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS GCA 72 bp | GTTGCATCCTCAAGAATTATAACCACCAGCATTGGCTaGTTCAGCTACTCCACTTTTCAGATGAAAAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VASSRIITTSIG*FSYSTFQMKSC Trigger: ACAACTTTTCATCTGAAAAGTGGAGTAGCTGAAGCAGCCAATGCTGGTGGTTATAATTCTTGAGGATGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CAA 90 bp | TTTTCAGATGAAAAGTTGTGGGCAAGACTTAAGCAGCAACTTGCTTaGAATGGTTGTGGCACATTTGCACATGCTGTTTCTTCTGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: FSDEKLWARLKQQLA*NGCGTFAHAVSSEQ Trigger: TTGCTCAGAAGAAACAGCATGTGCAAATGTGCCACAACCATTCAAAGCAAGTTGCTGCTTAAGTCTTGCCCACAACTTTTCATCTGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS CCA 72 bp | TTGGCATTTGGTTTAGATTTAGCTAGAAGTTTCTTCTaGTCTTGCCTAGAGTCACTCACAAATTGCAGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: LAFGLDLARSFF*SCLESLTNCSR Trigger: ACGACTGCAATTTGTGAGTGACTCTAGGCAAGACCAGAAGAAACTTCTAGCTAAATCTAAACCAAATGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS GCA 72 bp | TTTGGTTTAGATTTAGCTAGAAGTTTCTTCTGGTCTTaGCTAGAGTCACTCACAAATTGCAGTCGTCTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FGLDLARSFFWS*LESLTNCSRLK Trigger: TTTTAGACGACTGCAATTTGTGAGTGACTCTAGGCAAGACCAGAAGAAACTTCTAGCTAAATCTAAACCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS GCA 72 bp | GCCATTCCTTCTGCTTTAAAGATACATGTCCTTAGTTaGAAAAGGAGGAGAAACTGCTCTAATATCTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: AIPSALKIHVLS*KRRRNCSNISN Trigger: ATTTGAGATATTAGAGCAGTTTCTCCTCCTTTTGCAACTAAGGACATGTATCTTTAAAGCAGAAGGAATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||
| CDS TCA 72 bp | AACAGCATGAATGAATACCACAGACATTATCCTTTGTaGAAAAGTCAGACACTACTAGTGAGTACATTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NSMNEYHRHYPL*KSQTLLVSTFC Trigger: ACAGAATGTACTCACTAGTAGTGTCTGACTTTTTCACAAAGGATAATGTCTGTGGTATTCATTCATGCTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455071.1 |
||