Pregenerated sensors for LINC02530 (Homo sapiens)
Ensembl gene IDs: ENSG00000234015Ensembl transcript IDs: ENST00000457945.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGTTCAATTGCATTGTTAGAGTTAAATAACATTGCTTTGAAGCCATaGACATATGGATTAAAATGCAGACTCTGCTGCTTGCTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSIALLELNNIALKP*TYGLKCRLCCLLAL Trigger: CAGAGCCAGCAAGCAGCAGAGTCTGCATTTTAATCCATATGTTCATGGCTTCAAAGCAATGTTATTTAACTCTAACAATGCAATTGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457945.1 |
||
| CDS GCA 72 bp | ACAATGCAAGGAAAACAGGATTTGCACGGCTCCGACTaGACTGGCCCAAGAATTCCAGGAAGTGATTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: TMQGKQDLHGSD*TGPRIPGSDCT Trigger: AGTACAATCACTTCCTGGAATTCTTGGGCCAGTGCAGTCGGAGCCGTGCAAATCCTGTTTTCCTTGCATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457945.1 |
||
| CDS GCA 72 bp | ATGCTGTATTGTTTATCAGCCCAGGCAGTTGAAAGGTaGGATATTCCAATCTTGTGGTTCAGGATGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: MLYCLSAQAVER*DIPILWFRMAL Trigger: CAGTGCCATCCTGAACCACAAGATTGGAATATCGCACCTTTCAACTGCCTGGGCTGATAAACAATACAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457945.1 |
||
| CDS CAA 90 bp | TTTATGAAGCTGAGTACATGCTGTATTGTTTATCAGCCCAGGCAGTaGAAAGGTGCGATATTCCAATCTTGTGGTTCAGGATGGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: FMKLSTCCIVYQPRQ*KGAIFQSCGSGWHW Trigger: CCAGTGCCATCCTGAACCACAAGATTGGAATATCGCACCTTTCAACTGCCTGGGCTGATAAACAATACAGCATGTACTCAGCTTCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457945.1 |
||
| CDS CAA 72 bp | CTGAGTACATGCTGTATTGTTTATCAGCCCAGGCAGTaGAAAGGTGCGATATTCCAATCTTGTGGTTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSTCCIVYQPRQ*KGAIFQSCGSG Trigger: TCCTGAACCACAAGATTGGAATATCGCACCTTTCAACTGCCTGGGCTGATAAACAATACAGCATGTACTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457945.1 |
||