Pregenerated sensors for LINC02529 (Homo sapiens)
Ensembl gene IDs: ENSG00000234777Ensembl transcript IDs: ENST00000429657.2, ENST00000649001.1, ENST00000654094.1, ENST00000654710.1, ENST00000655999.1, ENST00000656716.1, ENST00000666781.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGTCCAGTCCCTGGCACAGAGAAAGCTTGGGATGGCTTGAGGGGATaGAGTGGGCTAAAGACAGTCTTCTCCTTCCAATGGAAACCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RPVPGTEKAWDGLRG*SGLKTVFSFQWKPP Trigger: AGGAGGTTTCCATTGGAAGGAGAAGACTGTCTTTAGCCCACTGCATCCCCTCAAGCCATCCCAAGCTTTCTCTGTGCCAGGGACTGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000429657.2 ENST00000649001.1 ENST00000654710.1 ENST00000655999.1 ENST00000656716.1 ENST00000666781.1 |
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| CDS GCA 90 bp | CGTCCAGTCCCTGGCACAGAGAAAGCTTGGGATGGCTTGAGGGGATaGAGTGGGCTAAAGACAGTCTTCTCCTTCCAATGGAAACCTGTC | + |
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Preference number: 5 (lower is better) Translates to: RPVPGTEKAWDGLRG*SGLKTVFSFQWKPV Trigger: GACAGGTTTCCATTGGAAGGAGAAGACTGTCTTTAGCCCACTGCATCCCCTCAAGCCATCCCAAGCTTTCTCTGTGCCAGGGACTGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654094.1 |
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| CDS CCA 90 bp | GGTTCGTATTTTAGCGTGCGTCCAGTCCCTGGCACAGAGAAAGCTTaGGATGGCTTGAGGGGATGCAGTGGGCTAAAGACAGTCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GSYFSVRPVPGTEKA*DGLRGCSGLKTVFS Trigger: GGAGAAGACTGTCTTTAGCCCACTGCATCCCCTCAAGCCATCCCAAGCTTTCTCTGTGCCAGGGACTGGACGCACGCTAAAATACGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000429657.2 ENST00000649001.1 ENST00000654094.1 ENST00000654710.1 ENST00000655999.1 ENST00000656716.1 ENST00000666781.1 |
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| CDS CCA 90 bp | AGACCATTCAGCCGTGATTCCTCTCGGCCCTACGCTGTCCTTCCCTaGGGTGGAACACACACTTGGTTAACTGATGATGTTGGGATGTCC | + |
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Preference number: 5 (lower is better) Translates to: RPFSRDSSRPYAVLP*GGTHTWLTDDVGMS Trigger: GGACATCCCAACATCATCAGTTAACCAAGTGTGTGTTCCACCCCAGGGAAGGACAGCGTAGGGCCGAGAGGAATCACGGCTGAATGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655999.1 ENST00000656716.1 |
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| CDS CCA 90 bp | TCCTCTCGGCCCTACGCTGTCCTTCCCTGGGGTGGAACACACACTTaGTTAACTGATGATGTTGGGATGTCCTTTGAATGGACTTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SSRPYAVLPWGGTHT*LTDDVGMSFEWTCA Trigger: AGCACAAGTCCATTCAAAGGACATCCCAACATCATCAGTTAACCAAGTGTGTGTTCCACCCCAGGGAAGGACAGCGTAGGGCCGAGAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655999.1 |
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| CDS CCA 90 bp | AGTCCCTGGCACAGAGAAAGCTTGGGATGGCTTGAGGGGATGCAGTaGGCTAAAGACAGTCTTCTCCTTCCAATGGAAACCTGTCAACTT | + |
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Preference number: 5 (lower is better) Translates to: SPWHRESLGWLEGMQ*AKDSLLLPMETCQL Trigger: AAGTTGACAGGTTTCCATTGGAAGGAGAAGACTGTCTTTAGCCCACTGCATCCCCTCAAGCCATCCCAAGCTTTCTCTGTGCCAGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654094.1 |
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| CDS GCA 90 bp | GAGAAGGAATTAGGAAGAGCATTTTGGAGTCCATCAAGATATGCGTaGTTGAGTCTCGCCATCACTGTCTCTGTCTCTTTCTTGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: EKELGRAFWSPSRYA*LSLAITVSVSFLCW Trigger: CCAGCACAAGAAAGAGACAGAGACAGTGATGGCGAGACTCAAGCACGCATATCTTGATGGACTCCAAAATGCTCTTCCTAATTCCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429657.2 ENST00000654094.1 ENST00000654710.1 ENST00000656716.1 |
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| CDS GCA 90 bp | CACAGAGAAGGAATTAGGAAGAGCATTTTGGAGTCCATCAAGATATaGGTGCTTGAGTCTCGCCATCACTGTCTCTGTCTCTTTCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: HREGIRKSILESIKI*VLESRHHCLCLFLV Trigger: CACAAGAAAGAGACAGAGACAGTGATGGCGAGACTCAAGCACGCATATCTTGATGGACTCCAAAATGCTCTTCCTAATTCCTTCTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429657.2 ENST00000654094.1 ENST00000654710.1 ENST00000656716.1 |
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| CDS GCA 90 bp | GAGAAGGAATTAGGAAGAGCATTTTGGAGTCCATCAAGATATGCGTaGTTGAGTCTCGCCATCACTGTCTCTGTCTCTTTCTCATATAGG | + |
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Preference number: 5 (lower is better) Translates to: EKELGRAFWSPSRYA*LSLAITVSVSFSYR Trigger: CCTATATGAGAAAGAGACAGAGACAGTGATGGCGAGACTCAAGCACGCATATCTTGATGGACTCCAAAATGCTCTTCCTAATTCCTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649001.1 |
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| CDS GCA 90 bp | CACAGAGAAGGAATTAGGAAGAGCATTTTGGAGTCCATCAAGATATaGGTGCTTGAGTCTCGCCATCACTGTCTCTGTCTCTTTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: HREGIRKSILESIKI*VLESRHHCLCLFLI Trigger: TATGAGAAAGAGACAGAGACAGTGATGGCGAGACTCAAGCACGCATATCTTGATGGACTCCAAAATGCTCTTCCTAATTCCTTCTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649001.1 |
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| CDS TCA 90 bp | ACTGAAGTGTCAGCAATGAATTGGCATACCAATGCAAATAGAGGATaGAGAATGAGCCACAGAGAAGGAATTAGGAAGAGCATTTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: TEVSAMNWHTNANRG*RMSHREGIRKSILE Trigger: CTCCAAAATGCTCTTCCTAATTCCTTCTCTGTGGCTCATTCTTCATCCTCTATTTGCATTGGTATGCCAATTCATTGCTGACACTTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000429657.2 ENST00000654094.1 |
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| CDS CCA 72 bp | CGTGCGTCCAGTCCCTGGCACAGAGAAAGCTTGGGATaGCTTGAGGGGATGCAGTGGGCTAAAGACAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RASSPWHRESLG*LEGMQWAKDSL Trigger: AAGACTGTCTTTAGCCCACTGCATCCCCTCAAGCCATCCCAAGCTTTCTCTGTGCCAGGGACTGGACGCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000429657.2 ENST00000649001.1 ENST00000654094.1 ENST00000654710.1 ENST00000655999.1 ENST00000656716.1 ENST00000666781.1 |
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| CDS CCA 72 bp | TTTAGCGTGCGTCCAGTCCCTGGCACAGAGAAAGCTTaGGATGGCTTGAGGGGATGCAGTGGGCTAAAGACA | + |
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Preference number: 6 (lower is better) Translates to: FSVRPVPGTEKA*DGLRGCSGLKT Trigger: TGTCTTTAGCCCACTGCATCCCCTCAAGCCATCCCAAGCTTTCTCTGTGCCAGGGACTGGACGCACGCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000429657.2 ENST00000649001.1 ENST00000654094.1 ENST00000654710.1 ENST00000655999.1 ENST00000656716.1 ENST00000666781.1 |
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| CDS CCA 72 bp | CACAGAGAAAGCTTGGGATGGCTTGAGGGGATGCAGTaGGCTAAAGACAGTCTTCTCCTTCCAATGGAAACC | + |
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Preference number: 6 (lower is better) Translates to: HRESLGWLEGMQ*AKDSLLLPMET Trigger: GGTTTCCATTGGAAGGAGAAGACTGTCTTTAGCCCACTGCATCCCCTCAAGCCATCCCAAGCTTTCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000429657.2 ENST00000649001.1 ENST00000654094.1 ENST00000654710.1 ENST00000655999.1 ENST00000656716.1 ENST00000666781.1 |
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| CDS CCA 72 bp | CCCTACGCTGTCCTTCCCTGGGGTGGAACACACACTTaGTTAACTGATGATGTTGGGATGTCCTTTGAATGG | + |
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Preference number: 6 (lower is better) Translates to: PYAVLPWGGTHT*LTDDVGMSFEW Trigger: CCATTCAAAGGACATCCCAACATCATCAGTTAACCAAGTGTGTGTTCCACCCCAGGGAAGGACAGCGTAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655999.1 ENST00000656716.1 |
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| CDS TCA 72 bp | CGGCCCTACGCTGTCCTTCCCAATGCAAATAGAGGATaGAGAATGAGCCACAGAGAAGGAATTAGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RPYAVLPNANRG*RMSHREGIRKS Trigger: GCTCTTCCTAATTCCTTCTCTGTGGCTCATTCTTCATCCTCTATTTGCATTGGGAAGGACAGCGTAGGGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000649001.1 ENST00000654710.1 |
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| CDS GCA 72 bp | CTAAGAAAGAAGTCCACACAGGTTCGTATTTTAGCGTaGGTCCAGTCCCTGGCACAGAGAAAGCTTGGGATG | + |
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Preference number: 6 (lower is better) Translates to: LRKKSTQVRILA*VQSLAQRKLGM Trigger: CATCCCAAGCTTTCTCTGTGCCAGGGACTGGACGCACGCTAAAATACGAACCTGTGTGGACTTCTTTCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000429657.2 ENST00000649001.1 ENST00000654094.1 ENST00000654710.1 ENST00000655999.1 ENST00000656716.1 ENST00000666781.1 |
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| CDS CAA 90 bp | AAGGAATTAGGAAGAGCATTTTGGAGTCCATCAAGATATGCGTGCTaGAGTCTCGCCATCACTGTCTCTGTCTCTTTCTTGTGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: KELGRAFWSPSRYAC*SLAITVSVSFLCWC Trigger: GCACCAGCACAAGAAAGAGACAGAGACAGTGATGGCGAGACTCAAGCACGCATATCTTGATGGACTCCAAAATGCTCTTCCTAATTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429657.2 ENST00000654094.1 ENST00000654710.1 ENST00000656716.1 |
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| CDS GCA 72 bp | GGAATTAGGAAGAGCATTTTGGAGTCCATCAAGATATaGGTGCTTGAGTCTCGCCATCACTGTCTCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GIRKSILESIKI*VLESRHHCLCL Trigger: GAGACAGAGACAGTGATGGCGAGACTCAAGCACGCATATCTTGATGGACTCCAAAATGCTCTTCCTAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000429657.2 ENST00000649001.1 ENST00000654094.1 ENST00000654710.1 ENST00000656716.1 |
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| CDS TCA 72 bp | AATAGACAACCATCTTTCTTAGTAAGGTTTTGGTGCTaGCTGATGGGATGCAGGAGCCAACAGCTTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: NRQPSFLVRFWC*LMGCRSQQLLE Trigger: CTCAAGAAGCTGTTGGCTCCTGCATCCCATCAGTCAGCACCAAAACCTTACTAAGAAAGATGGTTGTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649001.1 |
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| CDS CAA 72 bp | CCTTCCAATGGAAACCTCCTAAGTGGTTTAAATCTTTaGATATCTGGGACCCCCAAACCCCTAGAAAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PSNGNLLSGLNL*ISGTPKPLESQ Trigger: CTGACTTTCTAGGGGTTTGGGGGTCCCAGATATCAAAAGATTTAAACCACTTAGGAGGTTTCCATTGGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000429657.2 ENST00000649001.1 ENST00000654710.1 ENST00000655999.1 ENST00000656716.1 ENST00000666781.1 |
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| CDS TCA 72 bp | GGATGTCCTTTGAATGGACTCAATGCAAATAGAGGATaGAGAATGAGCCACAGAGAAGGAATTAGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GCPLNGLNANRG*RMSHREGIRKS Trigger: GCTCTTCCTAATTCCTTCTCTGTGGCTCATTCTTCATCCTCTATTTGCATTGAGTCCATTCAAAGGACATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656716.1 |
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| CDS TCA 72 bp | TCAGCAATGAATTGGCATACCAATGCAAATAGAGGATaGAGAATGAGCCACAGAGAAGGAATTAGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SAMNWHTNANRG*RMSHREGIRKS Trigger: GCTCTTCCTAATTCCTTCTCTGTGGCTCATTCTTCATCCTCTATTTGCATTGGTATGCCAATTCATTGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429657.2 ENST00000654094.1 |
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| CDS TCA 72 bp | TCCTCATGCAATGCCACTTCCAAGGCAGTACACATTTaGACTGGCAAAGTTTGTCATACTGACATTGATGTA | + |
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Preference number: 6 (lower is better) Translates to: SSCNATSKAVHI*TGKVCHTDIDV Trigger: TACATCAATGTCAGTATGACAAACTTTGCCAGTTCAAATGTGTACTGCCTTGGAAGTGGCATTGCATGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000429657.2 ENST00000654094.1 |
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| CDS TCA 72 bp | TCATTCTTTTCAACTCAGTCTGGATCTTTATCACTTTaGAGGCATAGGTGGCACTTCACAGACAAGCACATT | + |
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Preference number: 6 (lower is better) Translates to: SFFSTQSGSLSL*RHRWHFTDKHI Trigger: AATGTGCTTGTCTGTGAAGTGCCACCTATGCCTTCAAAGTGATAAAGATCCAGACTGAGTTGAAAAGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429657.2 |
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| CDS GCA 72 bp | TTCCTCGCGATTTTTATTGCAACCACCTTTACATCATaGAGAGGTTACTACAGGTTCTGTCGTTTTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: FLAIFIATTFTS*RGYYRFCRFHF Trigger: AAAATGAAAACGACAGAACCTGTAGTAACCTCTGCATGATGTAAAGGTGGTTGCAATAAAAATCGCGAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000429657.2 ENST00000654094.1 |
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