Pregenerated sensors for LINC02527 (Homo sapiens)
Ensembl gene IDs: ENSG00000227012Ensembl transcript IDs: ENST00000449069.2, ENST00000653948.1, ENST00000655782.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCTTTGGAGAATGGGAGGCAAGAGCCTCAGGATTTGGAGACAATATaGACGGCCTGGCCCAGAATTAGTCATAGGGCTGCAAGCGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SLENGRQEPQDLETI*TAWPRISHRAASER Trigger: TCTCTCGCTTGCAGCCCTATGACTAATTCTGGGCCAGGCCGTGCATATTGTCTCCAAATCCTGAGGCTCTTGCCTCCCATTCTCCAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS GCA 90 bp | GCCTGGCCCAGAATTAGTCATAGGGCTGCAAGCGAGAGAATTAATTaGAAATCTGCCTATGGCATGGCCGTACTCCTCAGTGCTTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: AWPRISHRAASERIN*KSAYGMAVLLSAFP Trigger: GGGAAAAGCACTGAGGAGTACGGCCATGCCATAGGCAGATTTGCAATTAATTCTCTCGCTTGCAGCCCTATGACTAATTCTGGGCCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS CCA 90 bp | AATGGGAGGCAAGAGCCTCAGGATTTGGAGACAATATGCACGGCCTaGCCCAGAATTAGTCATAGGGCTGCAAGCGAGAGAATTAATTGC | + |
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Preference number: 5 (lower is better) Translates to: NGRQEPQDLETICTA*PRISHRAASERINC Trigger: GCAATTAATTCTCTCGCTTGCAGCCCTATGACTAATTCTGGGCCAGGCCGTGCATATTGTCTCCAAATCCTGAGGCTCTTGCCTCCCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS CCA 90 bp | AGGCTGATTATTCTTTGGAGAATGGGAGGCAAGAGCCTCAGGATTTaGAGACAATATGCACGGCCTGGCCCAGAATTAGTCATAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RLIILWRMGGKSLRI*RQYARPGPELVIGL Trigger: CAGCCCTATGACTAATTCTGGGCCAGGCCGTGCATATTGTCTCCAAATCCTGAGGCTCTTGCCTCCCATTCTCCAAAGAATAATCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS CCA 90 bp | ATAGGGCTGCAAGCGAGAGAATTAATTGCAAATCTGCCTATGGCATaGCCGTACTCCTCAGTGCTTTTCCCTCTCTTTGCTCCTAGGATG | + |
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Preference number: 5 (lower is better) Translates to: IGLQARELIANLPMA*PYSSVLFPLFAPRM Trigger: CATCCTAGGAGCAAAGAGAGGGAAAAGCACTGAGGAGTACGGCCATGCCATAGGCAGATTTGCAATTAATTCTCTCGCTTGCAGCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS TCA 90 bp | ACGTGCCAACCATACATATTTTATTTGATCCTCACAACAACCCAATaGGGTAGGTTCTCATTTTACAGAAAGGAGGTCAAGGTTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TCQPYIFYLILTTTQ*GRFSFYRKEVKVSR Trigger: TCTGGAAACCTTGACCTCCTTTCTGTAAAATGAGAACCTACCTCATTGGGTTGTTGTGAGGATCAAATAAAATATGTATGGTTGGCACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653948.1 ENST00000655782.1 |
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| CDS CAA 90 bp | CACTCCCCTGCTCTCCTTCTCTGCTCTTTGTGTGTCTACCATCTTTaGCATCTCAGCTCAAATGTCCCCGTCTCCGGGAGGGCCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: HSPALLLCSLCVYHL*HLSSNVPVSGRASL Trigger: CAGGGAGGCCCTCCCGGAGACGGGGACATTTGAGCTGAGATGCAAAAGATGGTAGACACACAAAGAGCAGAGAAGGAGAGCAGGGGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655782.1 |
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| CDS TCA 72 bp | GCCACAGTTGAGAGGGGCCTAAGGAGACGTGATGATTaGATGTCCTGTAGGATCCTGTCTTCTGCGTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: ATVERGLRRRDD*MSCRILSSASL Trigger: AAGCGACGCAGAAGACAGGATCCTACAGGACATTCAATCATCACGTCTCCTTAGGCCCCTCTCAACTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655782.1 |
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| CDS GCA 72 bp | CTCTCCTTCTCTGCTCTTTGTGTGTCTACCATCTTTTaGATCTCAGCTCAAATGTCCCCGTCTCCGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LSFSALCVSTIF*ISAQMSPSPGG Trigger: CCCTCCCGGAGACGGGGACATTTGAGCTGAGATGCAAAAGATGGTAGACACACAAAGAGCAGAGAAGGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655782.1 |
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| CDS CCA 72 bp | CAAGAGCCTCAGGATTTGGAGACAATATGCACGGCCTaGCCCAGAATTAGTCATAGGGCTGCAAGCGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: QEPQDLETICTA*PRISHRAASER Trigger: TCTCTCGCTTGCAGCCCTATGACTAATTCTGGGCCAGGCCGTGCATATTGTCTCCAAATCCTGAGGCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS CAA 72 bp | GCTCTCCTTCTCTGCTCTTTGTGTGTCTACCATCTTTaGCATCTCAGCTCAAATGTCCCCGTCTCCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ALLLCSLCVYHL*HLSSNVPVSGR Trigger: CCTCCCGGAGACGGGGACATTTGAGCTGAGATGCAAAAGATGGTAGACACACAAAGAGCAGAGAAGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655782.1 |
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| CDS CAA 90 bp | GAGGCTGATTATTCTTTGGAGAATGGGAGGCAAGAGCCTCAGGATTaGGAGACAATATGCACGGCCTGGCCCAGAATTAGTCATAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: EADYSLENGRQEPQD*ETICTAWPRISHRA Trigger: AGCCCTATGACTAATTCTGGGCCAGGCCGTGCATATTGTCTCCAAATCCTGAGGCTCTTGCCTCCCATTCTCCAAAGAATAATCAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS TCA 72 bp | TTTAGACAGGACAGGAGGATTCCTTGCTGGAGAAACTaGGCCGTTCCACACTCTCCCCACGTGAAAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: FRQDRRIPCWRN*AVPHSPHVKEK Trigger: TTTCTCTTTCACGTGGGGAGAGTGTGGAACGGCTCAGTTTCTCCAGCAAGGAATCCTCCTGTCCTGTCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS TCA 72 bp | GCCACAGTTGAGAGGGGCCTAAGGAGACGTGATGATTaGATGTCCTGTAGGATCCTCAGATGGAAATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ATVERGLRRRDD*MSCRILRWKCR Trigger: TCTGCATTTCCATCTGAGGATCCTACAGGACATTCAATCATCACGTCTCCTTAGGCCCCTCTCAACTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653948.1 |
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| CDS CCA 72 bp | CAAGCGAGAGAATTAATTGCAAATCTGCCTATGGCATaGCCGTACTCCTCAGTGCTTTTCCCTCTCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: QARELIANLPMA*PYSSVLFPLFA Trigger: AGCAAAGAGAGGGAAAAGCACTGAGGAGTACGGCCATGCCATAGGCAGATTTGCAATTAATTCTCTCGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS GCA 72 bp | AGAATTAGTCATAGGGCTGCAAGCGAGAGAATTAATTaGAAATCTGCCTATGGCATGGCCGTACTCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: RISHRAASERIN*KSAYGMAVLLS Trigger: ACTGAGGAGTACGGCCATGCCATAGGCAGATTTGCAATTAATTCTCTCGCTTGCAGCCCTATGACTAATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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| CDS GCA 72 bp | GTCTTAGAAAAGTATGTGACAGAGGCAGGATTTAAATaGAGGCCTAACTTAACCATGAAAGTGTTCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: VLEKYVTEAGFK*RPNLTMKVFCL Trigger: GAGGCAGAACACTTTCATGGTTAAGTTAGGCCTGCATTTAAATCCTGCCTCTGTCACATACTTTTCTAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653948.1 ENST00000655782.1 |
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| CDS TCA 72 bp | CCATACATATTTTATTTGATCCTCACAACAACCCAATaGGGTAGGTTCTCATTTTACAGAAAGGAGGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: PYIFYLILTTTQ*GRFSFYRKEVK Trigger: CTTGACCTCCTTTCTGTAAAATGAGAACCTACCTCATTGGGTTGTTGTGAGGATCAAATAAAATATGTATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653948.1 ENST00000655782.1 |
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| CDS CAA 72 bp | GAAAGGAATGTAGGAAAGGTGTCTGATATAACCAGATaGAGGATATCATATCTTAAAGGACAAGCAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: ERNVGKVSDITR*RISYLKGQARS Trigger: ACTTCTTGCTTGTCCTTTAAGATATGATATCCTCAATCTGGTTATATCAGACACCTTTCCTACATTCCTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449069.2 ENST00000653948.1 ENST00000655782.1 |
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