Pregenerated sensors for LINC02525 (Homo sapiens)
Ensembl gene IDs: ENSG00000230269Ensembl transcript IDs: ENST00000425384.7, ENST00000435043.3, ENST00000656983.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAAACAGAGCATGGAGAATGTGGGAGCCTGGGTGAACTAACTGAGTaGCCCACTACAGCAGCTCCAGACACAAAGCTTGTCCATCCACAA | + |
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Preference number: 5 (lower is better) Translates to: ETEHGECGSLGELTE*PTTAAPDTKLVHPQ Trigger: TTGTGGATGGACAAGCTTTGTGTCTGGAGCTGCTGTAGTGGGCCACTCAGTTAGTTCACCCAGGCTCCCACATTCTCCATGCTCTGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425384.7 ENST00000435043.3 ENST00000656983.1 |
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| CDS CCA 90 bp | AAAGGTCCCCAGCTGCTAACGTTCCATCTGCCAAAGCAAATCATGTaGTCAAACAGTTCCGAAGGCTGTACGGGAAGCATGGCTGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: KGPQLLTFHLPKQIM*SNSSEGCTGSMAGK Trigger: CTTCCCAGCCATGCTTCCCGTACAGCCTTCGGAACTGTTTGACCACATGATTTGCTTTGGCAGATGGAACGTTAGCAGCTGGGGACCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435043.3 |
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| CDS CCA 90 bp | AGCAAATCATGTGGTCAAACAGTTCCGAAGGCTGTACGGGAAGCATaGCTGGGAAGGCCTCAGGAAACTTATAATCATGGCAGAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SKSCGQTVPKAVREA*LGRPQETYNHGRKQ Trigger: TTGCTTTCTGCCATGATTATAAGTTTCCTGAGGCCTTCCCAGCCATGCTTCCCGTACAGCCTTCGGAACTGTTTGACCACATGATTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435043.3 |
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| CDS CCA 90 bp | TCTTTTGGATTGTCTAGTGCAGTTCCGAAGGCTGTACGGGAAGCATaGCTGGGAAGGCCTCAGGAAACTTATAATCATGGCAGAAAGCAA | + |
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Preference number: 5 (lower is better) Translates to: SFGLSSAVPKAVREA*LGRPQETYNHGRKQ Trigger: TTGCTTTCTGCCATGATTATAAGTTTCCTGAGGCCTTCCCAGCCATGCTTCCCGTACAGCCTTCGGAACTGCACTAGACAATCCAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656983.1 |
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| CDS CCA 72 bp | CATGGAGAATGTGGGAGCCTGGGTGAACTAACTGAGTaGCCCACTACAGCAGCTCCAGACACAAAGCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: HGECGSLGELTE*PTTAAPDTKLV Trigger: GACAAGCTTTGTGTCTGGAGCTGCTGTAGTGGGCCACTCAGTTAGTTCACCCAGGCTCCCACATTCTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425384.7 ENST00000435043.3 ENST00000656983.1 |
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| CDS CCA 72 bp | TTCCTGGCAGAGGTATCTTTGGGTAAACGCTGCAGCTaGAAGTGCTGCCGGCAAGTGTTCTCAGGGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: FLAEVSLGKRCS*KCCRQVFSGQM Trigger: CATTTGCCCTGAGAACACTTGCCGGCAGCACTTCCAGCTGCAGCGTTTACCCAAAGATACCTCTGCCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425384.7 ENST00000435043.3 ENST00000656983.1 |
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| CDS CAA 72 bp | CTGAGTGGCCCACTACAGCAGCTCCAGACACAAAGCTaGTCCATCCACAACCTACAGCAGCATGAAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LSGPLQQLQTQS*SIHNLQQHEAF Trigger: AAAGGCTTCATGCTGCTGTAGGTTGTGGATGGACAAGCTTTGTGTCTGGAGCTGCTGTAGTGGGCCACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425384.7 ENST00000435043.3 ENST00000656983.1 |
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| CDS CCA 72 bp | TGTGGTCAAACAGTTCCGAAGGCTGTACGGGAAGCATaGCTGGGAAGGCCTCAGGAAACTTATAATCATGGC | + |
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Preference number: 6 (lower is better) Translates to: CGQTVPKAVREA*LGRPQETYNHG Trigger: GCCATGATTATAAGTTTCCTGAGGCCTTCCCAGCCATGCTTCCCGTACAGCCTTCGGAACTGTTTGACCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435043.3 |
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| CDS CCA 72 bp | TTGTCTAGTGCAGTTCCGAAGGCTGTACGGGAAGCATaGCTGGGAAGGCCTCAGGAAACTTATAATCATGGC | + |
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Preference number: 6 (lower is better) Translates to: LSSAVPKAVREA*LGRPQETYNHG Trigger: GCCATGATTATAAGTTTCCTGAGGCCTTCCCAGCCATGCTTCCCGTACAGCCTTCGGAACTGCACTAGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656983.1 |
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| CDS CCA 72 bp | CAGCTGCTAACGTTCCATCTGCCAAAGCAAATCATGTaGTCAAACAGTTCCGAAGGCTGTACGGGAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: QLLTFHLPKQIM*SNSSEGCTGSM Trigger: CATGCTTCCCGTACAGCCTTCGGAACTGTTTGACCACATGATTTGCTTTGGCAGATGGAACGTTAGCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435043.3 |
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| CDS CAA 90 bp | ACTCAGCTCTTACAATGCTGGCAGCCAGGAATAAGGAGCAGGACATaGGCGTATTCTATGCTGGGAAGTATGATCAGCTCAAGAAAGACC | + |
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Preference number: 6 (lower is better) Translates to: TQLLQCWQPGIRSRT*AYSMLGSMISSRKT Trigger: GGTCTTTCTTGAGCTGATCATACTTCCCAGCATAGAATACGCCAATGTCCTGCTCCTTATTCCTGGCTGCCAGCATTGTAAGAGCTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425384.7 ENST00000435043.3 |
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| CDS CAA 72 bp | TTACAATGCTGGCAGCCAGGAATAAGGAGCAGGACATaGGCGTATTCTATGCTGGGAAGTATGATCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LQCWQPGIRSRT*AYSMLGSMISS Trigger: TGAGCTGATCATACTTCCCAGCATAGAATACGCCAATGTCCTGCTCCTTATTCCTGGCTGCCAGCATTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425384.7 ENST00000435043.3 |
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| CDS CAA 72 bp | TGGGAAGCTAGGATCATGTCCTATGCCAGCCAATTGTaGTGGGCCACTCACTGGATTTCTTTAATTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: WEARIMSYASQL*WATHWISLILW Trigger: CCAGAGAATTAAAGAAATCCAGTGAGTGGCCCACAACAATTGGCTGGCATAGGACATGATCCTAGCTTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425384.7 ENST00000435043.3 ENST00000656983.1 |
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| CDS CAA 72 bp | CTGTGGGAAGCTAGGATCATGTCCTATGCCAGCCAATaGTTGTGGGCCACTCACTGGATTTCTTTAATTCTC | + |
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Preference number: 6 (lower is better) Translates to: LWEARIMSYASQ*LWATHWISLIL Trigger: GAGAATTAAAGAAATCCAGTGAGTGGCCCACAACAATTGGCTGGCATAGGACATGATCCTAGCTTCCCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425384.7 ENST00000435043.3 ENST00000656983.1 |
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| CDS CAA 90 bp | AGATTCAGTGCCTTGGCTTGTAGATGTAAAGTTTTTGTAGATCTTTaGGATTGTCTAGTGCAGTTCCGAAGGCTGTACGGGAAGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: RFSALACRCKVFVDL*DCLVQFRRLYGKHG Trigger: GCCATGCTTCCCGTACAGCCTTCGGAACTGCACTAGACAATCCAAAAGATCTACAAAAACTTTACATCTACAAGCCAAGGCACTGAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656983.1 |
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| CDS CAA 72 bp | GCCTTGGCTTGTAGATGTAAAGTTTTTGTAGATCTTTaGGATTGTCTAGTGCAGTTCCGAAGGCTGTACGGG | + |
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Preference number: 6 (lower is better) Translates to: ALACRCKVFVDL*DCLVQFRRLYG Trigger: CCCGTACAGCCTTCGGAACTGCACTAGACAATCCAAAAGATCTACAAAAACTTTACATCTACAAGCCAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656983.1 |
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