Pregenerated sensors for LINC02523 (Homo sapiens)
Ensembl gene IDs: ENSG00000224506Ensembl transcript IDs: ENST00000423208.2, ENST00000670227.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACAGCTTGTGTTTTCTGGAAGCAGTCACCGAGATGGAATGCGGGGTaGCGGATATTCATTAGGGATCAACACCTGGGTTTGCCCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TACVFWKQSPRWNAG*RIFIRDQHLGLPLR Trigger: CCTCAAGGGCAAACCCAGGTGTTGATCCCTAATGAATATCCGGCACCCCGCATTCCATCTCGGTGACTGCTTCCAGAAAACACAAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670227.1 |
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| CDS CCA 90 bp | CTTCTCCCTAAAACAACTCACAGAACTAGTGGCTTCAGAGGGCCTTaGGGCTCTCCCTTTATTCAGGCTGTGGGTCACGGTGCTCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LLPKTTHRTSGFRGP*GSPFIQAVGHGALC Trigger: ACAAAGAGCACCGTGACCCACAGCCTGAATAAAGGGAGAGCCCCAAGGCCCTCTGAAGCCACTAGTTCTGTGAGTTGTTTTAGGGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS GCA 90 bp | GTTCGGCTTGGGCCAGTTCCAAACCACAGACCTTCTTTGCATTCTTaGCCACTCTACTGTGTCCTTTCTGTTGGATTTGCAGAGGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: VRLGPVPNHRPSLHS*PLYCVLSVGFAEED Trigger: ATCCTCCTCTGCAAATCCAACAGAAAGGACACAGTAGAGTGGGCAAGAATGCAAAGAAGGTCTGTGGTTTGGAACTGGCCCAAGCCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS CCA 90 bp | CCCATGTGCTCCATACGCTGCCTCACTCCAGCGAACATTCCGCGATaGCTCTGTATCCAAGAAGTAGGGTGTTGTACTTATGAATCAATG | + |
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Preference number: 5 (lower is better) Translates to: PMCSIRCLTPANIPR*LCIQEVGCCTYESM Trigger: CATTGATTCATAAGTACAACACCCTACTTCTTGGATACAGAGCCATCGCGGAATGTTCGCTGGAGTGAGGCAGCGTATGGAGCACATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CCA 90 bp | AAGGGGGATCTAACACATCTTTGTCTATCACAAGTTGCTAGACCCTaGGCTAAATGCAGGGAACACGCAGATAAAGAGGACACAATCCCT | + |
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Preference number: 5 (lower is better) Translates to: KGDLTHLCLSQVARP*AKCREHADKEDTIP Trigger: AGGGATTGTGTCCTCTTTATCTGCGTGTTCCCTGCATTTAGCCCAGGGTCTAGCAACTTGTGATAGACAAAGATGTGTTAGATCCCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS TCA 90 bp | CCCCCAACTCCTTTCTCAGTTATTGGATACCAGCATGACCTGAAATaGAGCAGTTTTTATTTACAGCTGAGGCCAGCTCTTACAGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PPTPFSVIGYQHDLK*SSFYLQLRPALTEL Trigger: CAGCTCTGTAAGAGCTGGCCTCAGCTGTAAATAAAAACTGCTTCATTTCAGGTCATGCTGGTATCCAATAACTGAGAAAGGAGTTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS GCA 90 bp | CTAACACATCTTTGTCTATCACAAGTTGCTAGACCCTGGGCTAAATaGAGGGAACACGCAGATAAAGAGGACACAATCCCTTTGCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: LTHLCLSQVARPWAK*REHADKEDTIPLLK Trigger: TTTGAGCAAAGGGATTGTGTCCTCTTTATCTGCGTGTTCCCTGCATTTAGCCCAGGGTCTAGCAACTTGTGATAGACAAAGATGTGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CCA 90 bp | TTACCTGGGCTTGGATGGGCACAGTCTAATAAGGTAAATAATTCTTaGTTGTCTGTCTTCTCCCTAAAACAACTCACAGAACTAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LPGLGWAQSNKVNNS*LSVFSLKQLTELVA Trigger: AGCCACTAGTTCTGTGAGTTGTTTTAGGGAGAAGACAGACAACCAAGAATTATTTACCTTATTAGACTGTGCCCATCCAAGCCCAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS TCA 90 bp | ATTTATCAGTGGTTACCTGTAACGATTTTTCCTTCCAATAATTCTTaGTTGCTCAAGGCCCTAGTTGAGGGTTTTTCCTGTTCATGGACA | + |
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Preference number: 5 (lower is better) Translates to: IYQWLPVTIFPSNNS*LLKALVEGFSCSWT Trigger: TGTCCATGAACAGGAAAAACCCTCAACTAGGGCCTTGAGCAATCAAGAATTATTGGAAGGAAAAATCGTTACAGGTAACCACTGATAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS TCA 90 bp | AGGGAACACGCAGATAAAGAGGACACAATCCCTTTGCTCAAAAAGTaGTTGTTCCATCTGATTTATCAGTGGTTACCTGTAACGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: REHADKEDTIPLLKK*LFHLIYQWLPVTIF Trigger: AAAAATCGTTACAGGTAACCACTGATAAATCAGATGGAACAATCACTTTTTGAGCAAAGGGATTGTGTCCTCTTTATCTGCGTGTTCCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS TCA 90 bp | GTGTTGTTTTCTGAAACCTTAGCAAAATTAGCCTTCTCCTTACTTTaGGTTCTTAAGGAAGGGAAAGGAGAGAAAGTAAGTGAACTTCGA | + |
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Preference number: 5 (lower is better) Translates to: VLFSETLAKLAFSLL*VLKEGKGEKVSELR Trigger: TCGAAGTTCACTTACTTTCTCTCCTTTCCCTTCCTTAAGAACTCAAAGTAAGGAGAAGGCTAATTTTGCTAAGGTTTCAGAAAACAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670227.1 |
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| CDS CCA 90 bp | ATTATCCTTCACGATTCCTTCTTAGCTATTAGCATGCTTTCTATTTaGCGTACATATACCATTCATAAGAACTCATTATTAGGGCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: IILHDSFLAISMLSI*RTYTIHKNSLLGPG Trigger: GCCTGGCCCTAATAATGAGTTCTTATGAATGGTATATGTACGCCAAATAGAAAGCATGCTAATAGCTAAGAAGGAATCGTGAAGGATAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS TCA 90 bp | TTCTCAACTCACATCACTCTATCCACTCAATTATTAAAGATTTATTaGGTACATAATGGGCATGTCACAGCTTGTGTTTTCTGGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: FSTHITLSTQLLKIY*VHNGHVTACVFWKQ Trigger: CTGCTTCCAGAAAACACAAGCTGTGACATGCCCATTATGTACTCAATAAATCTTTAATAATTGAGTGGATAGAGTGATGTGAGTTGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CCA 90 bp | AGAGAACCATTCAGTTGTAAAGCCAGAAGTAAGGTTAAGAACTTTTaGCCTCGTCTTTCTCATTTAGAAGTAAGGAAATTGATCCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: REPFSCKARSKVKNF*PRLSHLEVRKLILE Trigger: TTCTAGGATCAATTTCCTTACTTCTAAATGAGAAAGACGAGGCCAAAAGTTCTTAACCTTACTTCTGGCTTTACAACTGAATGGTTCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CCA 72 bp | CAGCTGAGGCCAGCTCTTACAGAGCTGATTGGAGGCTaGAGGCTGACTGCACCCCAGCAGCTGAGCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: QLRPALTELIGG*RLTAPQQLSSK Trigger: CTTGCTGCTCAGCTGCTGGGGTGCAGTCAGCCTCCAGCCTCCAATCAGCTCTGTAAGAGCTGGCCTCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CCA 72 bp | TTATTTACAGCTGAGGCCAGCTCTTACAGAGCTGATTaGAGGCTGGAGGCTGACTGCACCCCAGCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LFTAEASSYRAD*RLEADCTPAAE Trigger: CTCAGCTGCTGGGGTGCAGTCAGCCTCCAGCCTCCAATCAGCTCTGTAAGAGCTGGCCTCAGCTGTAAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 90 bp | TGGGCCAAGGGAGAAGTCACTATCCAGAGTAGGGCTGAGAAGAACTaGGCCCACTTGATAGGGAGCTCTGGAGTCAGAATTGGCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: WAKGEVTIQSRAEKN*AHLIGSSGVRIGHQ Trigger: CTGATGGCCAATTCTGACTCCAGAGCTCCCTATCAAGTGGGCCAAGTTCTTCTCAGCCCTACTCTGGATAGTGACTTCTCCCTTGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS GCA 72 bp | TTTGTAAGATGTCCATCTGGGTCTGCATGTCCCATGTaGTCCATACGCTGCCTCACTCCAGCGAACATTCCG | + |
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Preference number: 6 (lower is better) Translates to: FVRCPSGSACPM*SIRCLTPANIP Trigger: CGGAATGTTCGCTGGAGTGAGGCAGCGTATGGAGCACATGGGACATGCAGACCCAGATGGACATCTTACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 90 bp | GGTCACCCCAGAATGAGGGGAGATGGGTTGGTCTTGAGCAGGAAGTaGTCTTCATCTTCCTTCTTTCTTCTTCCCTCTCTCCACCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GHPRMRGDGLVLSRK*SSSSFFLLPSLHPS Trigger: AGAAGGGTGGAGAGAGGGAAGAAGAAAGAAGGAAGATGAAGACAACTTCCTGCTCAAGACCAACCCATCTCCCCTCATTCTGGGGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS CCA 72 bp | GATGAAGACAGGGCCCTTCTCAGAGCAGATTGGAAATaGACCCCTATATGTCCAGCTAGTGCTCTCAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: DEDRALLRADWK*TPICPASALKA Trigger: GGCTTTGAGAGCACTAGCTGGACATATAGGGGTCCATTTCCAATCTGCTCTGAGAAGGGCCCTGTCTTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS CAA 90 bp | AGTTCGGCTTGGGCCAGTTCCAAACCACAGACCTTCTTTGCATTCTaGCCCACTCTACTGTGTCCTTTCTGTTGGATTTGCAGAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSAWASSKPQTFFAF*PTLLCPFCWICRGG Trigger: TCCTCCTCTGCAAATCCAACAGAAAGGACACAGTAGAGTGGGCAAGAATGCAAAGAAGGTCTGTGGTTTGGAACTGGCCCAAGCCGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS CCA 72 bp | TCCATACGCTGCCTCACTCCAGCGAACATTCCGCGATaGCTCTGTATCCAAGAAGTAGGGTGTTGTACTTAT | + |
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Preference number: 6 (lower is better) Translates to: SIRCLTPANIPR*LCIQEVGCCTY Trigger: ATAAGTACAACACCCTACTTCTTGGATACAGAGCCATCGCGGAATGTTCGCTGGAGTGAGGCAGCGTATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CCA 72 bp | TCAGAGGGCCTTGGGGCTCTCCCTTTATTCAGGCTGTaGGTCACGGTGCTCTTTGTTGACAGTTTAATGTAT | + |
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Preference number: 6 (lower is better) Translates to: SEGLGALPLFRL*VTVLFVDSLMY Trigger: ATACATTAAACTGTCAACAAAGAGCACCGTGACCCACAGCCTGAATAAAGGGAGAGCCCCAAGGCCCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS CAA 72 bp | GTTCGGCTTGGGCCAGTTCCAAACCACAGACCTTCTTaGCATTCTTGCCCACTCTACTGTGTCCTTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: VRLGPVPNHRPS*HSCPLYCVLSV Trigger: AACAGAAAGGACACAGTAGAGTGGGCAAGAATGCAAAGAAGGTCTGTGGTTTGGAACTGGCCCAAGCCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS CAA 72 bp | GGAGAAGTCACTATCCAGAGTAGGGCTGAGAAGAACTaGGCCCACTTGATAGGGAGCTCTGGAGTCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: GEVTIQSRAEKN*AHLIGSSGVRI Trigger: AATTCTGACTCCAGAGCTCCCTATCAAGTGGGCCAAGTTCTTCTCAGCCCTACTCTGGATAGTGACTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 72 bp | TGGGCCAGTTCCAAACCACAGACCTTCTTTGCATTCTaGCCCACTCTACTGTGTCCTTTCTGTTGGATTTGC | + |
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Preference number: 6 (lower is better) Translates to: WASSKPQTFFAF*PTLLCPFCWIC Trigger: GCAAATCCAACAGAAAGGACACAGTAGAGTGGGCAAGAATGCAAAGAAGGTCTGTGGTTTGGAACTGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS CAA 72 bp | GGGTGCCGGATATTCATTAGGGATCAACACCTGGGTTaGCCCTTGAGGAAGTCATTTTTCCTGAGCCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: GCRIFIRDQHLG*PLRKSFFLSLS Trigger: ACTAAGGCTCAGGAAAAATGACTTCCTCAAGGGCAAACCCAGGTGTTGATCCCTAATGAATATCCGGCACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670227.1 |
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| CDS CAA 90 bp | TGGAATGCGGGGTGCCGGATATTCATTAGGGATCAACACCTGGGTTaGCCCTTGAGGAAGTCATTTTTCCTGAGCCTTAGTTTACTTATC | + |
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Preference number: 6 (lower is better) Translates to: WNAGCRIFIRDQHLG*PLRKSFFLSLSLLI Trigger: GATAAGTAAACTAAGGCTCAGGAAAAATGACTTCCTCAAGGGCAAACCCAGGTGTTGATCCCTAATGAATATCCGGCACCCCGCATTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670227.1 |
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| CDS GCA 72 bp | CTTTGTCTATCACAAGTTGCTAGACCCTGGGCTAAATaGAGGGAACACGCAGATAAAGAGGACACAATCCCT | + |
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Preference number: 6 (lower is better) Translates to: LCLSQVARPWAK*REHADKEDTIP Trigger: AGGGATTGTGTCCTCTTTATCTGCGTGTTCCCTGCATTTAGCCCAGGGTCTAGCAACTTGTGATAGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 90 bp | ACAGACCTTCTTTGCATTCTTGCCCACTCTACTGTGTCCTTTCTGTaGGATTTGCAGAGGAGGATGAGACAGTTTGTGATTGTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: TDLLCILAHSTVSFL*DLQRRMRQFVIVLL Trigger: AAGGAGGACAATCACAAACTGTCTCATCCTCCTCTGCAAATCCAACAGAAAGGACACAGTAGAGTGGGCAAGAATGCAAAGAAGGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 90 bp | AAAAGTTTAGTTCGGCTTGGGCCAGTTCCAAACCACAGACCTTCTTaGCATTCTTGCCCACTCTACTGTGTCCTTTCTGTTGGATTTGCA | + |
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Preference number: 6 (lower is better) Translates to: KSLVRLGPVPNHRPS*HSCPLYCVLSVGFA Trigger: TGCAAATCCAACAGAAAGGACACAGTAGAGTGGGCAAGAATGCAAAGAAGGTCTGTGGTTTGGAACTGGCCCAAGCCGAACTAAACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS CAA 90 bp | GCGGGGTGCCGGATATTCATTAGGGATCAACACCTGGGTTTGCCCTaGAGGAAGTCATTTTTCCTGAGCCTTAGTTTACTTATCTATATG | + |
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Preference number: 6 (lower is better) Translates to: AGCRIFIRDQHLGLP*RKSFFLSLSLLIYM Trigger: CATATAGATAAGTAAACTAAGGCTCAGGAAAAATGACTTCCTCAAGGGCAAACCCAGGTGTTGATCCCTAATGAATATCCGGCACCCCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670227.1 |
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| CDS CCA 72 bp | CTAACACATCTTTGTCTATCACAAGTTGCTAGACCCTaGGCTAAATGCAGGGAACACGCAGATAAAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LTHLCLSQVARP*AKCREHADKED Trigger: GTCCTCTTTATCTGCGTGTTCCCTGCATTTAGCCCAGGGTCTAGCAACTTGTGATAGACAAAGATGTGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 72 bp | CACATGAGGGTAGATGGTTCTCACTCACACGGTTTTTaGGTAGATGAAGCAAAGCCTTTGGAAACAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: HMRVDGSHSHGF*VDEAKPLETDE Trigger: CTCATCTGTTTCCAAAGGCTTTGCTTCATCTACCAAAAAACCGTGTGAGTGAGAACCATCTACCCTCATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 90 bp | CCTGGGCTTGGATGGGCACAGTCTAATAAGGTAAATAATTCTTGGTaGTCTGTCTTCTCCCTAAAACAACTCACAGAACTAGTGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PGLGWAQSNKVNNSW*SVFSLKQLTELVAS Trigger: TGAAGCCACTAGTTCTGTGAGTTGTTTTAGGGAGAAGACAGACAACCAAGAATTATTTACCTTATTAGACTGTGCCCATCCAAGCCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423208.2 ENST00000670227.1 |
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| CDS CAA 90 bp | CTTAATAAGCACATGAGGGTAGATGGTTCTCACTCACACGGTTTTTaGGTAGATGAAGCAAAGCCTTTGGAAACAGATGAGAGTAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LNKHMRVDGSHSHGF*VDEAKPLETDESKG Trigger: TCCCTTACTCTCATCTGTTTCCAAAGGCTTTGCTTCATCTACCAAAAAACCGTGTGAGTGAGAACCATCTACCCTCATGTGCTTATTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 90 bp | AGCAACGGTATAGTAAAAATAGCACAGACAGACCTGGGTTTGCCCTaGAGGAAGTCATTTTTCCTGAGCCTTAGTTTACTTATCTATATG | + |
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Preference number: 6 (lower is better) Translates to: SNGIVKIAQTDLGLP*RKSFFLSLSLLIYM Trigger: CATATAGATAAGTAAACTAAGGCTCAGGAAAAATGACTTCCTCAAGGGCAAACCCAGGTCTGTCTGTGCTATTTTTACTATACCGTTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 90 bp | ACAAATAGCAACGGTATAGTAAAAATAGCACAGACAGACCTGGGTTaGCCCTTGAGGAAGTCATTTTTCCTGAGCCTTAGTTTACTTATC | + |
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Preference number: 6 (lower is better) Translates to: TNSNGIVKIAQTDLG*PLRKSFFLSLSLLI Trigger: GATAAGTAAACTAAGGCTCAGGAAAAATGACTTCCTCAAGGGCAAACCCAGGTCTGTCTGTGCTATTTTTACTATACCGTTGCTATTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS TCA 72 bp | TGGTTACCTGTAACGATTTTTCCTTCCAATAATTCTTaGTTGCTCAAGGCCCTAGTTGAGGGTTTTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: WLPVTIFPSNNS*LLKALVEGFSC Trigger: ACAGGAAAAACCCTCAACTAGGGCCTTGAGCAATCAAGAATTATTGGAAGGAAAAATCGTTACAGGTAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CAA 72 bp | ATAGTAAAAATAGCACAGACAGACCTGGGTTTGCCCTaGAGGAAGTCATTTTTCCTGAGCCTTAGTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: IVKIAQTDLGLP*RKSFFLSLSLL Trigger: AAGTAAACTAAGGCTCAGGAAAAATGACTTCCTCAAGGGCAAACCCAGGTCTGTCTGTGCTATTTTTACTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS TCA 72 bp | GCAGATAAAGAGGACACAATCCCTTTGCTCAAAAAGTaGTTGTTCCATCTGATTTATCAGTGGTTACCTGTA | + |
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Preference number: 6 (lower is better) Translates to: ADKEDTIPLLKK*LFHLIYQWLPV Trigger: TACAGGTAACCACTGATAAATCAGATGGAACAATCACTTTTTGAGCAAAGGGATTGTGTCCTCTTTATCTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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| CDS CCA 72 bp | TTCAGTTGTAAAGCCAGAAGTAAGGTTAAGAACTTTTaGCCTCGTCTTTCTCATTTAGAAGTAAGGAAATTG | + |
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Preference number: 6 (lower is better) Translates to: FSCKARSKVKNF*PRLSHLEVRKL Trigger: CAATTTCCTTACTTCTAAATGAGAAAGACGAGGCCAAAAGTTCTTAACCTTACTTCTGGCTTTACAACTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423208.2 |
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