RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC02521 (Homo sapiens)

Ensembl gene IDs: ENSG00000228718

Ensembl transcript IDs: ENST00000440848.2, ENST00000649361.1

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GAGTGGGGAAGCCGCGTGGTGAGGAAGCCTGGCTCGCACCCGGCCTaGGCTCTCTCGGGCCTGGCCGCATCGGCCACCAGGGGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: EWGSRVVRKPGSHPA*ALSGLAASATRGQC
Trigger: ACACTGCCCCCTGGTGGCCGATGCGGCCAGGCCCGAGAGAGCGCAGGCCGGGTGCGAGCCAGGCTTCCTCACCACGCGGCTTCCCCACTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS TCA 90 bp TTGCTCAGTTACGGTTTCTATGGGATGAGTGGGGAAGCCGCGTGGTaGGGAAGCCTGGCTCGCACCCGGCCTGCGCTCTCTCGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LLSYGFYGMSGEAAW*GSLARTRPALSRAW
Trigger: CCAGGCCCGAGAGAGCGCAGGCCGGGTGCGAGCCAGGCTTCCTCACCACGCGGCTTCCCCACTCATCCCATAGAAACCGTAACTGAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS CCA 90 bp CTGCCCCTGAGGCTGTGGAGTCCTGCTGCCGCAAGCAAGTTCCTCTaGGAAGAAAGCAGCTCACGGCCACACAGGCAGGCTGGCCCTCGA +
Preference number: 5 (lower is better)
Translates to: LPLRLWSPAAASKFL*EESSSRPHRQAGPR
Trigger: TCGAGGGCCAGCCTGCCTGTGTGGCCGTGAGCTGCTTTCTTCCCAGAGGAACTTGCTTGCGGCAGCAGGACTCCACAGCCTCAGGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440848.2
ENST00000649361.1
CDS CCA 90 bp AGGCAGCTCCCCACTTTGCCGAGGCCCAAGCTGCCCCTGAGGCTGTaGAGTCCTGCTGCCGCAAGCAAGTTCCTCTGGGAAGAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: RQLPTLPRPKLPLRL*SPAAASKFLWEESS
Trigger: GCTGCTTTCTTCCCAGAGGAACTTGCTTGCGGCAGCAGGACTCCACAGCCTCAGGGGCAGCTTGGGCCTCGGCAAAGTGGGGAGCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS GCA 90 bp CACTTTGCCGAGGCCCAAGCTGCCCCTGAGGCTGTGGAGTCCTGCTaGCGCAAGCAAGTTCCTCTGGGAAGAAAGCAGCTCACGGCCACA +
Preference number: 5 (lower is better)
Translates to: HFAEAQAAPEAVESC*RKQVPLGRKQLTAT
Trigger: TGTGGCCGTGAGCTGCTTTCTTCCCAGAGGAACTTGCTTGCGGCAGCAGGACTCCACAGCCTCAGGGGCAGCTTGGGCCTCGGCAAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS CCA 90 bp CAAGTTCCTCTGGGAAGAAAGCAGCTCACGGCCACACAGGCAGGCTaGCCCTCGAGGTCACAGCGGGGAGAATCTCTGGGATACTCATTC +
Preference number: 5 (lower is better)
Translates to: QVPLGRKQLTATQAG*PSRSQRGESLGYSF
Trigger: GAATGAGTATCCCAGAGATTCTCCCCGCTGTGACCTCGAGGGCCAGCCTGCCTGTGTGGCCGTGAGCTGCTTTCTTCCCAGAGGAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440848.2
ENST00000649361.1
CDS CCA 90 bp TGTAGTAATCCGTCATTTGCTCAGTTACGGTTTCTATGGGATGAGTaGGGAAGCCGCGTGGTGAGGAAGCCTGGCTCGCACCCGGCCTGC +
Preference number: 5 (lower is better)
Translates to: CSNPSFAQLRFLWDE*GSRVVRKPGSHPAC
Trigger: GCAGGCCGGGTGCGAGCCAGGCTTCCTCACCACGCGGCTTCCCCACTCATCCCATAGAAACCGTAACTGAGCAAATGACGGATTACTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS GCA 90 bp AAGCAGGCAGCTCTACCACCTCGTACTCATCAGGATGGCCTCTCTTaGTCATTAAAGGCTGGGTCAGGCAGCTCTCCAGGCCAACTCTCC +
Preference number: 5 (lower is better)
Translates to: KQAALPPRTHQDGLS*SLKAGSGSSPGQLS
Trigger: GGAGAGTTGGCCTGGAGAGCTGCCTGACCCAGCCTTTAATGAGCAAGAGAGGCCATCCTGATGAGTACGAGGTGGTAGAGCTGCCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CCA 90 bp CCTGCTAAGTGTAGTAATCCGTCATTTGCTCAGTTACGGTTTCTATaGGATGAGTGGGGAAGCCGCGTGGTGAGGAAGCCTGGCTCGCAC +
Preference number: 5 (lower is better)
Translates to: PAKCSNPSFAQLRFL*DEWGSRVVRKPGSH
Trigger: GTGCGAGCCAGGCTTCCTCACCACGCGGCTTCCCCACTCATCCCATAGAAACCGTAACTGAGCAAATGACGGATTACTACACTTAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS CCA 90 bp ATTAATCAAAAAGCAGGCAGCTCTACCACCTCGTACTCATCAGGATaGCCTCTCTTGCTCATTAAAGGCTGGGTCAGGCAGCTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: INQKAGSSTTSYSSG*PLLLIKGWVRQLSR
Trigger: CCTGGAGAGCTGCCTGACCCAGCCTTTAATGAGCAAGAGAGGCCATCCTGATGAGTACGAGGTGGTAGAGCTGCCTGCTTTTTGATTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CCA 90 bp ATTAATCAAAAAGCAGGCAGCTCTACCACCTCGTACTCATCAGGATaGCCTCTTAACAGGGAGGGAAACCCTGACACGCTACAACGTGCA +
Preference number: 5 (lower is better)
Translates to: INQKAGSSTTSYSSG*PLNREGNPDTLQRA
Trigger: TGCACGTTGTAGCGTGTCAGGGTTTCCCTCCCTGTTAAGAGGCCATCCTGATGAGTACGAGGTGGTAGAGCTGCCTGCTTTTTGATTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS CCA 90 bp GGGGGCAGAGCAGAAAGAAGAAGTATAGTAGAGGTTGTGACTCCCTaGGAAGGTGAGGGCTCATGTGAGCCTATACTGAGTAGATACACT +
Preference number: 5 (lower is better)
Translates to: GGRAERRSIVEVVTP*EGEGSCEPILSRYT
Trigger: AGTGTATCTACTCAGTATAGGCTCACATGAGCCCTCACCTTCCCAGGGAGTCACAACCTCTACTATACTTCTTCTTTCTGCTCTGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440848.2
ENST00000649361.1
CDS GCA 72 bp AGCCGCGTGGTGAGGAAGCCTGGCTCGCACCCGGCCTaGGCTCTCTCGGGCCTGGCCGCATCGGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: SRVVRKPGSHPA*ALSGLAASATR
Trigger: CCTGGTGGCCGATGCGGCCAGGCCCGAGAGAGCGCAGGCCGGGTGCGAGCCAGGCTTCCTCACCACGCGGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS TCA 72 bp TACGGTTTCTATGGGATGAGTGGGGAAGCCGCGTGGTaGGGAAGCCTGGCTCGCACCCGGCCTGCGCTCTCT +
Preference number: 6 (lower is better)
Translates to: YGFYGMSGEAAW*GSLARTRPALS
Trigger: AGAGAGCGCAGGCCGGGTGCGAGCCAGGCTTCCTCACCACGCGGCTTCCCCACTCATCCCATAGAAACCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS GCA 72 bp GCCGAGGCCCAAGCTGCCCCTGAGGCTGTGGAGTCCTaGTGCCGCAAGCAAGTTCCTCTGGGAAGAAAGCAG +
Preference number: 6 (lower is better)
Translates to: AEAQAAPEAVES*CRKQVPLGRKQ
Trigger: CTGCTTTCTTCCCAGAGGAACTTGCTTGCGGCAGCAGGACTCCACAGCCTCAGGGGCAGCTTGGGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS CCA 72 bp CCCACTTTGCCGAGGCCCAAGCTGCCCCTGAGGCTGTaGAGTCCTGCTGCCGCAAGCAAGTTCCTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: PTLPRPKLPLRL*SPAAASKFLWE
Trigger: TTCCCAGAGGAACTTGCTTGCGGCAGCAGGACTCCACAGCCTCAGGGGCAGCTTGGGCCTCGGCAAAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS GCA 72 bp GAGGCCCAAGCTGCCCCTGAGGCTGTGGAGTCCTGCTaGCGCAAGCAAGTTCCTCTGGGAAGAAAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: EAQAAPEAVESC*RKQVPLGRKQL
Trigger: GAGCTGCTTTCTTCCCAGAGGAACTTGCTTGCGGCAGCAGGACTCCACAGCCTCAGGGGCAGCTTGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS GCA 72 bp TCTCCAGGCCAACTCTCCTCGGGTGAGCGGGATCCTTaGCACTTCCATCTTGTAGCTGGGCCGTCTGGAGCC +
Preference number: 6 (lower is better)
Translates to: SPGQLSSGERDP*HFHLVAGPSGA
Trigger: GGCTCCAGACGGCCCAGCTACAAGATGGAAGTGGCAAGGATCCCGCTCACCCGAGGAGAGTTGGCCTGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CCA 72 bp AGGCTGTGGAGTCCTGCTGCCGCAAGCAAGTTCCTCTaGGAAGAAAGCAGCTCACGGCCACACAGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: RLWSPAAASKFL*EESSSRPHRQA
Trigger: AGCCTGCCTGTGTGGCCGTGAGCTGCTTTCTTCCCAGAGGAACTTGCTTGCGGCAGCAGGACTCCACAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440848.2
ENST00000649361.1
CDS CCA 72 bp CCGTCATTTGCTCAGTTACGGTTTCTATGGGATGAGTaGGGAAGCCGCGTGGTGAGGAAGCCTGGCTCGCAC +
Preference number: 6 (lower is better)
Translates to: PSFAQLRFLWDE*GSRVVRKPGSH
Trigger: GTGCGAGCCAGGCTTCCTCACCACGCGGCTTCCCCACTCATCCCATAGAAACCGTAACTGAGCAAATGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS GCA 72 bp GCTCTACCACCTCGTACTCATCAGGATGGCCTCTCTTaGTCATTAAAGGCTGGGTCAGGCAGCTCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: ALPPRTHQDGLS*SLKAGSGSSPG
Trigger: GCCTGGAGAGCTGCCTGACCCAGCCTTTAATGAGCAAGAGAGGCCATCCTGATGAGTACGAGGTGGTAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CCA 72 bp GGATCCTTGCCACTTCCATCTTGTAGCTGGGCCGTCTaGAGCCCCTGGCTTCCAGCATTGATCATGGAGGAT +
Preference number: 6 (lower is better)
Translates to: GSLPLPSCSWAV*SPWLPALIMED
Trigger: ATCCTCCATGATCAATGCTGGAAGCCAGGGGCTCCAGACGGCCCAGCTACAAGATGGAAGTGGCAAGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CAA 90 bp AAAGCAGGCAGCTCTACCACCTCGTACTCATCAGGATGGCCTCTCTaGCTCATTAAAGGCTGGGTCAGGCAGCTCTCCAGGCCAACTCTC +
Preference number: 6 (lower is better)
Translates to: KAGSSTTSYSSGWPL*LIKGWVRQLSRPTL
Trigger: GAGAGTTGGCCTGGAGAGCTGCCTGACCCAGCCTTTAATGAGCAAGAGAGGCCATCCTGATGAGTACGAGGTGGTAGAGCTGCCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CAA 72 bp AGCTCTACCACCTCGTACTCATCAGGATGGCCTCTCTaGCTCATTAAAGGCTGGGTCAGGCAGCTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSTTSYSSGWPL*LIKGWVRQLSR
Trigger: CCTGGAGAGCTGCCTGACCCAGCCTTTAATGAGCAAGAGAGGCCATCCTGATGAGTACGAGGTGGTAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CCA 72 bp AAAGCAGGCAGCTCTACCACCTCGTACTCATCAGGATaGCCTCTCTTGCTCATTAAAGGCTGGGTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: KAGSSTTSYSSG*PLLLIKGWVRQ
Trigger: CTGCCTGACCCAGCCTTTAATGAGCAAGAGAGGCCATCCTGATGAGTACGAGGTGGTAGAGCTGCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CAA 90 bp TGCATGAGCCTGGGGGACATCCTGCTAAGTGTAGTAATCCGTCATTaGCTCAGTTACGGTTTCTATGGGATGAGTGGGGAAGCCGCGTGG +
Preference number: 6 (lower is better)
Translates to: CMSLGDILLSVVIRH*LSYGFYGMSGEAAW
Trigger: CCACGCGGCTTCCCCACTCATCCCATAGAAACCGTAACTGAGCAAATGACGGATTACTACACTTAGCAGGATGTCCCCCAGGCTCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS TCA 72 bp AAGCCACTGCATTTGCTTCCTGGGCAGCTCCAAGGGTaGGTTTTCACTTCCATAAGTAGAGCTGAGGAGTCC +
Preference number: 6 (lower is better)
Translates to: KPLHLLPGQLQG*VFTSISRAEES
Trigger: GGACTCCTCAGCTCTACTTATGGAAGTGAAAACTCACCCTTGGAGCTGCCCAGGAAGCAAATGCAGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CCA 72 bp GCAGAAAGAAGAAGTATAGTAGAGGTTGTGACTCCCTaGGAAGGTGAGGGCTCATGTGAGCCTATACTGAGT +
Preference number: 6 (lower is better)
Translates to: AERRSIVEVVTP*EGEGSCEPILS
Trigger: ACTCAGTATAGGCTCACATGAGCCCTCACCTTCCCAGGGAGTCACAACCTCTACTATACTTCTTCTTTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440848.2
ENST00000649361.1
CDS CAA 72 bp CTGGGGGACATCCTGCTAAGTGTAGTAATCCGTCATTaGCTCAGTTACGGTTTCTATGGGATGAGTGGGGAA +
Preference number: 6 (lower is better)
Translates to: LGDILLSVVIRH*LSYGFYGMSGE
Trigger: TTCCCCACTCATCCCATAGAAACCGTAACTGAGCAAATGACGGATTACTACACTTAGCAGGATGTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440848.2
CDS CAA 90 bp GGTCTGAAGGGTTTCCCTTTTCCTTCTGGCCTTGGCTTCTTTTCTTaGCCATTCATGTTCAGGAATAGAGATAATCTCGGCGGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: GLKGFPFPSGLGFFS*PFMFRNRDNLGGEG
Trigger: TCCCTCACCGCCGAGATTATCTCTATTCCTGAACATGAATGGCAAAGAAAAGAAGCCAAGGCCAGAAGGAAAAGGGAAACCCTTCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS GCA 72 bp TCTGGAAATTCTGTCTCAGGTCTTGTGGCATTGTCATaGCCCTTGATGTTTCTGCCCCTTGTTAGGTCGTTT +
Preference number: 6 (lower is better)
Translates to: SGNSVSGLVALS*PLMFLPLVRSF
Trigger: AAACGACCTAACAAGGGGCAGAAACATCAAGGGGCATGACAATGCCACAAGACCTGAGACAGAATTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS TCA 72 bp ATAGAGATAATCTCGGCGGTGAGGGATGTGCCATTTTaGAGATTGTCTCAGCGCAGTTTCTTGTTGGGAACA +
Preference number: 6 (lower is better)
Translates to: IEIISAVRDVPF*RLSQRSFLLGT
Trigger: TGTTCCCAACAAGAAACTGCGCTGAGACAATCTTCAAAATGGCACATCCCTCACCGCCGAGATTATCTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CAA 72 bp AATAGAGATAATCTCGGCGGTGAGGGATGTGCCATTTaGAAGATTGTCTCAGCGCAGTTTCTTGTTGGGAAC +
Preference number: 6 (lower is better)
Translates to: NRDNLGGEGCAI*KIVSAQFLVGN
Trigger: GTTCCCAACAAGAAACTGCGCTGAGACAATCTTCAAAATGGCACATCCCTCACCGCCGAGATTATCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS CAA 90 bp ATGTTCAGGAATAGAGATAATCTCGGCGGTGAGGGATGTGCCATTTaGAAGATTGTCTCAGCGCAGTTTCTTGTTGGGAACATAGATGAT +
Preference number: 6 (lower is better)
Translates to: MFRNRDNLGGEGCAI*KIVSAQFLVGNIDD
Trigger: ATCATCTATGTTCCCAACAAGAAACTGCGCTGAGACAATCTTCAAAATGGCACATCCCTCACCGCCGAGATTATCTCTATTCCTGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS TCA 72 bp GATTGTCTCAGCGCAGTTTCTTGTTGGGAACATAGATaGTTGAGAGCCCGGTGCATTTTTGCTATTTTTAAT +
Preference number: 6 (lower is better)
Translates to: DCLSAVSCWEHR*LRARCIFAIFN
Trigger: ATTAAAAATAGCAAAAATGCACCGGGCTCTCAATCATCTATGTTCCCAACAAGAAACTGCGCTGAGACAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649361.1
CDS TCA 72 bp GTCTCAGCGCAGTTTCTTGTTGGGAACATAGATGATTaGGAGCCCGGTGCATTTTTGCTATTTTTAATTAAA +
Preference number: 6 (lower is better)
Translates to: VSAQFLVGNIDD*EPGAFLLFLIK
Trigger: TTTAATTAAAAATAGCAAAAATGCACCGGGCTCTCAATCATCTATGTTCCCAACAAGAAACTGCGCTGAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649361.1