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Pregenerated sensors for LINC02520 (Homo sapiens)

Ensembl gene IDs: ENSG00000204110

Ensembl transcript IDs: ENST00000570443.2

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CTGGAAGCGCAAAAGCTGTGTTGTCCCTCTGTGCTCTGCTCCTGGTaGCATGCTTGCATATGCATAGAAAATGTCATCTTGATTTGTCCA +
Preference number: 5 (lower is better)
Translates to: LEAQKLCCPSVLCSW*HACICIENVILICP
Trigger: TGGACAAATCAAGATGACATTTTCTATGCATATGCAAGCATGTCACCAGGAGCAGAGCACAGAGGGACAACACAGCTTTTGCGCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS GCA 90 bp AACTCCCAAAATGAAGCGGAGAGATGTGTTGTAAGGAATGGGTGGTaGTCTCGAAGGACAATCAAGGGTTGGAACCAAGAATTGGACCAT +
Preference number: 5 (lower is better)
Translates to: NSQNEAERCVVRNGW*SRRTIKGWNQELDH
Trigger: ATGGTCCAATTCTTGGTTCCAACCCTTGATTGTCCTTCGAGAGCACCACCCATTCCTTACAACACATCTCTCCGCTTCATTTTGGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS CCA 90 bp CAAAACTCCCAAAATGAAGCGGAGAGATGTGTTGTAAGGAATGGGTaGTGCTCTCGAAGGACAATCAAGGGTTGGAACCAAGAATTGGAC +
Preference number: 5 (lower is better)
Translates to: QNSQNEAERCVVRNG*CSRRTIKGWNQELD
Trigger: GTCCAATTCTTGGTTCCAACCCTTGATTGTCCTTCGAGAGCACCACCCATTCCTTACAACACATCTCTCCGCTTCATTTTGGGAGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS CCA 90 bp AAGACGTCTTTGCTGCCAGTCAGCATGATAGAAAAACATGGGTCTTaGAGCCGGGAGGCAGGTTTTAATCCAAACTTGGCCACAATCTTA +
Preference number: 5 (lower is better)
Translates to: KTSLLPVSMIEKHGS*SREAGFNPNLATIL
Trigger: TAAGATTGTGGCCAAGTTTGGATTAAAACCTGCCTCCCGGCTCCAAGACCCATGTTTTTCTATCATGCTGACTGGCAGCAAAGACGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS CCA 72 bp TGCAGGCTCCCTTCTAACTTCTTGATGGGAGCCAGCTaGAAGCGCAAAAGCTGTGTTGTCCCTCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: CRLPSNFLMGAS*KRKSCVVPLCS
Trigger: AGAGCACAGAGGGACAACACAGCTTTTGCGCTTCCAGCTGGCTCCCATCAAGAAGTTAGAAGGGAGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS TCA 72 bp GTCATCTTGATTTGTCCAGGACTCAGAGGTTTCCCGTaGCGTGGGACTTTCATTGCTAAAACTGGGCAGTAC +
Preference number: 6 (lower is better)
Translates to: VILICPGLRGFP*RGTFIAKTGQY
Trigger: GTACTGCCCAGTTTTAGCAATGAAAGTCCCACGTCACGGGAAACCTCTGAGTCCTGGACAAATCAAGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS CAA 90 bp CTCCTGGTGACATGCTTGCATATGCATAGAAAATGTCATCTTGATTaGTCCAGGACTCAGAGGTTTCCCGTGACGTGGGACTTTCATTGC +
Preference number: 6 (lower is better)
Translates to: LLVTCLHMHRKCHLD*SRTQRFPVTWDFHC
Trigger: GCAATGAAAGTCCCACGTCACGGGAAACCTCTGAGTCCTGGACAAATCAAGATGACATTTTCTATGCATATGCAAGCATGTCACCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS GCA 72 bp AATGAAGCGGAGAGATGTGTTGTAAGGAATGGGTGGTaGTCTCGAAGGACAATCAAGGGTTGGAACCAAGAA +
Preference number: 6 (lower is better)
Translates to: NEAERCVVRNGW*SRRTIKGWNQE
Trigger: TTCTTGGTTCCAACCCTTGATTGTCCTTCGAGAGCACCACCCATTCCTTACAACACATCTCTCCGCTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS CCA 72 bp CAAAATGAAGCGGAGAGATGTGTTGTAAGGAATGGGTaGTGCTCTCGAAGGACAATCAAGGGTTGGAACCAA +
Preference number: 6 (lower is better)
Translates to: QNEAERCVVRNG*CSRRTIKGWNQ
Trigger: TTGGTTCCAACCCTTGATTGTCCTTCGAGAGCACCACCCATTCCTTACAACACATCTCTCCGCTTCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS CAA 72 bp ACTTTCATTGCTAAAACTGGGCAGTACCTCCAACCTTaGGATGGCATGAGTCTGGTGCATCTAAGGTCACAT +
Preference number: 6 (lower is better)
Translates to: TFIAKTGQYLQP*DGMSLVHLRSH
Trigger: ATGTGACCTTAGATGCACCAGACTCATGCCATCCAAAGGTTGGAGGTACTGCCCAGTTTTAGCAATGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570443.2
CDS CAA 72 bp ACATGCTTGCATATGCATAGAAAATGTCATCTTGATTaGTCCAGGACTCAGAGGTTTCCCGTGACGTGGGAC +
Preference number: 6 (lower is better)
Translates to: TCLHMHRKCHLD*SRTQRFPVTWD
Trigger: GTCCCACGTCACGGGAAACCTCTGAGTCCTGGACAAATCAAGATGACATTTTCTATGCATATGCAAGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570443.2