Pregenerated sensors for LINC02518 (Homo sapiens)

Ensembl gene IDs: ENSG00000232316

Ensembl transcript IDs: ENST00000421737.1, ENST00000430728.1, ENST00000656121.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCCTCTGCTGAGTCACCATGTGGCCAAGACTGCCACATACTTAGCTaGAGAGAAGTAAAAATCAATTTCCACCTTGTTTTCCTTCAGGAT	+
Preference number: 5 (lower is better) Translates to: SSAESPCGQDCHILS*REVKINFHLVFLQD Trigger: ATCCTGAAGGAAAACAAGGTGGAAATTGATTTTTACTTCTCTGCAGCTAAGTATGTGGCAGTCTTGGCCACATGGTGACTCAGCAGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421737.1 ENST00000656121.1
CDS GCA 90 bp	TCCTCTGCTGAGTCACCATGTGGCCAAGACTGCCACATACTTAGCTaGAGAGAAGTAAAAATCAATTTCCACCAAATTCATGTGCTCAAT	+
Preference number: 5 (lower is better) Translates to: SSAESPCGQDCHILS*REVKINFHQIHVLN Trigger: ATTGAGCACATGAATTTGGTGGAAATTGATTTTTACTTCTCTGCAGCTAAGTATGTGGCAGTCTTGGCCACATGGTGACTCAGCAGAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430728.1
CDS GCA 72 bp	CAAATTCATGTGCTCAATCATTTCTGTCCTCATTGGTaGCAGGACCAGCATAAGTTCTGGGGCTTCAGGCCC	+
Preference number: 6 (lower is better) Translates to: QIHVLNHFCPHW*QDQHKFWGFRP Trigger: GGGCCTGAAGCCCCAGAACTTATGCTGGTCCTGGCACCAATGAGGACAGAAATGATTGAGCACATGAATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430728.1
CDS CAA 90 bp	TGGTCACTGCAGACAGAGATGATTTGGAAAGATGGCAAGCAGTTTTaGATAGCTCCTCAGAGACTCCCCTTGTTAAATGAATATACCTGC	+
Preference number: 6 (lower is better) Translates to: WSLQTEMIWKDGKQF*IAPQRLPLLNEYTC Trigger: GCAGGTATATTCATTTAACAAGGGGAGTCTCTGAGGAGCTATCAAAAACTGCTTGCCATCTTTCCAAATCATCTCTGTCTGCAGTGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656121.1
CDS GCA 72 bp	GAGTCACCATGTGGCCAAGACTGCCACATACTTAGCTaGAGAGAAGTAAAAATCAATTTCCACCTTGTTTTC	+
Preference number: 6 (lower is better) Translates to: ESPCGQDCHILS*REVKINFHLVF Trigger: GAAAACAAGGTGGAAATTGATTTTTACTTCTCTGCAGCTAAGTATGTGGCAGTCTTGGCCACATGGTGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421737.1 ENST00000656121.1
CDS GCA 72 bp	GAGTCACCATGTGGCCAAGACTGCCACATACTTAGCTaGAGAGAAGTAAAAATCAATTTCCACCAAATTCAT	+
Preference number: 6 (lower is better) Translates to: ESPCGQDCHILS*REVKINFHQIH Trigger: ATGAATTTGGTGGAAATTGATTTTTACTTCTCTGCAGCTAAGTATGTGGCAGTCTTGGCCACATGGTGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430728.1
CDS CAA 72 bp	CAGACAGAGATGATTTGGAAAGATGGCAAGCAGTTTTaGATAGCTCCTCAGAGACTCCCCTTGTTAAATGAA	+
Preference number: 6 (lower is better) Translates to: QTEMIWKDGKQF*IAPQRLPLLNE Trigger: TTCATTTAACAAGGGGAGTCTCTGAGGAGCTATCAAAAACTGCTTGCCATCTTTCCAAATCATCTCTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656121.1

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